BBOV_II004550 | conserved hypothetical protein

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_IDPredictionOTHERSPmTPCS_Position
BBOV_II004550OTHER0.9997700.0000950.000135
No Results

  • Fasta :-

    >BBOV_II004550 MEQKSANNDTIARINELSKIRKDIEVEMEALLNYLNSEECKHVGMKGPLVDEEQYPRSDI DICAVRNARHRINCLHTDYKELEDKLAQALHELHNKKDVV
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_II004550.fa Sequence name : BBOV_II004550 Sequence length : 100 VALUES OF COMPUTED PARAMETERS Coef20 : 3.856 CoefTot : 0.000 ChDiff : -5 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : -1.406 -0.018 -0.618 0.128 MesoH : -2.637 -0.575 -0.870 -0.127 MuHd_075 : 25.105 12.895 6.287 5.607 MuHd_095 : 16.780 8.526 4.700 2.799 MuHd_100 : 20.620 9.149 4.473 2.885 MuHd_105 : 25.097 13.009 5.004 3.944 Hmax_075 : 5.950 3.733 -0.952 1.925 Hmax_095 : -3.587 -1.050 -3.310 0.717 Hmax_100 : 1.900 4.300 -1.439 2.040 Hmax_105 : -0.600 6.500 -2.402 2.080 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8398 0.1602 DFMC : 0.8735 0.1265
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 100 BBOV_II004550 MEQKSANNDTIARINELSKIRKDIEVEMEALLNYLNSEECKHVGMKGPLVDEEQYPRSDIDICAVRNARHRINCLHTDYK 80 ELEDKLAQALHELHNKKDVV 160 ................................................................................ 80 .................... 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_II004550 4 ---MEQK|SA 0.081 . BBOV_II004550 13 NNDTIAR|IN 0.079 . BBOV_II004550 19 RINELSK|IR 0.073 . BBOV_II004550 21 NELSKIR|KD 0.087 . BBOV_II004550 22 ELSKIRK|DI 0.168 . BBOV_II004550 41 LNSEECK|HV 0.134 . BBOV_II004550 46 CKHVGMK|GP 0.069 . BBOV_II004550 57 DEEQYPR|SD 0.099 . BBOV_II004550 66 IDICAVR|NA 0.090 . BBOV_II004550 69 CAVRNAR|HR 0.230 . BBOV_II004550 71 VRNARHR|IN 0.099 . BBOV_II004550 80 CLHTDYK|EL 0.083 . BBOV_II004550 85 YKELEDK|LA 0.061 . BBOV_II004550 96 LHELHNK|KD 0.060 . BBOV_II004550 97 HELHNKK|DV 0.160 . ____________________________^_________________

  • Fasta :-

    >BBOV_II004550 ATGGAGCAAAAGTCGGCAAATAACGACACAATCGCACGAATCAATGAACTTAGTAAAATA AGGAAGGACATTGAAGTTGAAATGGAGGCACTTCTAAATTATCTAAACAGTGAAGAATGC AAACACGTTGGCATGAAAGGACCACTGGTTGATGAAGAACAATACCCGAGAAGCGACATT GACATCTGTGCGGTAAGAAACGCTCGACATCGGATCAATTGCCTACATACGGACTACAAA GAACTAGAAGATAAGCTAGCACAGGCGCTACATGAACTGCACAACAAGAAAGATGTTGTA TAG
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  • Fasta :-

    MEQKSANNDTIARINELSKIRKDIEVEMEALLNYLNSEECKHVGMKGPLVDEEQYPRSDI DICAVRNARHRINCLHTDYKELEDKLAQALHELHNKKDVV

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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India