BBOV_I000540 | preprocathepsin c precursor, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
BBOV_I000540OTHER0.9983500.0003950.001255
No Results

  • Fasta :-

    >BBOV_I000540 MQSDVLGLWRIYETGSFHEKPQSCGGSLPNRNVDNLKLGDYRAYLENHYGKLNETVIELV DERYHRRSEAPPRNQWLYLGVRNPKEGQGVIGKWTMVYDEGLDIELGTTHYFGFFKYNKI NSSSCPMIMEGSQEDSQGRVACYRTKASEIGIGWASRKIINNGRITYLYGCFYAEKIKKD ERHSYVLDATAAATPSKSKPSSNMWVKKEYSQFTDLSPYRFLQLHKGVSYRSIHHCHMNK PAMDTNSALPRFLQEDKYHLYACEHARNSGDYYSNLALPRQWSWGDAFNGDADNFQTFGQ GQCGSCYAMAGIYVLTKRIEIMMKKLYPGIDFGEVSIPSVQDMLECSPFNQGCYGGFPFL VGKHLTEFGVLSEDKSPYRMSNGGAVDTCSVDVLDPSERWYASGYGYVGGCYECTSELEI MREVYHNGPVAVALDAPQSLFQYSSGIYDDNPSNHGATCDLPHSGLNGWEYTNHAIAIVG WGEDEIDGIITKYWICKNTWGNDWGVGGFFKIKRGVNQCGIETQAVYIDPDLTRGIAAAL IHGGAA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_I000540.fa Sequence name : BBOV_I000540 Sequence length : 546 VALUES OF COMPUTED PARAMETERS Coef20 : 3.475 CoefTot : -0.043 ChDiff : -11 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.888 1.000 0.160 0.497 MesoH : -0.231 0.319 -0.250 0.263 MuHd_075 : 18.945 13.261 6.531 3.088 MuHd_095 : 12.367 8.790 4.733 3.736 MuHd_100 : 14.728 9.016 3.896 4.059 MuHd_105 : 16.798 9.748 3.168 4.436 Hmax_075 : 8.575 11.083 -0.002 3.544 Hmax_095 : 5.338 5.425 -0.894 3.666 Hmax_100 : 11.600 9.200 0.260 4.210 Hmax_105 : 6.900 3.800 -1.435 3.540 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9333 0.0667 DFMC : 0.9167 0.0833
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 546 BBOV_I000540 MQSDVLGLWRIYETGSFHEKPQSCGGSLPNRNVDNLKLGDYRAYLENHYGKLNETVIELVDERYHRRSEAPPRNQWLYLG 80 VRNPKEGQGVIGKWTMVYDEGLDIELGTTHYFGFFKYNKINSSSCPMIMEGSQEDSQGRVACYRTKASEIGIGWASRKII 160 NNGRITYLYGCFYAEKIKKDERHSYVLDATAAATPSKSKPSSNMWVKKEYSQFTDLSPYRFLQLHKGVSYRSIHHCHMNK 240 PAMDTNSALPRFLQEDKYHLYACEHARNSGDYYSNLALPRQWSWGDAFNGDADNFQTFGQGQCGSCYAMAGIYVLTKRIE 320 IMMKKLYPGIDFGEVSIPSVQDMLECSPFNQGCYGGFPFLVGKHLTEFGVLSEDKSPYRMSNGGAVDTCSVDVLDPSERW 400 YASGYGYVGGCYECTSELEIMREVYHNGPVAVALDAPQSLFQYSSGIYDDNPSNHGATCDLPHSGLNGWEYTNHAIAIVG 480 WGEDEIDGIITKYWICKNTWGNDWGVGGFFKIKRGVNQCGIETQAVYIDPDLTRGIAAALIHGGAA 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 .................................................................. 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_I000540 10 DVLGLWR|IY 0.087 . BBOV_I000540 20 TGSFHEK|PQ 0.085 . BBOV_I000540 31 GGSLPNR|NV 0.129 . BBOV_I000540 37 RNVDNLK|LG 0.056 . BBOV_I000540 42 LKLGDYR|AY 0.074 . BBOV_I000540 51 LENHYGK|LN 0.081 . BBOV_I000540 63 IELVDER|YH 0.081 . BBOV_I000540 66 VDERYHR|RS 0.191 . BBOV_I000540 67 DERYHRR|SE 0.196 . BBOV_I000540 73 RSEAPPR|NQ 0.096 . BBOV_I000540 82 WLYLGVR|NP 0.075 . BBOV_I000540 85 LGVRNPK|EG 0.106 . BBOV_I000540 93 GQGVIGK|WT 0.072 . BBOV_I000540 116 HYFGFFK|YN 0.063 . BBOV_I000540 119 GFFKYNK|IN 0.066 . BBOV_I000540 139 QEDSQGR|VA 0.085 . BBOV_I000540 144 GRVACYR|TK 0.098 . BBOV_I000540 146 VACYRTK|AS 0.078 . BBOV_I000540 157 GIGWASR|KI 0.098 . BBOV_I000540 158 IGWASRK|II 0.105 . BBOV_I000540 164 KIINNGR|IT 0.084 . BBOV_I000540 176 GCFYAEK|IK 0.064 . BBOV_I000540 178 FYAEKIK|KD 0.060 . BBOV_I000540 179 YAEKIKK|DE 0.103 . BBOV_I000540 182 KIKKDER|HS 0.082 . BBOV_I000540 197 AAATPSK|SK 0.082 . BBOV_I000540 199 ATPSKSK|PS 0.062 . BBOV_I000540 207 SSNMWVK|KE 0.071 . BBOV_I000540 208 SNMWVKK|EY 0.181 . BBOV_I000540 220 TDLSPYR|FL 0.088 . BBOV_I000540 226 RFLQLHK|GV 0.071 . BBOV_I000540 231 HKGVSYR|SI 0.294 . BBOV_I000540 240 HHCHMNK|PA 0.074 . BBOV_I000540 251 TNSALPR|FL 0.132 . BBOV_I000540 257 RFLQEDK|YH 0.057 . BBOV_I000540 267 YACEHAR|NS 0.133 . BBOV_I000540 280 SNLALPR|QW 0.110 . BBOV_I000540 317 GIYVLTK|RI 0.069 . BBOV_I000540 318 IYVLTKR|IE 0.115 . BBOV_I000540 324 RIEIMMK|KL 0.076 . BBOV_I000540 325 IEIMMKK|LY 0.093 . BBOV_I000540 363 FPFLVGK|HL 0.068 . BBOV_I000540 375 GVLSEDK|SP 0.067 . BBOV_I000540 379 EDKSPYR|MS 0.091 . BBOV_I000540 399 VLDPSER|WY 0.082 . BBOV_I000540 422 SELEIMR|EV 0.109 . BBOV_I000540 492 IDGIITK|YW 0.068 . BBOV_I000540 497 TKYWICK|NT 0.076 . BBOV_I000540 511 GVGGFFK|IK 0.067 . BBOV_I000540 513 GGFFKIK|RG 0.057 . BBOV_I000540 514 GFFKIKR|GV 0.348 . BBOV_I000540 534 IDPDLTR|GI 0.116 . ____________________________^_________________

  • Fasta :-

    >BBOV_I000540 ATGCAGAGTGATGTACTTGGCCTTTGGCGCATCTACGAGACTGGTAGTTTCCATGAGAAG CCTCAATCTTGTGGCGGCTCTTTGCCCAATCGCAATGTGGATAACTTGAAGTTAGGTGAC TATAGAGCCTATTTAGAGAATCACTATGGAAAGTTGAATGAGACTGTCATCGAGTTGGTT GATGAACGTTACCACCGTCGTAGCGAGGCTCCTCCACGCAACCAATGGCTTTACTTGGGT GTTAGAAACCCTAAGGAAGGCCAGGGTGTCATTGGGAAGTGGACCATGGTATATGACGAA GGTTTAGACATTGAACTTGGTACAACGCATTATTTTGGTTTCTTTAAATATAATAAGATC AACAGTTCATCATGTCCAATGATTATGGAAGGATCGCAGGAGGATTCGCAAGGCAGAGTG GCTTGTTACAGGACAAAGGCATCTGAAATAGGCATTGGTTGGGCTAGTCGTAAGATTATT AATAATGGTCGTATAACTTATTTATACGGTTGTTTTTATGCGGAGAAGATAAAGAAGGAT GAACGTCATTCTTACGTCCTTGATGCAACTGCTGCTGCCACTCCTTCAAAGAGTAAACCT AGTTCAAATATGTGGGTCAAGAAGGAGTATTCTCAATTTACTGATCTATCCCCTTATCGT TTTCTGCAGCTTCACAAGGGCGTTTCCTACAGAAGCATTCATCATTGTCACATGAACAAG CCTGCTATGGACACTAATAGTGCTTTGCCACGATTTTTGCAGGAAGACAAATATCATCTG TATGCTTGTGAGCATGCAAGGAATTCCGGTGATTACTATAGCAATTTAGCTCTACCTCGC CAATGGTCTTGGGGTGATGCATTCAATGGTGATGCTGATAATTTCCAAACTTTCGGTCAA GGCCAATGTGGTAGTTGTTACGCCATGGCAGGTATATATGTACTGACTAAGCGCATAGAG ATCATGATGAAGAAGCTTTATCCTGGCATTGACTTTGGAGAGGTATCAATACCTTCGGTA CAGGACATGTTAGAATGTTCTCCTTTTAACCAAGGATGTTATGGCGGCTTTCCATTCCTC GTTGGGAAGCATTTAACTGAATTTGGTGTCCTTTCTGAAGATAAATCGCCTTATAGGATG TCAAATGGCGGCGCAGTTGATACCTGTTCAGTTGATGTATTAGACCCTTCTGAGCGTTGG TATGCCTCTGGGTATGGCTACGTAGGTGGCTGTTATGAGTGTACTTCGGAGTTAGAGATT ATGCGTGAAGTATACCACAACGGACCGGTAGCTGTTGCTCTAGATGCTCCTCAGAGTCTG TTCCAGTACAGTTCAGGGATATATGATGATAATCCTAGTAATCACGGTGCCACTTGCGAC CTACCTCATTCCGGCTTAAATGGTTGGGAGTACACTAACCACGCTATCGCAATCGTCGGT TGGGGTGAGGACGAGATTGATGGAATCATTACTAAATACTGGATATGTAAAAATACTTGG GGTAATGATTGGGGCGTTGGTGGATTTTTCAAAATTAAGCGTGGAGTTAACCAGTGTGGT ATAGAAACTCAAGCTGTTTACATCGACCCCGATCTAACTCGTGGCATTGCAGCTGCTCTA ATTCACGGCGGAGCGGCATAG
  • Download Fasta

  • Fasta :-

    MQSDVLGLWRIYETGSFHEKPQSCGGSLPNRNVDNLKLGDYRAYLENHYGKLNETVIELV DERYHRRSEAPPRNQWLYLGVRNPKEGQGVIGKWTMVYDEGLDIELGTTHYFGFFKYNKI NSSSCPMIMEGSQEDSQGRVACYRTKASEIGIGWASRKIINNGRITYLYGCFYAEKIKKD ERHSYVLDATAAATPSKSKPSSNMWVKKEYSQFTDLSPYRFLQLHKGVSYRSIHHCHMNK PAMDTNSALPRFLQEDKYHLYACEHARNSGDYYSNLALPRQWSWGDAFNGDADNFQTFGQ GQCGSCYAMAGIYVLTKRIEIMMKKLYPGIDFGEVSIPSVQDMLECSPFNQGCYGGFPFL VGKHLTEFGVLSEDKSPYRMSNGGAVDTCSVDVLDPSERWYASGYGYVGGCYECTSELEI MREVYHNGPVAVALDAPQSLFQYSSGIYDDNPSNHGATCDLPHSGLNGWEYTNHAIAIVG WGEDEIDGIITKYWICKNTWGNDWGVGGFFKIKRGVNQCGIETQAVYIDPDLTRGIAAAL IHGGAA

  • title: active site
  • coordinates: Q300,C306,H474,N498
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
BBOV_I000540184 SDERHSYVLD0.991unspBBOV_I000540184 SDERHSYVLD0.991unspBBOV_I000540184 SDERHSYVLD0.991unspBBOV_I000540283 SPRQWSWGDA0.995unspBBOV_I000540376 SSEDKSPYRM0.991unspBBOV_I00054068 SYHRRSEAPP0.995unspBBOV_I000540132 SIMEGSQEDS0.99unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India