BBOV_II000170 | cathepsin C precursor, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
BBOV_II000170SP0.0851710.9145680.000261CS pos: 32-33. VTA-DL. Pr: 0.6673
No Results

  • Fasta :-

    >BBOV_II000170 MLDRAPNCEHVITMVLLLFFVQLILGICHVTADLPIHVLVKDVTGKWQFYLTKPLGGLDV MCGSSMPNTLEGNLKLGNYLDYLKSHYTLDRNFQLELSLDVIPYSDTSNKPNRYKWRALA VKDAAGKVVGRWTIVNDQGFEVLLDDSTRYFFYIRYTQNGDMFETDPNHTQIGWAYRPGN LSAAVTERRCAFASKVNALTPPQTTLVKLHTNVTEMFKQIDRSITNNGTSHGAIKSAHIS PKRGLYPCECANKERLHFDDQLPVHFEWKTRATIPIVNQDSCGSCHAIASRYVLQSRFLI ALERMSNRSPELEGILDELSHYTFDPKDVTDCSMYNQGCDGGYPYLMGKQMREFGILTTK NAGQQCTLLSTERRYFARDYGYVGGCHQCTACQGDALIMREILANGPVVTAIDAAVLTAD YDGHIITSAEEGTNSGICDMEHHPILTGWEYTSHAVAIVGWGQEKVGARMIKYWICRNSW GQNWGINGHFKIERGKNAYGIESEAVFIDPDFSKFAQEPAASFLHTIHHH
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_II000170.fa Sequence name : BBOV_II000170 Sequence length : 530 VALUES OF COMPUTED PARAMETERS Coef20 : 4.246 CoefTot : 0.122 ChDiff : -7 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.353 2.824 0.502 0.919 MesoH : 0.170 0.774 -0.206 0.374 MuHd_075 : 25.020 15.850 5.394 6.060 MuHd_095 : 12.898 8.944 4.779 2.355 MuHd_100 : 15.967 16.376 7.128 3.489 MuHd_105 : 22.363 23.114 9.070 5.357 Hmax_075 : 10.938 15.000 1.122 5.140 Hmax_095 : 8.313 16.600 2.229 4.524 Hmax_100 : 7.500 16.600 2.229 4.410 Hmax_105 : 7.300 17.100 2.569 5.343 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9654 0.0346 DFMC : 0.9793 0.0207
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 530 BBOV_II000170 MLDRAPNCEHVITMVLLLFFVQLILGICHVTADLPIHVLVKDVTGKWQFYLTKPLGGLDVMCGSSMPNTLEGNLKLGNYL 80 DYLKSHYTLDRNFQLELSLDVIPYSDTSNKPNRYKWRALAVKDAAGKVVGRWTIVNDQGFEVLLDDSTRYFFYIRYTQNG 160 DMFETDPNHTQIGWAYRPGNLSAAVTERRCAFASKVNALTPPQTTLVKLHTNVTEMFKQIDRSITNNGTSHGAIKSAHIS 240 PKRGLYPCECANKERLHFDDQLPVHFEWKTRATIPIVNQDSCGSCHAIASRYVLQSRFLIALERMSNRSPELEGILDELS 320 HYTFDPKDVTDCSMYNQGCDGGYPYLMGKQMREFGILTTKNAGQQCTLLSTERRYFARDYGYVGGCHQCTACQGDALIMR 400 EILANGPVVTAIDAAVLTADYDGHIITSAEEGTNSGICDMEHHPILTGWEYTSHAVAIVGWGQEKVGARMIKYWICRNSW 480 GQNWGINGHFKIERGKNAYGIESEAVFIDPDFSKFAQEPAASFLHTIHHH 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 .................................................. 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_II000170 4 ---MLDR|AP 0.074 . BBOV_II000170 41 PIHVLVK|DV 0.095 . BBOV_II000170 46 VKDVTGK|WQ 0.062 . BBOV_II000170 53 WQFYLTK|PL 0.075 . BBOV_II000170 75 TLEGNLK|LG 0.056 . BBOV_II000170 84 NYLDYLK|SH 0.061 . BBOV_II000170 91 SHYTLDR|NF 0.082 . BBOV_II000170 110 YSDTSNK|PN 0.061 . BBOV_II000170 113 TSNKPNR|YK 0.173 . BBOV_II000170 115 NKPNRYK|WR 0.064 . BBOV_II000170 117 PNRYKWR|AL 0.135 . BBOV_II000170 122 WRALAVK|DA 0.092 . BBOV_II000170 127 VKDAAGK|VV 0.069 . BBOV_II000170 131 AGKVVGR|WT 0.105 . BBOV_II000170 149 LLDDSTR|YF 0.106 . BBOV_II000170 155 RYFFYIR|YT 0.100 . BBOV_II000170 177 QIGWAYR|PG 0.077 . BBOV_II000170 188 SAAVTER|RC 0.080 . BBOV_II000170 189 AAVTERR|CA 0.185 . BBOV_II000170 195 RCAFASK|VN 0.062 . BBOV_II000170 208 PQTTLVK|LH 0.059 . BBOV_II000170 218 NVTEMFK|QI 0.066 . BBOV_II000170 222 MFKQIDR|SI 0.134 . BBOV_II000170 235 TSHGAIK|SA 0.140 . BBOV_II000170 242 SAHISPK|RG 0.060 . BBOV_II000170 243 AHISPKR|GL 0.206 . BBOV_II000170 253 PCECANK|ER 0.055 . BBOV_II000170 255 ECANKER|LH 0.090 . BBOV_II000170 269 PVHFEWK|TR 0.061 . BBOV_II000170 271 HFEWKTR|AT 0.134 . BBOV_II000170 291 CHAIASR|YV 0.150 . BBOV_II000170 297 RYVLQSR|FL 0.122 . BBOV_II000170 304 FLIALER|MS 0.080 . BBOV_II000170 308 LERMSNR|SP 0.130 . BBOV_II000170 327 HYTFDPK|DV 0.079 . BBOV_II000170 349 YPYLMGK|QM 0.062 . BBOV_II000170 352 LMGKQMR|EF 0.126 . BBOV_II000170 360 FGILTTK|NA 0.074 . BBOV_II000170 373 TLLSTER|RY 0.073 . BBOV_II000170 374 LLSTERR|YF 0.166 . BBOV_II000170 378 ERRYFAR|DY 0.302 . BBOV_II000170 400 GDALIMR|EI 0.104 . BBOV_II000170 465 VGWGQEK|VG 0.057 . BBOV_II000170 469 QEKVGAR|MI 0.099 . BBOV_II000170 472 VGARMIK|YW 0.151 . BBOV_II000170 477 IKYWICR|NS 0.103 . BBOV_II000170 491 GINGHFK|IE 0.071 . BBOV_II000170 494 GHFKIER|GK 0.101 . BBOV_II000170 496 FKIERGK|NA 0.076 . BBOV_II000170 514 IDPDFSK|FA 0.072 . ____________________________^_________________

  • Fasta :-

    >BBOV_II000170 GAAATGCTGTTATTCCAATAGTATTATGCTCGACAGAGCACCTAACTGTGAACATGTAAT CACTATGGTATTACTTTTGTTTTTTGTGCAGTTGATACTTGGCATATGCCATGTCACTGC AGATCTGCCCATCCACGTGTTGGTAAAAGATGTAACCGGAAAATGGCAATTTTACCTAAC GAAGCCCCTAGGAGGGCTGGATGTCATGTGCGGCTCATCGATGCCAAATACTTTGGAAGG GAATTTGAAGCTTGGAAATTACCTTGATTACCTGAAGTCACATTACACTCTGGATCGCAA TTTTCAATTAGAACTTTCGTTGGATGTAATCCCCTATTCTGACACCAGTAATAAGCCGAA TAGATACAAATGGCGTGCATTAGCCGTAAAGGATGCCGCTGGTAAAGTTGTCGGCAGATG GACCATTGTTAATGATCAAGGTTTTGAAGTTTTGCTTGACGATTCTACGCGCTACTTTTT TTATATACGTTATACGCAGAATGGAGACATGTTTGAAACTGATCCCAATCATACTCAGAT TGGTTGGGCATACAGGCCTGGCAACCTTTCTGCAGCAGTTACAGAACGGAGATGCGCGTT TGCATCTAAGGTGAATGCTCTGACTCCACCGCAAACCACCCTTGTGAAGCTGCATACAAA TGTTACGGAGATGTTCAAGCAGATTGATCGGTCGATAACTAATAATGGTACGAGCCACGG TGCAATTAAGTCGGCGCACATATCACCTAAACGTGGGTTATATCCATGTGAATGCGCGAA TAAAGAACGTCTTCACTTTGATGACCAACTCCCTGTACACTTCGAGTGGAAAACTAGGGC AACAATTCCTATCGTAAATCAAGACTCTTGTGGTAGTTGCCACGCAATAGCTTCTAGATA CGTGCTACAGTCGAGATTCTTGATTGCCCTAGAGCGCATGTCTAACCGCAGTCCAGAGTT GGAAGGCATTCTTGACGAGCTTTCTCACTACACATTCGACCCCAAAGACGTCACTGACTG TAGTATGTACAATCAAGGGTGCGATGGCGGCTATCCTTACCTTATGGGTAAGCAAATGCG CGAGTTTGGTATATTGACTACAAAAAATGCTGGTCAACAGTGTACCCTACTCAGTACTGA GCGTCGCTACTTCGCCAGAGATTACGGTTACGTAGGCGGTTGCCACCAATGCACAGCTTG CCAAGGTGACGCACTTATAATGCGTGAGATATTAGCAAATGGCCCTGTTGTTACGGCCAT TGATGCAGCTGTGCTTACCGCGGACTATGACGGCCACATAATCACGTCGGCGGAAGAAGG TACGAATTCAGGCATATGTGACATGGAACATCATCCAATACTAACTGGATGGGAATATAC TTCTCATGCGGTTGCAATTGTTGGTTGGGGCCAGGAGAAGGTTGGTGCCCGTATGATCAA ATATTGGATCTGTCGCAACAGTTGGGGCCAAAATTGGGGTATAAATGGTCACTTTAAGAT CGAGCGCGGAAAGAACGCGTATGGCATAGAAAGTGAGGCCGTGTTTATCGACCCTGATTT TTCCAAGTTTGCGCAAGAGCCGGCCGCCTCCTTCTTACACACGATTCACCACCATTAACA AAAATA
  • Download Fasta

  • Fasta :-

    MLDRAPNCEHVITMVLLLFFVQLILGICHVTADLPIHVLVKDVTGKWQFYLTKPLGGLDV MCGSSMPNTLEGNLKLGNYLDYLKSHYTLDRNFQLELSLDVIPYSDTSNKPNRYKWRALA VKDAAGKVVGRWTIVNDQGFEVLLDDSTRYFFYIRYTQNGDMFETDPNHTQIGWAYRPGN LSAAVTERRCAFASKVNALTPPQTTLVKLHTNVTEMFKQIDRSITNNGTSHGAIKSAHIS PKRGLYPCECANKERLHFDDQLPVHFEWKTRATIPIVNQDSCGSCHAIASRYVLQSRFLI ALERMSNRSPELEGILDELSHYTFDPKDVTDCSMYNQGCDGGYPYLMGKQMREFGILTTK NAGQQCTLLSTERRYFARDYGYVGGCHQCTACQGDALIMREILANGPVVTAIDAAVLTAD YDGHIITSAEEGTNSGICDMEHHPILTGWEYTSHAVAIVGWGQEKVGARMIKYWICRNSW GQNWGINGHFKIERGKNAYGIESEAVFIDPDFSKFAQEPAASFLHTIHHH

  • title: active site
  • coordinates: Q279,C285,H454,N478
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
BBOV_II000170306 SLERMSNRSP0.995unspBBOV_II000170306 SLERMSNRSP0.995unspBBOV_II000170306 SLERMSNRSP0.995unspBBOV_II000170309 SMSNRSPELE0.993unspBBOV_II000170108 SYSDTSNKPN0.992unspBBOV_II000170240 SSAHISPKRG0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India