BBOV_II003250 | eukaryotic translation initiation factor 3 subunit, putative

_IDPredictionOTHERSPmTPCS_Position
BBOV_II003250OTHER0.9998130.0001560.000031
No Results

  • Fasta :-

    >BBOV_II003250 MVVIRESDLSAEDLADGLMEWMSDHDDSKDEEEMERLALMEHPIELSTIFPNTIIVTGLP LVTQEKYDRLMEILRKKLLKDFEKKGYNIGKDMKVDMPYDEDGNTSGVAFLTFANHMEAV KAQKHINMSKFDASHTLKSALIDDFERIVSDENKCMPALNTFGFTRDDLRTWLFDSDRML DQFVVRYGDHTEINWFDPLEREPILVYNGERERAQGKRVWTDQKVEWSRNGSYLVFYRRP GIALYGGPDFELKVRFEHRNVQKVSFSPDEEYLLTWDGTSDSDKSDNSVCIWHVITGEKL YSFSSREISTMGTDVLRFLWNHNGKYIARLNPSTDGNEILVYQLPEMELIRDAEGKPAPL KYAAERFDWSPTDDILSVLIPGTLDTPARLVLIDIPSRRELSARNVYNVCQSSMHWHPRG ECFCLMTTIYRKTGKKGRKNFYQLDLFRLREKYIPVDTIKIEDATVKNLYWEEGGNKRFA LVVKDEEMSMCSIKFYRVSDEGTARDTVCVATYDLQSQMNKILWSPTGNYFVLGSLSGEG TLLFCMLSNNDKLEILYKDEHFMMNAMKWSPCGRYLATSVCVPMPSQNLVPSTDTFRYSA EAGFCIWTFQGRRLYMARRENFYSFEFRPTPPPMLDKAVIEHIKKNLDEYSRRYDIVDEK AREEYEKQYKAKRQVAEEAFIALAAKLMDYLSKQERFNDFKRGYDEFFDESNWEVSYDIF EEVLEVKEEILD
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_II003250.fa Sequence name : BBOV_II003250 Sequence length : 732 VALUES OF COMPUTED PARAMETERS Coef20 : 3.680 CoefTot : 0.135 ChDiff : -28 ZoneTo : 5 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.565 1.541 0.256 0.618 MesoH : -0.289 0.176 -0.336 0.203 MuHd_075 : 11.824 12.253 4.158 2.995 MuHd_095 : 37.923 19.210 9.468 6.190 MuHd_100 : 39.720 18.786 9.837 6.361 MuHd_105 : 35.898 15.846 8.639 5.347 Hmax_075 : -0.233 13.100 -0.033 4.000 Hmax_095 : 15.100 19.100 3.353 5.760 Hmax_100 : 15.100 19.100 3.353 5.760 Hmax_105 : 15.300 14.600 2.661 5.160 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8940 0.1060 DFMC : 0.9238 0.0762
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 732 BBOV_II003250 MVVIRESDLSAEDLADGLMEWMSDHDDSKDEEEMERLALMEHPIELSTIFPNTIIVTGLPLVTQEKYDRLMEILRKKLLK 80 DFEKKGYNIGKDMKVDMPYDEDGNTSGVAFLTFANHMEAVKAQKHINMSKFDASHTLKSALIDDFERIVSDENKCMPALN 160 TFGFTRDDLRTWLFDSDRMLDQFVVRYGDHTEINWFDPLEREPILVYNGERERAQGKRVWTDQKVEWSRNGSYLVFYRRP 240 GIALYGGPDFELKVRFEHRNVQKVSFSPDEEYLLTWDGTSDSDKSDNSVCIWHVITGEKLYSFSSREISTMGTDVLRFLW 320 NHNGKYIARLNPSTDGNEILVYQLPEMELIRDAEGKPAPLKYAAERFDWSPTDDILSVLIPGTLDTPARLVLIDIPSRRE 400 LSARNVYNVCQSSMHWHPRGECFCLMTTIYRKTGKKGRKNFYQLDLFRLREKYIPVDTIKIEDATVKNLYWEEGGNKRFA 480 LVVKDEEMSMCSIKFYRVSDEGTARDTVCVATYDLQSQMNKILWSPTGNYFVLGSLSGEGTLLFCMLSNNDKLEILYKDE 560 HFMMNAMKWSPCGRYLATSVCVPMPSQNLVPSTDTFRYSAEAGFCIWTFQGRRLYMARRENFYSFEFRPTPPPMLDKAVI 640 EHIKKNLDEYSRRYDIVDEKAREEYEKQYKAKRQVAEEAFIALAAKLMDYLSKQERFNDFKRGYDEFFDESNWEVSYDIF 720 EEVLEVKEEILD 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ............ 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_II003250 5 --MVVIR|ES 0.097 . BBOV_II003250 29 SDHDDSK|DE 0.084 . BBOV_II003250 36 DEEEMER|LA 0.077 . BBOV_II003250 66 PLVTQEK|YD 0.062 . BBOV_II003250 69 TQEKYDR|LM 0.082 . BBOV_II003250 75 RLMEILR|KK 0.067 . BBOV_II003250 76 LMEILRK|KL 0.068 . BBOV_II003250 77 MEILRKK|LL 0.100 . BBOV_II003250 80 LRKKLLK|DF 0.105 . BBOV_II003250 84 LLKDFEK|KG 0.067 . BBOV_II003250 85 LKDFEKK|GY 0.131 . BBOV_II003250 91 KGYNIGK|DM 0.074 . BBOV_II003250 94 NIGKDMK|VD 0.060 . BBOV_II003250 121 NHMEAVK|AQ 0.063 . BBOV_II003250 124 EAVKAQK|HI 0.067 . BBOV_II003250 130 KHINMSK|FD 0.062 . BBOV_II003250 138 DASHTLK|SA 0.085 . BBOV_II003250 147 LIDDFER|IV 0.129 . BBOV_II003250 154 IVSDENK|CM 0.066 . BBOV_II003250 166 NTFGFTR|DD 0.079 . BBOV_II003250 170 FTRDDLR|TW 0.066 . BBOV_II003250 178 WLFDSDR|ML 0.099 . BBOV_II003250 186 LDQFVVR|YG 0.111 . BBOV_II003250 201 WFDPLER|EP 0.073 . BBOV_II003250 211 LVYNGER|ER 0.078 . BBOV_II003250 213 YNGERER|AQ 0.093 . BBOV_II003250 217 RERAQGK|RV 0.086 . BBOV_II003250 218 ERAQGKR|VW 0.287 . BBOV_II003250 224 RVWTDQK|VE 0.054 . BBOV_II003250 229 QKVEWSR|NG 0.082 . BBOV_II003250 238 SYLVFYR|RP 0.096 . BBOV_II003250 239 YLVFYRR|PG 0.103 . BBOV_II003250 253 GPDFELK|VR 0.060 . BBOV_II003250 255 DFELKVR|FE 0.082 . BBOV_II003250 259 KVRFEHR|NV 0.168 . BBOV_II003250 263 EHRNVQK|VS 0.062 . BBOV_II003250 284 GTSDSDK|SD 0.093 . BBOV_II003250 299 HVITGEK|LY 0.058 . BBOV_II003250 306 LYSFSSR|EI 0.222 . BBOV_II003250 317 MGTDVLR|FL 0.086 . BBOV_II003250 325 LWNHNGK|YI 0.081 . BBOV_II003250 329 NGKYIAR|LN 0.077 . BBOV_II003250 351 PEMELIR|DA 0.134 . BBOV_II003250 356 IRDAEGK|PA 0.075 . BBOV_II003250 361 GKPAPLK|YA 0.077 . BBOV_II003250 366 LKYAAER|FD 0.100 . BBOV_II003250 389 TLDTPAR|LV 0.133 . BBOV_II003250 398 LIDIPSR|RE 0.065 . BBOV_II003250 399 IDIPSRR|EL 0.150 . BBOV_II003250 404 RRELSAR|NV 0.192 . BBOV_II003250 419 SMHWHPR|GE 0.158 . BBOV_II003250 431 LMTTIYR|KT 0.100 . BBOV_II003250 432 MTTIYRK|TG 0.077 . BBOV_II003250 435 IYRKTGK|KG 0.070 . BBOV_II003250 436 YRKTGKK|GR 0.078 . BBOV_II003250 438 KTGKKGR|KN 0.130 . BBOV_II003250 439 TGKKGRK|NF 0.081 . BBOV_II003250 448 YQLDLFR|LR 0.079 . BBOV_II003250 450 LDLFRLR|EK 0.075 . BBOV_II003250 452 LFRLREK|YI 0.062 . BBOV_II003250 460 IPVDTIK|IE 0.065 . BBOV_II003250 467 IEDATVK|NL 0.070 . BBOV_II003250 477 WEEGGNK|RF 0.055 . BBOV_II003250 478 EEGGNKR|FA 0.204 . BBOV_II003250 484 RFALVVK|DE 0.082 . BBOV_II003250 494 MSMCSIK|FY 0.081 . BBOV_II003250 497 CSIKFYR|VS 0.129 . BBOV_II003250 505 SDEGTAR|DT 0.108 . BBOV_II003250 521 LQSQMNK|IL 0.066 . BBOV_II003250 552 MLSNNDK|LE 0.061 . BBOV_II003250 558 KLEILYK|DE 0.072 . BBOV_II003250 568 FMMNAMK|WS 0.067 . BBOV_II003250 574 KWSPCGR|YL 0.144 . BBOV_II003250 597 PSTDTFR|YS 0.092 . BBOV_II003250 612 IWTFQGR|RL 0.089 . BBOV_II003250 613 WTFQGRR|LY 0.095 . BBOV_II003250 618 RRLYMAR|RE 0.080 . BBOV_II003250 619 RLYMARR|EN 0.130 . BBOV_II003250 628 FYSFEFR|PT 0.098 . BBOV_II003250 637 PPPMLDK|AV 0.081 . BBOV_II003250 644 AVIEHIK|KN 0.058 . BBOV_II003250 645 VIEHIKK|NL 0.085 . BBOV_II003250 652 NLDEYSR|RY 0.072 . BBOV_II003250 653 LDEYSRR|YD 0.141 . BBOV_II003250 660 YDIVDEK|AR 0.067 . BBOV_II003250 662 IVDEKAR|EE 0.081 . BBOV_II003250 667 AREEYEK|QY 0.078 . BBOV_II003250 670 EYEKQYK|AK 0.066 . BBOV_II003250 672 EKQYKAK|RQ 0.086 . BBOV_II003250 673 KQYKAKR|QV 0.286 . BBOV_II003250 686 FIALAAK|LM 0.062 . BBOV_II003250 693 LMDYLSK|QE 0.057 . BBOV_II003250 696 YLSKQER|FN 0.137 . BBOV_II003250 701 ERFNDFK|RG 0.066 . BBOV_II003250 702 RFNDFKR|GY 0.296 . BBOV_II003250 727 EEVLEVK|EE 0.054 . ____________________________^_________________

  • Fasta :-

    >BBOV_II003250 ATGGTTGTGATAAGGGAGTCCGACCTTTCTGCTGAGGATTTGGCCGATGGCCTCATGGAG TGGATGTCGGACCATGATGACAGCAAAGATGAAGAGGAGATGGAAAGATTAGCATTAATG GAACATCCCATTGAATTGAGTACTATATTTCCAAATACTATTATCGTCACTGGTCTTCCT TTAGTTACTCAGGAGAAGTACGATAGGCTTATGGAGATTTTGAGAAAGAAGTTACTCAAG GATTTTGAGAAGAAGGGATATAATATTGGGAAGGATATGAAGGTCGACATGCCTTATGAT GAGGATGGTAACACTAGTGGTGTGGCATTTTTAACATTTGCAAATCACATGGAAGCTGTG AAAGCTCAGAAGCACATTAACATGTCCAAGTTTGATGCATCGCACACGTTGAAATCAGCG CTAATTGACGATTTTGAGAGAATAGTCAGTGATGAGAATAAGTGTATGCCAGCTCTGAAT ACTTTTGGATTTACTAGAGATGACCTTCGTACTTGGTTATTTGACAGTGACCGTATGTTA GATCAATTTGTGGTTAGATACGGCGACCACACCGAAATTAACTGGTTCGATCCGCTTGAA CGTGAACCCATATTAGTTTATAATGGTGAGCGCGAGCGAGCACAGGGTAAGAGGGTATGG ACCGACCAAAAGGTTGAATGGAGTCGTAATGGTTCATATCTTGTCTTTTACAGGCGACCT GGTATTGCTTTATATGGTGGCCCTGATTTTGAGTTAAAGGTGCGTTTTGAACACAGGAAC GTTCAAAAGGTGTCATTTTCACCTGATGAAGAATATTTGCTTACTTGGGATGGTACTAGT GATTCTGACAAATCAGATAATTCCGTTTGCATATGGCATGTTATAACTGGTGAAAAACTA TATAGTTTCTCATCACGTGAAATTTCAACGATGGGTACTGACGTTTTACGTTTCTTATGG AACCATAACGGGAAGTATATCGCAAGGCTCAACCCATCGACGGACGGTAATGAGATTCTC GTATATCAGCTACCTGAGATGGAGCTCATACGAGATGCCGAGGGTAAGCCAGCGCCTCTA AAGTACGCTGCTGAGAGATTTGATTGGTCTCCAACAGATGACATTCTTTCTGTACTTATA CCGGGGACTCTAGACACTCCAGCGCGTCTTGTATTGATTGATATTCCCAGTCGCCGTGAG TTGAGTGCTAGAAACGTTTACAATGTTTGCCAATCATCAATGCATTGGCATCCGAGGGGT GAATGCTTCTGCCTCATGACTACCATATATAGGAAGACGGGTAAGAAGGGACGCAAGAAC TTTTATCAATTAGATCTATTCCGACTGCGTGAAAAGTACATTCCTGTGGACACTATCAAG ATAGAGGATGCCACTGTGAAAAACCTGTACTGGGAAGAGGGTGGAAACAAACGTTTCGCA TTGGTTGTTAAGGACGAGGAGATGAGCATGTGTTCGATTAAATTCTACCGTGTATCTGAT GAAGGCACTGCTAGGGATACTGTATGCGTTGCCACTTATGACCTTCAGTCACAGATGAAT AAGATTCTGTGGTCACCTACCGGTAACTATTTCGTCCTAGGTTCACTGAGCGGGGAAGGA ACACTTTTATTTTGTATGCTCAGTAACAATGACAAGTTGGAAATCTTGTACAAGGACGAG CACTTCATGATGAACGCGATGAAGTGGAGCCCTTGCGGTCGTTATTTGGCAACAAGCGTT TGTGTTCCCATGCCATCACAGAACCTTGTGCCGAGCACTGATACCTTCAGATACTCAGCT GAAGCTGGTTTCTGTATATGGACTTTCCAAGGAAGGAGATTATACATGGCACGCCGTGAA AACTTTTACAGCTTTGAGTTCAGGCCTACGCCTCCACCTATGTTGGATAAGGCCGTGATT GAGCACATTAAGAAAAATCTAGATGAATACAGTCGTAGATACGACATTGTTGATGAGAAG GCTCGTGAAGAATACGAAAAGCAGTATAAGGCCAAACGCCAAGTTGCCGAAGAAGCATTC ATTGCACTTGCGGCTAAACTCATGGACTACCTATCTAAGCAGGAACGCTTCAACGATTTC AAACGTGGTTACGACGAATTTTTCGACGAGAGTAATTGGGAGGTGTCCTATGACATATTC GAGGAGGTTCTTGAGGTCAAGGAGGAGATCCTTGATTAA
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  • Fasta :-

    MVVIRESDLSAEDLADGLMEWMSDHDDSKDEEEMERLALMEHPIELSTIFPNTIIVTGLP LVTQEKYDRLMEILRKKLLKDFEKKGYNIGKDMKVDMPYDEDGNTSGVAFLTFANHMEAV KAQKHINMSKFDASHTLKSALIDDFERIVSDENKCMPALNTFGFTRDDLRTWLFDSDRML DQFVVRYGDHTEINWFDPLEREPILVYNGERERAQGKRVWTDQKVEWSRNGSYLVFYRRP GIALYGGPDFELKVRFEHRNVQKVSFSPDEEYLLTWDGTSDSDKSDNSVCIWHVITGEKL YSFSSREISTMGTDVLRFLWNHNGKYIARLNPSTDGNEILVYQLPEMELIRDAEGKPAPL KYAAERFDWSPTDDILSVLIPGTLDTPARLVLIDIPSRRELSARNVYNVCQSSMHWHPRG ECFCLMTTIYRKTGKKGRKNFYQLDLFRLREKYIPVDTIKIEDATVKNLYWEEGGNKRFA LVVKDEEMSMCSIKFYRVSDEGTARDTVCVATYDLQSQMNKILWSPTGNYFVLGSLSGEG TLLFCMLSNNDKLEILYKDEHFMMNAMKWSPCGRYLATSVCVPMPSQNLVPSTDTFRYSA EAGFCIWTFQGRRLYMARRENFYSFEFRPTPPPMLDKAVIEHIKKNLDEYSRRYDIVDEK AREEYEKQYKAKRQVAEEAFIALAAKLMDYLSKQERFNDFKRGYDEFFDESNWEVSYDIF EEVLEVKEEILD

  • title: polypeptide substrate binding site
  • coordinates: V56,L59,K66,R69,L70,E72,I73,L74,K76,K77,K84,H125,I126,N127,M128,K130,F131,T136,L137
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
BBOV_II003250150 SERIVSDENK0.99unspBBOV_II003250150 SERIVSDENK0.99unspBBOV_II003250150 SERIVSDENK0.99unspBBOV_II003250267 SKVSFSPDEE0.994unspBBOV_II003250280 SWDGTSDSDK0.992unspBBOV_II003250309 SSREISTMGT0.995unspBBOV_II003250370 SRFDWSPTDD0.993unspBBOV_II003250599 STFRYSAEAG0.995unspBBOV_II00325010 SESDLSAEDL0.997unspBBOV_II00325028 SDHDDSKDEE0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India