BBOV_II005940 | rhomboid 4

  • Computed_GO_Component_IDs:  GO:0016021      

  • Computed_GO_Components:  integral component of membrane      

  • Computed_GO_Function_IDs:  GO:0004252      

  • Computed_GO_Functions:  serine-type endopeptidase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
BBOV_II005940OTHER0.9999870.0000010.000012
No Results

  • Fasta :-

    >BBOV_II005940 MGDNDSNDKKNANRHSLNAIKGGFVKDMVNRGFRKKINDSDKNDDSNVDGPSNDITDKGH HRNAGIEDSENILSQAQSDTKDKPSVAKSLAEKYERGLFNRNKVDESLISKAESQPSTTP STSMGSSEIKGARAFGGSSQVSSNAGRRVHTLADTASTDDASIRQAMSQSFSSPGVSQPE QPERASRGRNMFGMRRRPCWIRIQVKEKIFPGKMVLAISTTILMIVVFLFELLLNKTTFN GRCIGQVDYSNRLAGKSTLSFIGYVGCENNLKTTAAERGFLGAAASDAGYPDDIVTDGRL AHAPAVVDGPNVRIASIIGAVSANEVRLYNEKFRILSAIFLHAGFTHLFTNCLMNMLLLY VIEPDWGFKRTSLLYLVAGIGGNLVHTSMSPCIPCWGASGSLFGLYGAFIPYTIEHWDNL RSPLLLLLISVAFVSIEFFSFVRGVSKHAHLGGFAFGLCFGFATLKSVSAFDRGALWSRI ALRFSSRLSPEAVQKHQAKVVKSAQSEEILRIKYEQGAKDSANRLRFVKRMFGIYPYGPY RMRLRDVLTRVVFLCALVSQPVFTYTPEQIAMFVFFYYSTFNERFYTWLNRAGIRFVSPL CHCGYLRDLTGPSILSKQIGSLAGKYYCFQSEALWNVFCEK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_II005940.fa Sequence name : BBOV_II005940 Sequence length : 641 VALUES OF COMPUTED PARAMETERS Coef20 : 3.244 CoefTot : -0.250 ChDiff : 21 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.606 2.735 0.474 0.872 MesoH : 0.857 0.993 0.004 0.481 MuHd_075 : 38.460 15.920 9.583 6.908 MuHd_095 : 20.639 13.569 5.880 4.400 MuHd_100 : 21.928 12.040 6.533 4.363 MuHd_105 : 17.188 7.579 5.474 3.311 Hmax_075 : 0.350 -1.313 -2.650 0.805 Hmax_095 : -11.725 -4.025 -5.442 -0.455 Hmax_100 : -16.200 -8.400 -6.742 -1.620 Hmax_105 : -11.433 -8.867 -5.594 -1.797 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9799 0.0201 DFMC : 0.9709 0.0291
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 641 BBOV_II005940 MGDNDSNDKKNANRHSLNAIKGGFVKDMVNRGFRKKINDSDKNDDSNVDGPSNDITDKGHHRNAGIEDSENILSQAQSDT 80 KDKPSVAKSLAEKYERGLFNRNKVDESLISKAESQPSTTPSTSMGSSEIKGARAFGGSSQVSSNAGRRVHTLADTASTDD 160 ASIRQAMSQSFSSPGVSQPEQPERASRGRNMFGMRRRPCWIRIQVKEKIFPGKMVLAISTTILMIVVFLFELLLNKTTFN 240 GRCIGQVDYSNRLAGKSTLSFIGYVGCENNLKTTAAERGFLGAAASDAGYPDDIVTDGRLAHAPAVVDGPNVRIASIIGA 320 VSANEVRLYNEKFRILSAIFLHAGFTHLFTNCLMNMLLLYVIEPDWGFKRTSLLYLVAGIGGNLVHTSMSPCIPCWGASG 400 SLFGLYGAFIPYTIEHWDNLRSPLLLLLISVAFVSIEFFSFVRGVSKHAHLGGFAFGLCFGFATLKSVSAFDRGALWSRI 480 ALRFSSRLSPEAVQKHQAKVVKSAQSEEILRIKYEQGAKDSANRLRFVKRMFGIYPYGPYRMRLRDVLTRVVFLCALVSQ 560 PVFTYTPEQIAMFVFFYYSTFNERFYTWLNRAGIRFVSPLCHCGYLRDLTGPSILSKQIGSLAGKYYCFQSEALWNVFCE 640 K 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 . 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_II005940 9 DNDSNDK|KN 0.051 . BBOV_II005940 10 NDSNDKK|NA 0.110 . BBOV_II005940 14 DKKNANR|HS 0.101 . BBOV_II005940 21 HSLNAIK|GG 0.063 . BBOV_II005940 26 IKGGFVK|DM 0.067 . BBOV_II005940 31 VKDMVNR|GF 0.121 . BBOV_II005940 34 MVNRGFR|KK 0.153 . BBOV_II005940 35 VNRGFRK|KI 0.104 . BBOV_II005940 36 NRGFRKK|IN 0.108 . BBOV_II005940 42 KINDSDK|ND 0.074 . BBOV_II005940 58 SNDITDK|GH 0.065 . BBOV_II005940 62 TDKGHHR|NA 0.140 . BBOV_II005940 81 QAQSDTK|DK 0.067 . BBOV_II005940 83 QSDTKDK|PS 0.062 . BBOV_II005940 88 DKPSVAK|SL 0.087 . BBOV_II005940 93 AKSLAEK|YE 0.067 . BBOV_II005940 96 LAEKYER|GL 0.083 . BBOV_II005940 101 ERGLFNR|NK 0.090 . BBOV_II005940 103 GLFNRNK|VD 0.063 . BBOV_II005940 111 DESLISK|AE 0.063 . BBOV_II005940 130 MGSSEIK|GA 0.096 . BBOV_II005940 133 SEIKGAR|AF 0.125 . BBOV_II005940 147 VSSNAGR|RV 0.161 . BBOV_II005940 148 SSNAGRR|VH 0.117 . BBOV_II005940 164 TDDASIR|QA 0.120 . BBOV_II005940 184 QPEQPER|AS 0.093 . BBOV_II005940 187 QPERASR|GR 0.227 . BBOV_II005940 189 ERASRGR|NM 0.113 . BBOV_II005940 195 RNMFGMR|RR 0.076 . BBOV_II005940 196 NMFGMRR|RP 0.103 . BBOV_II005940 197 MFGMRRR|PC 0.135 . BBOV_II005940 202 RRPCWIR|IQ 0.080 . BBOV_II005940 206 WIRIQVK|EK 0.065 . BBOV_II005940 208 RIQVKEK|IF 0.070 . BBOV_II005940 213 EKIFPGK|MV 0.102 . BBOV_II005940 236 FELLLNK|TT 0.058 . BBOV_II005940 242 KTTFNGR|CI 0.114 . BBOV_II005940 252 QVDYSNR|LA 0.135 . BBOV_II005940 256 SNRLAGK|ST 0.086 . BBOV_II005940 272 GCENNLK|TT 0.063 . BBOV_II005940 278 KTTAAER|GF 0.077 . BBOV_II005940 299 DIVTDGR|LA 0.080 . BBOV_II005940 313 VDGPNVR|IA 0.116 . BBOV_II005940 327 VSANEVR|LY 0.087 . BBOV_II005940 332 VRLYNEK|FR 0.057 . BBOV_II005940 334 LYNEKFR|IL 0.158 . BBOV_II005940 369 EPDWGFK|RT 0.056 . BBOV_II005940 370 PDWGFKR|TS 0.126 . BBOV_II005940 421 EHWDNLR|SP 0.077 . BBOV_II005940 443 EFFSFVR|GV 0.124 . BBOV_II005940 447 FVRGVSK|HA 0.083 . BBOV_II005940 466 FGFATLK|SV 0.093 . BBOV_II005940 473 SVSAFDR|GA 0.159 . BBOV_II005940 479 RGALWSR|IA 0.075 . BBOV_II005940 483 WSRIALR|FS 0.104 . BBOV_II005940 487 ALRFSSR|LS 0.093 . BBOV_II005940 495 SPEAVQK|HQ 0.078 . BBOV_II005940 499 VQKHQAK|VV 0.091 . BBOV_II005940 502 HQAKVVK|SA 0.137 . BBOV_II005940 511 QSEEILR|IK 0.075 . BBOV_II005940 513 EEILRIK|YE 0.064 . BBOV_II005940 519 KYEQGAK|DS 0.063 . BBOV_II005940 524 AKDSANR|LR 0.078 . BBOV_II005940 526 DSANRLR|FV 0.182 . BBOV_II005940 529 NRLRFVK|RM 0.121 . BBOV_II005940 530 RLRFVKR|MF 0.362 . BBOV_II005940 541 YPYGPYR|MR 0.075 . BBOV_II005940 543 YGPYRMR|LR 0.073 . BBOV_II005940 545 PYRMRLR|DV 0.121 . BBOV_II005940 550 LRDVLTR|VV 0.095 . BBOV_II005940 584 YSTFNER|FY 0.086 . BBOV_II005940 591 FYTWLNR|AG 0.068 . BBOV_II005940 595 LNRAGIR|FV 0.181 . BBOV_II005940 607 CHCGYLR|DL 0.082 . BBOV_II005940 617 GPSILSK|QI 0.083 . BBOV_II005940 625 IGSLAGK|YY 0.070 . BBOV_II005940 641 WNVFCEK|-- 0.067 . ____________________________^_________________

  • Fasta :-

    >BBOV_II005940 ATGGGAGATAACGATTCGAATGATAAGAAGAATGCTAATAGGCATTCACTTAACGCTATT AAAGGCGGTTTTGTGAAGGATATGGTGAATCGGGGATTCAGGAAGAAGATTAATGATAGT GATAAGAATGATGATAGCAATGTTGATGGACCTTCTAATGATATCACGGATAAGGGTCAT CACCGCAATGCAGGCATAGAGGATTCAGAAAATATTTTATCTCAGGCACAATCGGATACA AAAGATAAACCATCTGTTGCCAAGTCTTTGGCCGAGAAATATGAGCGTGGTTTATTTAAT CGTAACAAAGTAGATGAATCACTTATTAGCAAAGCTGAATCTCAACCTAGTACCACACCT TCTACCTCTATGGGTTCTAGCGAAATAAAGGGTGCACGTGCTTTTGGCGGTTCATCTCAG GTAAGCTCCAATGCTGGTCGTCGTGTTCATACTTTGGCGGACACTGCTTCCACTGATGAC GCTAGTATTAGACAGGCTATGTCCCAATCCTTTTCCAGCCCTGGTGTTAGTCAGCCAGAG CAACCCGAGCGTGCCTCGCGTGGCCGTAACATGTTTGGTATGCGTCGCCGTCCATGTTGG ATTCGTATTCAAGTGAAGGAGAAGATATTTCCCGGTAAGATGGTATTGGCAATCAGTACT ACAATACTGATGATCGTAGTCTTCTTGTTCGAATTGTTACTTAACAAGACAACATTCAAT GGCCGTTGCATTGGTCAGGTAGATTACAGTAACCGCCTTGCAGGGAAATCGACACTTTCA TTCATAGGCTATGTTGGTTGTGAGAATAACCTCAAAACAACTGCTGCCGAACGTGGATTC CTTGGTGCAGCAGCAAGCGACGCTGGATACCCCGATGATATAGTTACAGATGGAAGACTC GCTCACGCTCCTGCTGTGGTAGATGGACCGAATGTTCGTATTGCATCCATAATCGGGGCT GTATCTGCCAATGAAGTTCGCTTATATAATGAGAAGTTTCGTATTCTATCGGCAATCTTT TTGCACGCTGGCTTCACACATCTTTTCACCAATTGTCTAATGAATATGTTGCTTCTCTAT GTGATTGAGCCGGACTGGGGATTCAAACGCACATCCCTATTATATTTAGTAGCCGGTATT GGAGGAAACCTTGTCCATACCAGTATGTCTCCTTGTATCCCATGCTGGGGAGCTTCCGGG TCCCTTTTTGGACTCTACGGTGCTTTTATCCCTTATACAATAGAACACTGGGATAATTTG CGCAGTCCCTTGCTCCTCTTGTTAATTTCCGTCGCATTCGTTAGCATTGAGTTTTTTTCC TTCGTACGTGGTGTGAGCAAGCATGCCCACTTGGGTGGTTTTGCGTTTGGTTTGTGTTTC GGTTTCGCCACATTGAAATCAGTATCTGCGTTTGACCGTGGTGCCTTGTGGTCACGTATA GCACTTCGGTTTTCTAGTAGGCTTTCACCAGAGGCCGTGCAGAAACACCAAGCCAAGGTT GTGAAGAGTGCTCAGTCAGAGGAGATTCTGCGTATTAAATATGAGCAGGGTGCTAAGGAT AGTGCTAATCGTCTTCGCTTTGTCAAGCGTATGTTCGGTATATATCCCTATGGCCCATAC CGTATGAGGCTGCGTGATGTACTTACTCGCGTTGTATTCCTTTGTGCCCTAGTAAGTCAA CCGGTATTTACATACACTCCTGAGCAGATCGCGATGTTTGTATTCTTCTACTATTCTACG TTTAACGAGAGGTTCTACACTTGGCTAAACCGTGCCGGCATTCGTTTTGTGTCTCCACTG TGCCATTGTGGTTATTTGCGTGATCTTACCGGTCCTTCGATTTTGTCGAAGCAAATAGGA TCACTGGCGGGAAAGTATTACTGCTTCCAAAGCGAAGCACTCTGGAATGTTTTTTGTGAG AAATAA
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  • Fasta :-

    MGDNDSNDKKNANRHSLNAIKGGFVKDMVNRGFRKKINDSDKNDDSNVDGPSNDITDKGH HRNAGIEDSENILSQAQSDTKDKPSVAKSLAEKYERGLFNRNKVDESLISKAESQPSTTP STSMGSSEIKGARAFGGSSQVSSNAGRRVHTLADTASTDDASIRQAMSQSFSSPGVSQPE QPERASRGRNMFGMRRRPCWIRIQVKEKIFPGKMVLAISTTILMIVVFLFELLLNKTTFN GRCIGQVDYSNRLAGKSTLSFIGYVGCENNLKTTAAERGFLGAAASDAGYPDDIVTDGRL AHAPAVVDGPNVRIASIIGAVSANEVRLYNEKFRILSAIFLHAGFTHLFTNCLMNMLLLY VIEPDWGFKRTSLLYLVAGIGGNLVHTSMSPCIPCWGASGSLFGLYGAFIPYTIEHWDNL RSPLLLLLISVAFVSIEFFSFVRGVSKHAHLGGFAFGLCFGFATLKSVSAFDRGALWSRI ALRFSSRLSPEAVQKHQAKVVKSAQSEEILRIKYEQGAKDSANRLRFVKRMFGIYPYGPY RMRLRDVLTRVVFLCALVSQPVFTYTPEQIAMFVFFYYSTFNERFYTWLNRAGIRFVSPL CHCGYLRDLTGPSILSKQIGSLAGKYYCFQSEALWNVFCEK

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
BBOV_II005940123 STPSTSMGSS0.994unspBBOV_II005940123 STPSTSMGSS0.994unspBBOV_II005940123 STPSTSMGSS0.994unspBBOV_II005940177 SSPGVSQPEQ0.992unspBBOV_II005940489 SSSRLSPEAV0.997unspBBOV_II00594040 SKINDSDKND0.996unspBBOV_II00594046 SKNDDSNVDG0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India