BBOV_II000230 | putative serine esterase domain containing protein

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_IDPredictionOTHERSPmTPCS_Position
BBOV_II000230OTHER0.9995600.0003650.000075
No Results

  • Fasta :-

    >BBOV_II000230 MEDSAQITRILCYHCKRAVSDKSCFAGEVIHVDEMKAKHSAKEYWQVVSDQVVKEKNRAQ ALATLFSSKVVEIFKFLGKTLVDIPINMENSKEMQFDLFSMPPSIRMCQECLCFFSIERS CHCESCMGPDHISHYVVLMHGVVADPLCMAFIAQSLLEVYPHLFIYFPHKIAGKSLVGLE LVVKTIGTELLELFSKIPRKIKLSIIGHSFGGVILRHWYFFYSRKTPGIHHYPKYSSASG STGEDSTIKQDGAEDENPREVPEIIWCNYMSVASPHAGIYENNAAFRKIVGLVGSKTVDE LDNDSVDLLFLASRESMDGMKKFKNVVVYGNLSGDFLVAPRTSLLMPRHRVAGKMVKSFI KYAEKDTGEPHSIWDMLSKCDFTQVGSDDESDSDVESSGSFDKDCIMAKLMESFYATVAS LIKKTQHLAMFTGKPYEPVNGESNEDLCKRYFTFDDLEFFKMLFSQIEDKSSKKLLSRLA ASPKLLYNEVLLTALWDMAPNKYAVYLPTLSLPHRSILTPLEGSLWHKYTNKVLPQIASI FIT
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_II000230.fa Sequence name : BBOV_II000230 Sequence length : 543 VALUES OF COMPUTED PARAMETERS Coef20 : 4.324 CoefTot : 0.000 ChDiff : -5 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.376 1.935 0.197 0.665 MesoH : 0.176 0.923 -0.145 0.411 MuHd_075 : 22.578 13.244 4.624 4.006 MuHd_095 : 36.149 20.009 11.441 6.932 MuHd_100 : 45.745 23.820 12.955 7.904 MuHd_105 : 43.617 22.279 11.340 7.374 Hmax_075 : 10.267 12.833 2.321 3.733 Hmax_095 : 3.200 10.400 2.701 3.510 Hmax_100 : 14.700 13.000 4.436 3.820 Hmax_105 : 10.238 8.575 1.236 3.130 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7644 0.2356 DFMC : 0.7628 0.2372
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 543 BBOV_II000230 MEDSAQITRILCYHCKRAVSDKSCFAGEVIHVDEMKAKHSAKEYWQVVSDQVVKEKNRAQALATLFSSKVVEIFKFLGKT 80 LVDIPINMENSKEMQFDLFSMPPSIRMCQECLCFFSIERSCHCESCMGPDHISHYVVLMHGVVADPLCMAFIAQSLLEVY 160 PHLFIYFPHKIAGKSLVGLELVVKTIGTELLELFSKIPRKIKLSIIGHSFGGVILRHWYFFYSRKTPGIHHYPKYSSASG 240 STGEDSTIKQDGAEDENPREVPEIIWCNYMSVASPHAGIYENNAAFRKIVGLVGSKTVDELDNDSVDLLFLASRESMDGM 320 KKFKNVVVYGNLSGDFLVAPRTSLLMPRHRVAGKMVKSFIKYAEKDTGEPHSIWDMLSKCDFTQVGSDDESDSDVESSGS 400 FDKDCIMAKLMESFYATVASLIKKTQHLAMFTGKPYEPVNGESNEDLCKRYFTFDDLEFFKMLFSQIEDKSSKKLLSRLA 480 ASPKLLYNEVLLTALWDMAPNKYAVYLPTLSLPHRSILTPLEGSLWHKYTNKVLPQIASIFIT 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ............................................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_II000230 9 DSAQITR|IL 0.080 . BBOV_II000230 16 ILCYHCK|RA 0.065 . BBOV_II000230 17 LCYHCKR|AV 0.306 . BBOV_II000230 22 KRAVSDK|SC 0.209 . BBOV_II000230 36 IHVDEMK|AK 0.069 . BBOV_II000230 38 VDEMKAK|HS 0.082 . BBOV_II000230 42 KAKHSAK|EY 0.096 . BBOV_II000230 54 VSDQVVK|EK 0.060 . BBOV_II000230 56 DQVVKEK|NR 0.074 . BBOV_II000230 58 VVKEKNR|AQ 0.073 . BBOV_II000230 69 ATLFSSK|VV 0.070 . BBOV_II000230 75 KVVEIFK|FL 0.078 . BBOV_II000230 79 IFKFLGK|TL 0.063 . BBOV_II000230 92 INMENSK|EM 0.063 . BBOV_II000230 106 SMPPSIR|MC 0.091 . BBOV_II000230 119 CFFSIER|SC 0.091 . BBOV_II000230 170 FIYFPHK|IA 0.098 . BBOV_II000230 174 PHKIAGK|SL 0.077 . BBOV_II000230 184 GLELVVK|TI 0.075 . BBOV_II000230 196 LLELFSK|IP 0.060 . BBOV_II000230 199 LFSKIPR|KI 0.096 . BBOV_II000230 200 FSKIPRK|IK 0.089 . BBOV_II000230 202 KIPRKIK|LS 0.121 . BBOV_II000230 216 FGGVILR|HW 0.078 . BBOV_II000230 224 WYFFYSR|KT 0.081 . BBOV_II000230 225 YFFYSRK|TP 0.079 . BBOV_II000230 234 GIHHYPK|YS 0.111 . BBOV_II000230 249 GEDSTIK|QD 0.068 . BBOV_II000230 259 AEDENPR|EV 0.101 . BBOV_II000230 287 ENNAAFR|KI 0.106 . BBOV_II000230 288 NNAAFRK|IV 0.157 . BBOV_II000230 296 VGLVGSK|TV 0.061 . BBOV_II000230 314 LLFLASR|ES 0.098 . BBOV_II000230 321 ESMDGMK|KF 0.061 . BBOV_II000230 322 SMDGMKK|FK 0.094 . BBOV_II000230 324 DGMKKFK|NV 0.083 . BBOV_II000230 341 DFLVAPR|TS 0.065 . BBOV_II000230 348 TSLLMPR|HR 0.089 . BBOV_II000230 350 LLMPRHR|VA 0.152 . BBOV_II000230 354 RHRVAGK|MV 0.089 . BBOV_II000230 357 VAGKMVK|SF 0.078 . BBOV_II000230 361 MVKSFIK|YA 0.082 . BBOV_II000230 365 FIKYAEK|DT 0.071 . BBOV_II000230 379 IWDMLSK|CD 0.067 . BBOV_II000230 403 SSGSFDK|DC 0.079 . BBOV_II000230 409 KDCIMAK|LM 0.066 . BBOV_II000230 423 TVASLIK|KT 0.059 . BBOV_II000230 424 VASLIKK|TQ 0.108 . BBOV_II000230 434 LAMFTGK|PY 0.082 . BBOV_II000230 449 SNEDLCK|RY 0.061 . BBOV_II000230 450 NEDLCKR|YF 0.129 . BBOV_II000230 461 DDLEFFK|ML 0.069 . BBOV_II000230 470 FSQIEDK|SS 0.080 . BBOV_II000230 473 IEDKSSK|KL 0.059 . BBOV_II000230 474 EDKSSKK|LL 0.091 . BBOV_II000230 478 SKKLLSR|LA 0.075 . BBOV_II000230 484 RLAASPK|LL 0.070 . BBOV_II000230 502 WDMAPNK|YA 0.071 . BBOV_II000230 515 TLSLPHR|SI 0.185 . BBOV_II000230 528 EGSLWHK|YT 0.104 . BBOV_II000230 532 WHKYTNK|VL 0.065 . ____________________________^_________________

  • Fasta :-

    >BBOV_II000230 ATGGAGGACAGTGCTCAAATCACTCGCATTCTTTGCTACCACTGCAAACGTGCAGTGTCT GACAAATCCTGCTTTGCTGGTGAAGTTATCCACGTTGACGAAATGAAGGCTAAACATTCG GCCAAGGAATATTGGCAGGTAGTCAGTGACCAGGTGGTCAAGGAAAAGAATAGAGCTCAA GCATTGGCAACATTGTTTTCCTCAAAAGTGGTGGAGATTTTCAAGTTTTTAGGCAAGACT TTGGTCGACATTCCTATTAACATGGAGAACAGTAAGGAAATGCAATTTGATTTGTTTTCC ATGCCTCCTTCTATTCGGATGTGTCAGGAGTGTTTGTGCTTTTTTTCGATCGAGCGTTCT TGCCACTGTGAATCTTGTATGGGTCCTGATCATATCAGTCACTATGTGGTCTTGATGCAC GGTGTAGTTGCTGACCCCCTTTGTATGGCTTTTATCGCACAATCGCTTCTTGAAGTTTAT CCACATCTGTTCATCTACTTCCCTCACAAAATTGCTGGTAAGAGTTTGGTTGGATTGGAA CTTGTAGTTAAGACAATAGGTACGGAGCTCTTGGAACTTTTCTCAAAGATTCCGCGTAAG ATCAAACTGAGCATTATTGGCCATTCTTTTGGTGGTGTTATTTTGCGTCATTGGTACTTT TTTTACTCACGTAAAACACCCGGCATTCACCATTACCCGAAGTACTCAAGTGCCAGCGGT AGTACTGGTGAGGATTCTACAATCAAGCAAGATGGTGCAGAGGATGAAAACCCTCGTGAG GTACCCGAGATCATTTGGTGCAATTACATGAGTGTGGCTTCACCTCATGCTGGTATCTAC GAGAATAATGCGGCGTTCCGCAAAATTGTAGGTCTTGTTGGATCCAAGACTGTGGACGAG CTGGATAATGATTCTGTCGATTTGTTATTCCTCGCTAGTCGTGAGTCCATGGATGGAATG AAAAAGTTCAAGAATGTGGTTGTCTATGGTAACCTCTCTGGAGACTTTTTGGTTGCACCG CGTACATCGCTGCTGATGCCACGTCATCGCGTGGCCGGCAAGATGGTCAAGAGCTTTATT AAGTATGCTGAGAAGGATACAGGTGAACCTCATTCAATTTGGGATATGCTTTCTAAATGT GATTTTACGCAGGTCGGTAGTGATGATGAGTCAGACAGTGATGTTGAAAGCTCTGGTTCG TTTGATAAGGATTGTATCATGGCCAAACTGATGGAGAGCTTTTACGCCACAGTGGCGTCC TTGATTAAGAAGACGCAGCACCTGGCCATGTTTACCGGTAAACCGTACGAACCCGTTAAT GGTGAAAGCAATGAGGACTTGTGCAAGAGGTACTTCACATTTGACGACCTCGAGTTCTTC AAGATGCTGTTCTCACAAATTGAGGACAAGTCTTCGAAGAAGCTGCTATCTCGTTTGGCT GCTAGCCCCAAGCTGCTTTACAATGAAGTCCTTCTAACTGCGCTATGGGATATGGCCCCG AACAAGTATGCAGTGTATCTGCCAACACTCAGCCTACCGCACAGGAGCATTCTCACCCCT CTTGAGGGTAGTCTCTGGCACAAGTACACCAACAAGGTGCTACCGCAAATTGCCAGCATC TTTATCACATAA
  • Download Fasta

  • Fasta :-

    MEDSAQITRILCYHCKRAVSDKSCFAGEVIHVDEMKAKHSAKEYWQVVSDQVVKEKNRAQ ALATLFSSKVVEIFKFLGKTLVDIPINMENSKEMQFDLFSMPPSIRMCQECLCFFSIERS CHCESCMGPDHISHYVVLMHGVVADPLCMAFIAQSLLEVYPHLFIYFPHKIAGKSLVGLE LVVKTIGTELLELFSKIPRKIKLSIIGHSFGGVILRHWYFFYSRKTPGIHHYPKYSSASG STGEDSTIKQDGAEDENPREVPEIIWCNYMSVASPHAGIYENNAAFRKIVGLVGSKTVDE LDNDSVDLLFLASRESMDGMKKFKNVVVYGNLSGDFLVAPRTSLLMPRHRVAGKMVKSFI KYAEKDTGEPHSIWDMLSKCDFTQVGSDDESDSDVESSGSFDKDCIMAKLMESFYATVAS LIKKTQHLAMFTGKPYEPVNGESNEDLCKRYFTFDDLEFFKMLFSQIEDKSSKKLLSRLA ASPKLLYNEVLLTALWDMAPNKYAVYLPTLSLPHRSILTPLEGSLWHKYTNKVLPQIASI FIT

    No Results
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IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
BBOV_II000230241 SSASGSTGED0.992unspBBOV_II000230241 SSASGSTGED0.992unspBBOV_II000230241 SSASGSTGED0.992unspBBOV_II000230391 SSDDESDSDV0.996unspBBOV_II000230393 SDESDSDVES0.995unspBBOV_II000230443 SVNGESNEDL0.991unspBBOV_II00023020 SKRAVSDKSC0.992unspBBOV_II00023040 SKAKHSAKEY0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India