BBOV_II005930 | rhomboid 4

  • Computed_GO_Component_IDs:  GO:0016021      

  • Computed_GO_Components:  integral component of membrane      

  • Computed_GO_Function_IDs:  GO:0004252      

  • Computed_GO_Functions:  serine-type endopeptidase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
BBOV_II005930OTHER0.9999960.0000000.000004
No Results

  • Fasta :-

    >BBOV_II005930 MGDNDSNDKKNANRHSLNAIKGGFVKDMVNRGFRKKINDSDKNDDSKEDKGGEKPSNVSK DSSSMKAGNVAALRDQFKRAAEKDESKDQNSQAGQSSLTSKAPLGDPRTDQRARAKFLAE KYEKILAARNMVEESASRALQRPATSTPAKIPASVSGVSKEPKDTSEQPRPSKAEPRPST TPSTSLGPQEPKDTSEQPRPSKAEPRPSTTPSTSLGPQEPKDTSEQPRPSKAEPRPSTTP STSLGPQEPKDTSEQPRSSKAESKLSTTLSKLRFSRESRSVIKGTGSFGGSSQVSSNAGR RVHTLADTASTDDASIRQAMSQSFSSPGVSQPEQPERASRGRNMFGMRRRPCWIRIQVKE KIFPGKMILAISTTILIIVVFMFELFINRATFNGRCIGEVDYTHRHEGKAILSYLGYVGC ENNLKTTAAERGFLGAGASDKGYPVDYVHKGNLATSLAPPDGPNYRIGTIVGALSANTIR IYGESSRLLTSIFLHGGRWHLLCNCLMNMLLLYVIEPDWGFKRTLALYIFGGYSANLVHA SMSPCIPCWGASGSLFSLYGAFIPYTVEHWDNLRSPMALIVIAITISLLEIILPGVGVSN HAHLGGFAFGLCFGFATLKSVSAFDRGALWSRIALRFSSRLSPEAVQKHQAKVVKSAQSE EILRIKYEQGAKDSANRLRFVKRMFGIYPYGPYRMRLRDVLTRVVFLCALIAMFVFFYLA TFYESVYKNIDRNATILFSRACHCGYFKSSGDELLLNQIGNLAGKFYCFDSESARDKFCA VSG
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_II005930.fa Sequence name : BBOV_II005930 Sequence length : 783 VALUES OF COMPUTED PARAMETERS Coef20 : 3.244 CoefTot : -0.250 ChDiff : 32 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.653 2.835 0.533 0.932 MesoH : 0.866 1.054 0.018 0.508 MuHd_075 : 38.460 15.920 9.583 6.908 MuHd_095 : 20.639 13.569 5.880 4.400 MuHd_100 : 21.928 12.040 6.533 4.363 MuHd_105 : 17.188 7.579 5.474 3.311 Hmax_075 : 0.350 -1.313 -2.650 0.805 Hmax_095 : -11.725 -4.025 -5.442 -0.455 Hmax_100 : -16.200 -8.400 -6.742 -1.620 Hmax_105 : -11.433 -8.867 -5.594 -1.797 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9699 0.0301 DFMC : 0.9689 0.0311
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 783 BBOV_II005930 MGDNDSNDKKNANRHSLNAIKGGFVKDMVNRGFRKKINDSDKNDDSKEDKGGEKPSNVSKDSSSMKAGNVAALRDQFKRA 80 AEKDESKDQNSQAGQSSLTSKAPLGDPRTDQRARAKFLAEKYEKILAARNMVEESASRALQRPATSTPAKIPASVSGVSK 160 EPKDTSEQPRPSKAEPRPSTTPSTSLGPQEPKDTSEQPRPSKAEPRPSTTPSTSLGPQEPKDTSEQPRPSKAEPRPSTTP 240 STSLGPQEPKDTSEQPRSSKAESKLSTTLSKLRFSRESRSVIKGTGSFGGSSQVSSNAGRRVHTLADTASTDDASIRQAM 320 SQSFSSPGVSQPEQPERASRGRNMFGMRRRPCWIRIQVKEKIFPGKMILAISTTILIIVVFMFELFINRATFNGRCIGEV 400 DYTHRHEGKAILSYLGYVGCENNLKTTAAERGFLGAGASDKGYPVDYVHKGNLATSLAPPDGPNYRIGTIVGALSANTIR 480 IYGESSRLLTSIFLHGGRWHLLCNCLMNMLLLYVIEPDWGFKRTLALYIFGGYSANLVHASMSPCIPCWGASGSLFSLYG 560 AFIPYTVEHWDNLRSPMALIVIAITISLLEIILPGVGVSNHAHLGGFAFGLCFGFATLKSVSAFDRGALWSRIALRFSSR 640 LSPEAVQKHQAKVVKSAQSEEILRIKYEQGAKDSANRLRFVKRMFGIYPYGPYRMRLRDVLTRVVFLCALIAMFVFFYLA 720 TFYESVYKNIDRNATILFSRACHCGYFKSSGDELLLNQIGNLAGKFYCFDSESARDKFCAVSG 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ......................................P......................................... 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ............................................................... 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ BBOV_II005930 9 DNDSNDK|KN 0.051 . BBOV_II005930 10 NDSNDKK|NA 0.110 . BBOV_II005930 14 DKKNANR|HS 0.101 . BBOV_II005930 21 HSLNAIK|GG 0.063 . BBOV_II005930 26 IKGGFVK|DM 0.067 . BBOV_II005930 31 VKDMVNR|GF 0.121 . BBOV_II005930 34 MVNRGFR|KK 0.153 . BBOV_II005930 35 VNRGFRK|KI 0.104 . BBOV_II005930 36 NRGFRKK|IN 0.108 . BBOV_II005930 42 KINDSDK|ND 0.081 . BBOV_II005930 47 DKNDDSK|ED 0.069 . BBOV_II005930 50 DDSKEDK|GG 0.071 . BBOV_II005930 54 EDKGGEK|PS 0.062 . BBOV_II005930 60 KPSNVSK|DS 0.100 . BBOV_II005930 66 KDSSSMK|AG 0.071 . BBOV_II005930 74 GNVAALR|DQ 0.091 . BBOV_II005930 78 ALRDQFK|RA 0.074 . BBOV_II005930 79 LRDQFKR|AA 0.400 . BBOV_II005930 83 FKRAAEK|DE 0.079 . BBOV_II005930 87 AEKDESK|DQ 0.069 . BBOV_II005930 101 QSSLTSK|AP 0.069 . BBOV_II005930 108 APLGDPR|TD 0.082 . BBOV_II005930 112 DPRTDQR|AR 0.088 . BBOV_II005930 114 RTDQRAR|AK 0.107 . BBOV_II005930 116 DQRARAK|FL 0.079 . BBOV_II005930 121 AKFLAEK|YE 0.055 . BBOV_II005930 124 LAEKYEK|IL 0.062 . BBOV_II005930 129 EKILAAR|NM 0.075 . BBOV_II005930 138 VEESASR|AL 0.069 . BBOV_II005930 142 ASRALQR|PA 0.112 . BBOV_II005930 150 ATSTPAK|IP 0.070 . BBOV_II005930 160 SVSGVSK|EP 0.066 . BBOV_II005930 163 GVSKEPK|DT 0.123 . BBOV_II005930 170 DTSEQPR|PS 0.127 . BBOV_II005930 173 EQPRPSK|AE 0.085 . BBOV_II005930 177 PSKAEPR|PS 0.091 . BBOV_II005930 192 LGPQEPK|DT 0.081 . BBOV_II005930 199 DTSEQPR|PS 0.127 . BBOV_II005930 202 EQPRPSK|AE 0.085 . BBOV_II005930 206 PSKAEPR|PS 0.091 . BBOV_II005930 221 LGPQEPK|DT 0.081 . BBOV_II005930 228 DTSEQPR|PS 0.127 . BBOV_II005930 231 EQPRPSK|AE 0.085 . BBOV_II005930 235 PSKAEPR|PS 0.091 . BBOV_II005930 250 LGPQEPK|DT 0.087 . BBOV_II005930 257 DTSEQPR|SS 0.198 . BBOV_II005930 260 EQPRSSK|AE 0.121 . BBOV_II005930 264 SSKAESK|LS 0.062 . BBOV_II005930 271 LSTTLSK|LR 0.059 . BBOV_II005930 273 TTLSKLR|FS 0.096 . BBOV_II005930 276 SKLRFSR|ES 0.273 . BBOV_II005930 279 RFSRESR|SV 0.799 *ProP* BBOV_II005930 283 ESRSVIK|GT 0.087 . BBOV_II005930 300 VSSNAGR|RV 0.161 . BBOV_II005930 301 SSNAGRR|VH 0.117 . BBOV_II005930 317 TDDASIR|QA 0.120 . BBOV_II005930 337 QPEQPER|AS 0.093 . BBOV_II005930 340 QPERASR|GR 0.227 . BBOV_II005930 342 ERASRGR|NM 0.113 . BBOV_II005930 348 RNMFGMR|RR 0.076 . BBOV_II005930 349 NMFGMRR|RP 0.103 . BBOV_II005930 350 MFGMRRR|PC 0.135 . BBOV_II005930 355 RRPCWIR|IQ 0.080 . BBOV_II005930 359 WIRIQVK|EK 0.065 . BBOV_II005930 361 RIQVKEK|IF 0.068 . BBOV_II005930 366 EKIFPGK|MI 0.087 . BBOV_II005930 389 FELFINR|AT 0.081 . BBOV_II005930 395 RATFNGR|CI 0.132 . BBOV_II005930 405 EVDYTHR|HE 0.102 . BBOV_II005930 409 THRHEGK|AI 0.086 . BBOV_II005930 425 GCENNLK|TT 0.063 . BBOV_II005930 431 KTTAAER|GF 0.084 . BBOV_II005930 441 GAGASDK|GY 0.066 . BBOV_II005930 450 PVDYVHK|GN 0.058 . BBOV_II005930 466 PDGPNYR|IG 0.091 . BBOV_II005930 480 LSANTIR|IY 0.105 . BBOV_II005930 487 IYGESSR|LL 0.087 . BBOV_II005930 498 IFLHGGR|WH 0.064 . BBOV_II005930 522 EPDWGFK|RT 0.054 . BBOV_II005930 523 PDWGFKR|TL 0.149 . BBOV_II005930 574 EHWDNLR|SP 0.095 . BBOV_II005930 619 FGFATLK|SV 0.093 . BBOV_II005930 626 SVSAFDR|GA 0.159 . BBOV_II005930 632 RGALWSR|IA 0.075 . BBOV_II005930 636 WSRIALR|FS 0.104 . BBOV_II005930 640 ALRFSSR|LS 0.093 . BBOV_II005930 648 SPEAVQK|HQ 0.078 . BBOV_II005930 652 VQKHQAK|VV 0.091 . BBOV_II005930 655 HQAKVVK|SA 0.137 . BBOV_II005930 664 QSEEILR|IK 0.075 . BBOV_II005930 666 EEILRIK|YE 0.064 . BBOV_II005930 672 KYEQGAK|DS 0.063 . BBOV_II005930 677 AKDSANR|LR 0.078 . BBOV_II005930 679 DSANRLR|FV 0.182 . BBOV_II005930 682 NRLRFVK|RM 0.121 . BBOV_II005930 683 RLRFVKR|MF 0.362 . BBOV_II005930 694 YPYGPYR|MR 0.075 . BBOV_II005930 696 YGPYRMR|LR 0.073 . BBOV_II005930 698 PYRMRLR|DV 0.121 . BBOV_II005930 703 LRDVLTR|VV 0.095 . BBOV_II005930 728 FYESVYK|NI 0.065 . BBOV_II005930 732 VYKNIDR|NA 0.093 . BBOV_II005930 740 ATILFSR|AC 0.093 . BBOV_II005930 748 CHCGYFK|SS 0.090 . BBOV_II005930 765 IGNLAGK|FY 0.064 . BBOV_II005930 775 FDSESAR|DK 0.158 . BBOV_II005930 777 SESARDK|FC 0.081 . ____________________________^_________________

  • Fasta :-

    >BBOV_II005930 ATGGGAGATAATGATTCGAATGATAAGAAGAATGCTAATAGGCATTCACTTAACGCTATT AAAGGCGGTTTTGTGAAGGATATGGTGAATCGGGGATTCAGGAAGAAGATTAATGATAGT GATAAGAATGATGATAGCAAAGAGGATAAAGGTGGAGAAAAACCGAGTAACGTGTCGAAG GATTCGTCGTCTATGAAAGCTGGTAATGTGGCTGCTTTGAGAGATCAATTCAAGCGTGCT GCTGAGAAAGATGAATCTAAAGACCAAAATTCGCAAGCTGGGCAGAGCAGCTTAACCTCG AAGGCTCCTCTTGGTGATCCGAGAACTGATCAACGAGCACGAGCCAAATTCCTCGCAGAG AAATATGAAAAAATATTGGCTGCCCGTAACATGGTGGAAGAGTCCGCCAGTCGTGCATTG CAGCGCCCAGCGACGAGTACACCAGCAAAGATACCGGCCTCTGTATCTGGTGTTTCGAAA GAACCTAAAGACACCAGCGAACAACCTAGGCCATCGAAAGCTGAACCTCGACCTAGTACC ACACCATCTACCTCCTTAGGTCCACAAGAACCTAAAGACACCAGCGAACAACCTAGGCCA TCGAAAGCTGAACCTCGACCTAGTACCACACCATCTACCTCCTTAGGTCCACAAGAACCT AAAGACACCAGCGAACAACCTAGGCCATCGAAAGCTGAACCTCGACCTAGTACCACACCA TCTACCTCCTTAGGTCCACAAGAACCTAAAGACACCAGCGAACAACCCAGATCATCGAAA GCTGAGTCCAAATTGAGTACTACACTATCAAAATTGAGATTCTCTCGTGAATCCCGATCA GTGATTAAAGGTACGGGCTCTTTTGGCGGTTCATCTCAGGTAAGCTCCAATGCTGGTCGT CGTGTTCATACTTTGGCGGACACTGCTTCCACTGATGACGCTAGTATTAGACAGGCTATG TCCCAATCCTTTTCCAGCCCTGGTGTTAGTCAGCCAGAGCAACCCGAGCGTGCCTCGCGT GGCCGTAACATGTTTGGTATGCGTCGCCGTCCATGTTGGATTCGTATTCAAGTGAAGGAG AAGATATTTCCCGGTAAGATGATATTGGCAATCAGTACTACAATACTGATAATTGTTGTT TTTATGTTTGAGTTATTCATCAACAGAGCTACCTTTAACGGTCGCTGTATAGGTGAGGTG GATTATACTCACAGACATGAGGGTAAAGCTATCTTATCATACCTGGGTTATGTTGGTTGT GAGAATAACCTCAAAACAACTGCTGCCGAACGTGGATTCCTTGGTGCTGGAGCGAGTGAT AAAGGCTATCCAGTTGATTATGTGCATAAAGGGAATTTGGCAACTTCACTTGCTCCTCCT GACGGACCTAATTACCGTATAGGCACTATTGTTGGCGCACTATCGGCTAATACAATTCGT ATCTATGGAGAGTCCTCTAGGTTGCTTACTTCCATATTCTTACATGGAGGAAGGTGGCAT CTTCTTTGTAATTGTTTGATGAACATGTTGCTTCTCTATGTGATTGAGCCGGACTGGGGA TTCAAACGCACATTAGCGCTGTATATATTCGGTGGTTACAGTGCCAATCTGGTTCACGCC AGTATGTCTCCTTGTATCCCATGCTGGGGAGCTTCTGGGTCACTGTTTAGTTTGTATGGA GCATTCATTCCTTACACGGTAGAGCATTGGGACAACCTGAGATCACCAATGGCTCTAATT GTCATAGCCATAACAATCTCTCTCCTGGAAATAATATTACCGGGAGTAGGCGTTAGTAAT CATGCCCACTTGGGTGGTTTTGCGTTTGGTTTGTGTTTCGGTTTCGCCACATTGAAATCA GTATCTGCGTTTGACCGTGGTGCCTTGTGGTCACGTATAGCACTTCGGTTTTCTAGTAGG CTTTCACCAGAGGCCGTGCAGAAACACCAAGCCAAGGTTGTGAAGAGTGCTCAGTCAGAG GAGATTCTGCGTATTAAATATGAGCAGGGTGCTAAGGATAGTGCTAATCGTCTTCGCTTT GTCAAGCGTATGTTCGGTATATATCCCTATGGCCCATACCGTATGAGGCTGCGTGATGTA CTTACTCGCGTTGTATTCCTTTGTGCCCTAATCGCGATGTTTGTATTCTTCTATTTGGCG ACTTTCTATGAAAGCGTCTATAAGAATATAGATAGGAATGCAACGATACTTTTCTCTCGT GCCTGCCATTGCGGCTATTTCAAATCATCTGGTGATGAGTTGTTATTAAATCAAATAGGC AACCTAGCTGGCAAATTCTATTGTTTCGATTCAGAAAGCGCCAGGGATAAGTTCTGTGCT GTTTCTGGTTGAACCGGTTAACATTGTATCACGTACATGCTGAACTTTTCATCATT
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  • Fasta :-

    MGDNDSNDKKNANRHSLNAIKGGFVKDMVNRGFRKKINDSDKNDDSKEDKGGEKPSNVSK DSSSMKAGNVAALRDQFKRAAEKDESKDQNSQAGQSSLTSKAPLGDPRTDQRARAKFLAE KYEKILAARNMVEESASRALQRPATSTPAKIPASVSGVSKEPKDTSEQPRPSKAEPRPST TPSTSLGPQEPKDTSEQPRPSKAEPRPSTTPSTSLGPQEPKDTSEQPRPSKAEPRPSTTP STSLGPQEPKDTSEQPRSSKAESKLSTTLSKLRFSRESRSVIKGTGSFGGSSQVSSNAGR RVHTLADTASTDDASIRQAMSQSFSSPGVSQPEQPERASRGRNMFGMRRRPCWIRIQVKE KIFPGKMILAISTTILIIVVFMFELFINRATFNGRCIGEVDYTHRHEGKAILSYLGYVGC ENNLKTTAAERGFLGAGASDKGYPVDYVHKGNLATSLAPPDGPNYRIGTIVGALSANTIR IYGESSRLLTSIFLHGGRWHLLCNCLMNMLLLYVIEPDWGFKRTLALYIFGGYSANLVHA SMSPCIPCWGASGSLFSLYGAFIPYTVEHWDNLRSPMALIVIAITISLLEIILPGVGVSN HAHLGGFAFGLCFGFATLKSVSAFDRGALWSRIALRFSSRLSPEAVQKHQAKVVKSAQSE EILRIKYEQGAKDSANRLRFVKRMFGIYPYGPYRMRLRDVLTRVVFLCALIAMFVFFYLA TFYESVYKNIDRNATILFSRACHCGYFKSSGDELLLNQIGNLAGKFYCFDSESARDKFCA VSG

    No Results
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IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
BBOV_II00593064 SKDSSSMKAG0.993unspBBOV_II00593064 SKDSSSMKAG0.993unspBBOV_II00593064 SKDSSSMKAG0.993unspBBOV_II005930159 SVSGVSKEPK0.992unspBBOV_II005930172 SQPRPSKAEP0.997unspBBOV_II005930179 SEPRPSTTPS0.991unspBBOV_II005930201 SQPRPSKAEP0.997unspBBOV_II005930208 SEPRPSTTPS0.991unspBBOV_II005930230 SQPRPSKAEP0.997unspBBOV_II005930237 SEPRPSTTPS0.991unspBBOV_II005930258 SEQPRSSKAE0.992unspBBOV_II005930259 SQPRSSKAES0.998unspBBOV_II005930275 SKLRFSRESR0.996unspBBOV_II005930278 SFSRESRSVI0.993unspBBOV_II005930330 SSPGVSQPEQ0.992unspBBOV_II005930642 SSSRLSPEAV0.997unspBBOV_II00593040 SKINDSDKND0.996unspBBOV_II00593046 SKNDDSKEDK0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India