Welcome to APA
Altered Pathway Analyzer via network connection rewiring
- Predict rewired sub-network or dysregulated or altered pathways from gene expression datasets.
- Calculate TF-mediated differential regulation of each predicted pathway
- Reveal rewired regulatory interactions, i.e. TFs and its TGs, in altered pathways.
- Perform context-specific disease gene enrichment analysis.
- Sub-network analysis for pathway-specific gene prioritization .
Download APA (Version 2.2) (File size: 4.5 MB).
APA has been tested only on linux machine but should also work on windows and Mac machines.
For more information about APA dependencies, its usage and input files format click here
Contact InformationDr. Dinesh Gupta
Team leader, Translational Bioinformatics group
ICGEB, New Delhi, India