BBOV_I000480 | tat-binding protein-like protein

_IDPredictionOTHERSPmTPCS_Position
BBOV_I000480OTHER0.9999000.0000360.000064
No Results

  • Fasta :-

    >BBOV_I000480 MMETETKAGTIQRSEPVNGLLTYYRYRIADYEALLNEKEQTRRRLVAQRNELNAKVRALK DELHALLESGSFVGEVVKQMCQDKVLVKISLEGKYVVDVSKDVDISKCTPSTRVALMSDS YKLHKILPTKVDPLVALMKVEKVPDSTYEMVGGLEQQVKEVKEVIELPIKHPEIFESLGI SQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMARA HAPSIIFMDEIDSIGSQRTDSGHGDSEVQRTMLELLNQLDGFEPYQNIKVIMCTNRIDIL DEALLRPGRIDRKIEFPNPNAEARAQILAIHSRKMNLVRGIDLEMIAREMTNVSGAEVKA VCTEAGMFALRERRVHVTQEDFLMAVAKVMKKDSDKNVSFTKLWK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_I000480.fa Sequence name : BBOV_I000480 Sequence length : 405 VALUES OF COMPUTED PARAMETERS Coef20 : 3.489 CoefTot : 0.000 ChDiff : 1 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.335 0.941 -0.127 0.398 MesoH : -0.661 0.251 -0.381 0.171 MuHd_075 : 18.380 9.860 4.005 3.910 MuHd_095 : 9.626 4.329 2.966 1.342 MuHd_100 : 5.025 0.188 1.584 1.564 MuHd_105 : 7.001 7.281 1.264 2.571 Hmax_075 : 0.525 2.450 -2.958 1.313 Hmax_095 : -3.200 -1.100 -3.416 1.140 Hmax_100 : -3.100 -1.800 -2.349 0.910 Hmax_105 : -2.700 1.700 -3.358 0.630 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9653 0.0347 DFMC : 0.9494 0.0506
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 405 BBOV_I000480 MMETETKAGTIQRSEPVNGLLTYYRYRIADYEALLNEKEQTRRRLVAQRNELNAKVRALKDELHALLESGSFVGEVVKQM 80 CQDKVLVKISLEGKYVVDVSKDVDISKCTPSTRVALMSDSYKLHKILPTKVDPLVALMKVEKVPDSTYEMVGGLEQQVKE 160 VKEVIELPIKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMARA 240 HAPSIIFMDEIDSIGSQRTDSGHGDSEVQRTMLELLNQLDGFEPYQNIKVIMCTNRIDILDEALLRPGRIDRKIEFPNPN 320 AEARAQILAIHSRKMNLVRGIDLEMIAREMTNVSGAEVKAVCTEAGMFALRERRVHVTQEDFLMAVAKVMKKDSDKNVSF 400 TKLWK 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ..... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_I000480 7 MMETETK|AG 0.062 . BBOV_I000480 13 KAGTIQR|SE 0.108 . BBOV_I000480 25 GLLTYYR|YR 0.086 . BBOV_I000480 27 LTYYRYR|IA 0.097 . BBOV_I000480 38 EALLNEK|EQ 0.051 . BBOV_I000480 42 NEKEQTR|RR 0.074 . BBOV_I000480 43 EKEQTRR|RL 0.127 . BBOV_I000480 44 KEQTRRR|LV 0.158 . BBOV_I000480 49 RRLVAQR|NE 0.075 . BBOV_I000480 55 RNELNAK|VR 0.056 . BBOV_I000480 57 ELNAKVR|AL 0.172 . BBOV_I000480 60 AKVRALK|DE 0.155 . BBOV_I000480 78 FVGEVVK|QM 0.061 . BBOV_I000480 84 KQMCQDK|VL 0.063 . BBOV_I000480 88 QDKVLVK|IS 0.060 . BBOV_I000480 94 KISLEGK|YV 0.092 . BBOV_I000480 101 YVVDVSK|DV 0.099 . BBOV_I000480 107 KDVDISK|CT 0.061 . BBOV_I000480 113 KCTPSTR|VA 0.083 . BBOV_I000480 122 LMSDSYK|LH 0.062 . BBOV_I000480 125 DSYKLHK|IL 0.064 . BBOV_I000480 130 HKILPTK|VD 0.059 . BBOV_I000480 139 PLVALMK|VE 0.056 . BBOV_I000480 142 ALMKVEK|VP 0.061 . BBOV_I000480 159 GLEQQVK|EV 0.087 . BBOV_I000480 162 QQVKEVK|EV 0.069 . BBOV_I000480 170 VIELPIK|HP 0.061 . BBOV_I000480 184 LGISQPK|GV 0.082 . BBOV_I000480 196 GPPGTGK|TL 0.059 . BBOV_I000480 201 GKTLLAR|AV 0.134 . BBOV_I000480 213 TDCTFIR|VS 0.131 . BBOV_I000480 222 GSELVQK|YI 0.105 . BBOV_I000480 229 YIGEGSR|MV 0.115 . BBOV_I000480 232 EGSRMVR|EL 0.262 . BBOV_I000480 239 ELFVMAR|AH 0.095 . BBOV_I000480 258 DSIGSQR|TD 0.111 . BBOV_I000480 270 GDSEVQR|TM 0.105 . BBOV_I000480 289 EPYQNIK|VI 0.059 . BBOV_I000480 296 VIMCTNR|ID 0.079 . BBOV_I000480 306 LDEALLR|PG 0.072 . BBOV_I000480 309 ALLRPGR|ID 0.204 . BBOV_I000480 312 RPGRIDR|KI 0.272 . BBOV_I000480 313 PGRIDRK|IE 0.076 . BBOV_I000480 324 NPNAEAR|AQ 0.132 . BBOV_I000480 333 ILAIHSR|KM 0.096 . BBOV_I000480 334 LAIHSRK|MN 0.081 . BBOV_I000480 339 RKMNLVR|GI 0.120 . BBOV_I000480 348 DLEMIAR|EM 0.079 . BBOV_I000480 359 VSGAEVK|AV 0.100 . BBOV_I000480 371 AGMFALR|ER 0.080 . BBOV_I000480 373 MFALRER|RV 0.129 . BBOV_I000480 374 FALRERR|VH 0.347 . BBOV_I000480 388 FLMAVAK|VM 0.063 . BBOV_I000480 391 AVAKVMK|KD 0.074 . BBOV_I000480 392 VAKVMKK|DS 0.152 . BBOV_I000480 396 MKKDSDK|NV 0.079 . BBOV_I000480 402 KNVSFTK|LW 0.065 . BBOV_I000480 405 SFTKLWK|-- 0.062 . ____________________________^_________________

  • Fasta :-

    >BBOV_I000480 AGCTCTAACCCATGGTTCAAGGACTGCTGTTGTATTACCACCGTGATAGATACACATTTT TAAATACTTAACGCCAGCTCACATATGTAATAATTTCTAGTTTATAATAGTTATTCAGCG CTGCAGCAATATTTGGGATCGGAAATATTGTAGTTGTCCACCGAAAGGCAAACGCACTAT TTACACCCAGGTAACTGAAACGTCCTTCATCAAAGATTATAACTAACTTGTTAATTATCG GATATTGTTTTTGTACATGGGTGTCAATTAACGAAGATGATGGAAACGGAGACAAAAGCA GGGACAATCCAAAGAAGTGAACCAGTAAATGGACTCCTTACCTATTATCGCTACCGTATT GCTGATTACGAGGCATTGCTAAATGAAAAGGAGCAAACTAGACGTAGACTTGTAGCACAA AGAAATGAACTAAATGCAAAGGTTAGGGCACTTAAAGACGAACTCCACGCGCTTCTGGAG TCAGGTAGTTTCGTCGGCGAAGTGGTTAAGCAAATGTGCCAAGATAAAGTGCTGGTAAAA ATTAGCCTTGAAGGGAAGTATGTCGTGGATGTCAGCAAGGATGTAGACATTTCTAAATGT ACGCCTAGTACGAGGGTAGCTCTCATGAGTGACTCTTACAAACTTCACAAGATCCTTCCC ACGAAAGTTGATCCCTTGGTTGCTCTTATGAAGGTAGAAAAGGTTCCCGACTCCACATAT GAAATGGTTGGTGGACTGGAGCAACAAGTGAAAGAGGTAAAAGAAGTTATAGAATTGCCT ATTAAGCACCCCGAAATATTTGAATCTCTTGGTATTTCACAGCCCAAAGGAGTGCTGCTT TACGGTCCTCCTGGAACAGGAAAAACACTTTTAGCTAGAGCTGTTGCACACCATACAGAT TGCACATTCATTAGGGTCAGTGGTTCAGAACTGGTACAGAAATACATCGGAGAAGGTAGT AGAATGGTTAGGGAGTTGTTTGTTATGGCAAGGGCACATGCTCCTTCGATCATCTTTATG GATGAAATAGACTCTATAGGTTCACAGAGAACTGATAGTGGTCATGGAGATTCGGAAGTT CAGAGAACTATGCTAGAGCTGTTGAACCAACTCGATGGTTTTGAACCGTATCAGAATATT AAAGTTATTATGTGTACTAATCGCATAGACATCTTGGACGAAGCTCTGCTTAGACCAGGC AGGATCGATCGGAAAATAGAATTTCCAAATCCTAATGCTGAAGCTAGAGCTCAAATTCTA GCCATCCACAGTAGAAAGATGAATCTCGTAAGGGGTATAGACTTAGAAATGATCGCACGT GAAATGACAAATGTGAGTGGTGCTGAGGTTAAGGCTGTCTGTACCGAAGCAGGGATGTTC GCACTTCGTGAACGCAGAGTACACGTTACTCAAGAAGACTTTTTAATGGCTGTTGCCAAG GTAATGAAGAAAGACTCGGATAAGAATGTAAGCTTCACGAAATTGTGGAAGTGA
  • Download Fasta

  • Fasta :-

    MMETETKAGTIQRSEPVNGLLTYYRYRIADYEALLNEKEQTRRRLVAQRNELNAKVRALK DELHALLESGSFVGEVVKQMCQDKVLVKISLEGKYVVDVSKDVDISKCTPSTRVALMSDS YKLHKILPTKVDPLVALMKVEKVPDSTYEMVGGLEQQVKEVKEVIELPIKHPEIFESLGI SQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMARA HAPSIIFMDEIDSIGSQRTDSGHGDSEVQRTMLELLNQLDGFEPYQNIKVIMCTNRIDIL DEALLRPGRIDRKIEFPNPNAEARAQILAIHSRKMNLVRGIDLEMIAREMTNVSGAEVKA VCTEAGMFALRERRVHVTQEDFLMAVAKVMKKDSDKNVSFTKLWK

  • title: ATP binding site
  • coordinates: P191,P192,G193,T194,G195,K196,T197,L198,D249,N295
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
BBOV_I000480261 SQRTDSGHGD0.993unspBBOV_I000480261 SQRTDSGHGD0.993unspBBOV_I000480261 SQRTDSGHGD0.993unspBBOV_I000480146 SKVPDSTYEM0.996unspBBOV_I000480215 SFIRVSGSEL0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India