BBOV_II006070 | conserved hypothetical protein

  • Computed_GO_Component_IDs:  GO:0016021      

  • Computed_GO_Components:  integral component of membrane      

  • Computed_GO_Function_IDs:  GO:0004252      

  • Computed_GO_Functions:  serine-type endopeptidase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
BBOV_II006070OTHER0.9881930.0049810.006827
No Results

  • Fasta :-

    >BBOV_II006070 MIFSLVLNKTTFDGKCMGNVDFGYGTLGHPFHSPLGYNACTQNTKTKIIEPNFHIHQNTE GQQVLVWKENERWHDRISEPGSQSLTVLGAVDTNHIRIYGEWFRIFTGIILHAGWFHLLN NALIHFIVLYIIEPEWGFYRTLLGYFVTGCGSYLAGAVFIPCLRQIGSSGVHFGFIGAIA PYCVENWYRMGSPVIVLSLSLLVPLLDLCIKEADIGIQIHLVGFICLQGGYIFGMLYGFS TIKAVTLFDKGVPYYRFTIKFFSRWLKESTRNLYIRKVVKACQIEEMNRIQYENQAKSST CGFFFMKRLFGVYPLGPYRMRPRDWVTRGISFCLMVILMTFLILMLCFEPLYSSFNPTVS SAFTQTCICCYIKIRNKSALQRLQVLDLAGKYFCFRSKEYANRYCF
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_II006070.fa Sequence name : BBOV_II006070 Sequence length : 406 VALUES OF COMPUTED PARAMETERS Coef20 : 3.995 CoefTot : 0.109 ChDiff : 14 ZoneTo : 12 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.900 2.976 0.647 0.909 MesoH : 0.836 1.168 0.079 0.525 MuHd_075 : 26.952 22.594 8.375 5.952 MuHd_095 : 10.885 8.579 2.795 3.344 MuHd_100 : 11.838 10.137 3.351 2.890 MuHd_105 : 12.894 8.556 3.510 1.725 Hmax_075 : 19.900 19.000 4.601 5.780 Hmax_095 : 16.450 13.737 2.726 5.556 Hmax_100 : 15.700 11.200 2.144 4.950 Hmax_105 : 14.817 16.217 1.811 4.188 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9716 0.0284 DFMC : 0.9541 0.0459
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 406 BBOV_II006070 MIFSLVLNKTTFDGKCMGNVDFGYGTLGHPFHSPLGYNACTQNTKTKIIEPNFHIHQNTEGQQVLVWKENERWHDRISEP 80 GSQSLTVLGAVDTNHIRIYGEWFRIFTGIILHAGWFHLLNNALIHFIVLYIIEPEWGFYRTLLGYFVTGCGSYLAGAVFI 160 PCLRQIGSSGVHFGFIGAIAPYCVENWYRMGSPVIVLSLSLLVPLLDLCIKEADIGIQIHLVGFICLQGGYIFGMLYGFS 240 TIKAVTLFDKGVPYYRFTIKFFSRWLKESTRNLYIRKVVKACQIEEMNRIQYENQAKSSTCGFFFMKRLFGVYPLGPYRM 320 RPRDWVTRGISFCLMVILMTFLILMLCFEPLYSSFNPTVSSAFTQTCICCYIKIRNKSALQRLQVLDLAGKYFCFRSKEY 400 ANRYCF 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ...... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_II006070 9 FSLVLNK|TT 0.067 . BBOV_II006070 15 KTTFDGK|CM 0.069 . BBOV_II006070 45 ACTQNTK|TK 0.059 . BBOV_II006070 47 TQNTKTK|II 0.118 . BBOV_II006070 68 QQVLVWK|EN 0.070 . BBOV_II006070 72 VWKENER|WH 0.076 . BBOV_II006070 76 NERWHDR|IS 0.120 . BBOV_II006070 97 VDTNHIR|IY 0.096 . BBOV_II006070 104 IYGEWFR|IF 0.092 . BBOV_II006070 140 PEWGFYR|TL 0.086 . BBOV_II006070 164 VFIPCLR|QI 0.096 . BBOV_II006070 189 CVENWYR|MG 0.106 . BBOV_II006070 211 LLDLCIK|EA 0.070 . BBOV_II006070 243 YGFSTIK|AV 0.066 . BBOV_II006070 250 AVTLFDK|GV 0.077 . BBOV_II006070 256 KGVPYYR|FT 0.098 . BBOV_II006070 260 YYRFTIK|FF 0.084 . BBOV_II006070 264 TIKFFSR|WL 0.114 . BBOV_II006070 267 FFSRWLK|ES 0.139 . BBOV_II006070 271 WLKESTR|NL 0.079 . BBOV_II006070 276 TRNLYIR|KV 0.189 . BBOV_II006070 277 RNLYIRK|VV 0.099 . BBOV_II006070 280 YIRKVVK|AC 0.075 . BBOV_II006070 289 QIEEMNR|IQ 0.073 . BBOV_II006070 297 QYENQAK|SS 0.096 . BBOV_II006070 307 CGFFFMK|RL 0.067 . BBOV_II006070 308 GFFFMKR|LF 0.165 . BBOV_II006070 319 YPLGPYR|MR 0.068 . BBOV_II006070 321 LGPYRMR|PR 0.097 . BBOV_II006070 323 PYRMRPR|DW 0.120 . BBOV_II006070 328 PRDWVTR|GI 0.140 . BBOV_II006070 373 CICCYIK|IR 0.057 . BBOV_II006070 375 CCYIKIR|NK 0.099 . BBOV_II006070 377 YIKIRNK|SA 0.081 . BBOV_II006070 382 NKSALQR|LQ 0.084 . BBOV_II006070 391 VLDLAGK|YF 0.055 . BBOV_II006070 396 GKYFCFR|SK 0.144 . BBOV_II006070 398 YFCFRSK|EY 0.057 . BBOV_II006070 403 SKEYANR|YC 0.106 . ____________________________^_________________

  • Fasta :-

    >BBOV_II006070 ATGATTTTCAGTTTGGTGTTAAACAAGACAACATTTGATGGGAAATGTATGGGAAATGTG GATTTTGGTTATGGAACCTTAGGGCATCCATTCCATTCTCCTTTAGGGTATAATGCATGT ACTCAGAACACAAAAACCAAAATAATAGAACCAAATTTTCATATACATCAAAATACAGAA GGACAACAAGTGCTTGTGTGGAAAGAAAACGAAAGATGGCACGATCGTATTTCGGAGCCT GGTTCTCAGTCATTGACAGTATTGGGTGCTGTTGACACGAACCATATTCGAATATATGGC GAATGGTTTAGAATATTTACAGGCATCATACTGCATGCAGGGTGGTTCCATCTGTTAAAT AATGCATTGATCCATTTTATTGTTTTATATATAATAGAACCGGAATGGGGGTTTTACAGA ACTCTGCTAGGCTATTTTGTAACGGGTTGTGGAAGCTATCTAGCTGGAGCTGTTTTTATT CCCTGCCTTAGGCAAATAGGTTCATCAGGCGTACATTTTGGGTTTATTGGGGCCATTGCA CCGTACTGTGTTGAGAATTGGTATAGGATGGGATCGCCTGTAATAGTTTTGAGCTTGAGT TTGTTAGTACCTCTCTTGGATCTATGTATAAAAGAGGCAGATATTGGAATCCAAATACAC CTGGTAGGTTTCATCTGTCTACAAGGTGGCTATATTTTTGGTATGTTATATGGTTTTTCT ACAATAAAGGCGGTCACACTGTTTGACAAAGGAGTTCCATACTACCGATTCACTATAAAA TTTTTCAGCCGATGGCTGAAAGAAAGCACTAGAAACCTATATATACGAAAAGTTGTGAAA GCCTGTCAAATTGAAGAAATGAATCGAATACAATATGAAAACCAAGCTAAAAGCAGCACA TGTGGATTTTTCTTCATGAAACGTCTTTTCGGCGTTTATCCACTGGGACCTTATCGCATG AGACCTCGTGATTGGGTGACAAGGGGAATCAGTTTTTGTTTAATGGTAATTTTGATGACA TTTTTGATTTTAATGTTGTGTTTCGAGCCACTATACAGCAGCTTCAACCCGACGGTATCA AGTGCCTTCACACAAACATGCATTTGTTGTTATATTAAGATTAGAAATAAATCTGCTCTA CAAAGACTTCAAGTACTAGATTTGGCAGGCAAGTACTTTTGCTTTAGAAGCAAAGAGTAT GCTAACAGATATTGCTTCTAA
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  • Fasta :-

    MIFSLVLNKTTFDGKCMGNVDFGYGTLGHPFHSPLGYNACTQNTKTKIIEPNFHIHQNTE GQQVLVWKENERWHDRISEPGSQSLTVLGAVDTNHIRIYGEWFRIFTGIILHAGWFHLLN NALIHFIVLYIIEPEWGFYRTLLGYFVTGCGSYLAGAVFIPCLRQIGSSGVHFGFIGAIA PYCVENWYRMGSPVIVLSLSLLVPLLDLCIKEADIGIQIHLVGFICLQGGYIFGMLYGFS TIKAVTLFDKGVPYYRFTIKFFSRWLKESTRNLYIRKVVKACQIEEMNRIQYENQAKSST CGFFFMKRLFGVYPLGPYRMRPRDWVTRGISFCLMVILMTFLILMLCFEPLYSSFNPTVS SAFTQTCICCYIKIRNKSALQRLQVLDLAGKYFCFRSKEYANRYCF

    No Results
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India