BBOV_III003850 | mitochondrial processing peptidase alpha subunit, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0003824      GO:0046872      

  • Computed_GO_Functions:  catalytic activity      metal ion binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
BBOV_III003850OTHER0.9999530.0000260.000021
No Results

  • Fasta :-

    >BBOV_III003850 MKKAPISYEKVPFVDEDLERVMEEVPDFRFYYIGRDDGGRNPYSSIPMNEEIYAEGTEGR FEAVDNSMKFAKLENGLRIASVDRGGMDSLLGLYVGAGSRYEGADELGVSSMIENMAFHS TAHLSHLRTIKTVETLGGNASCNAFREHIAYHGECLRRDVPIMVNLLIGNVLFPRFLPWE MKASKSRLDDRRKQIMSSPDQYITELLHSVAWHNNTLGLPNYCSESSVSNFKPEVMRNFM LRHFAPNNCIIVGVNTDIAELSKWVMRAYNEYNAIEPVARNVEKPVYTGGVRYHEDNSPM LHLAVAYQIPGGWDSSELVVFTVLQSLLGGGGAFSTGGPGKGMHSRLFLNVLNKHEFVES CMAFSTVYSDAGMFGMYMVVAPQASRGAIDVMSNEFRNMLSVTPKELERAKNSLKSFLHM SLEHKAVQMEDIARQLLLCDRVLTVPELERAIDSVTALDIQRCVQSMLKGSKPSVVALGN LAFMPHPEELLKHFHF
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_III003850.fa Sequence name : BBOV_III003850 Sequence length : 496 VALUES OF COMPUTED PARAMETERS Coef20 : 3.166 CoefTot : -0.383 ChDiff : -10 ZoneTo : 8 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.747 1.682 0.259 0.680 MesoH : 0.315 0.535 -0.197 0.332 MuHd_075 : 11.677 8.043 3.596 2.491 MuHd_095 : 12.906 10.026 4.496 1.344 MuHd_100 : 24.495 15.356 7.523 3.803 MuHd_105 : 28.632 17.719 8.399 4.898 Hmax_075 : 2.683 9.100 -0.922 4.130 Hmax_095 : -7.700 5.800 -3.086 1.340 Hmax_100 : 1.100 8.400 -0.476 3.100 Hmax_105 : 12.900 13.800 1.963 4.640 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9883 0.0117 DFMC : 0.9832 0.0168
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 496 BBOV_III003850 MKKAPISYEKVPFVDEDLERVMEEVPDFRFYYIGRDDGGRNPYSSIPMNEEIYAEGTEGRFEAVDNSMKFAKLENGLRIA 80 SVDRGGMDSLLGLYVGAGSRYEGADELGVSSMIENMAFHSTAHLSHLRTIKTVETLGGNASCNAFREHIAYHGECLRRDV 160 PIMVNLLIGNVLFPRFLPWEMKASKSRLDDRRKQIMSSPDQYITELLHSVAWHNNTLGLPNYCSESSVSNFKPEVMRNFM 240 LRHFAPNNCIIVGVNTDIAELSKWVMRAYNEYNAIEPVARNVEKPVYTGGVRYHEDNSPMLHLAVAYQIPGGWDSSELVV 320 FTVLQSLLGGGGAFSTGGPGKGMHSRLFLNVLNKHEFVESCMAFSTVYSDAGMFGMYMVVAPQASRGAIDVMSNEFRNML 400 SVTPKELERAKNSLKSFLHMSLEHKAVQMEDIARQLLLCDRVLTVPELERAIDSVTALDIQRCVQSMLKGSKPSVVALGN 480 LAFMPHPEELLKHFHF 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................ 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_III003850 2 -----MK|KA 0.068 . BBOV_III003850 3 ----MKK|AP 0.103 . BBOV_III003850 10 APISYEK|VP 0.061 . BBOV_III003850 20 VDEDLER|VM 0.083 . BBOV_III003850 29 EEVPDFR|FY 0.100 . BBOV_III003850 35 RFYYIGR|DD 0.115 . BBOV_III003850 40 GRDDGGR|NP 0.087 . BBOV_III003850 60 AEGTEGR|FE 0.088 . BBOV_III003850 69 AVDNSMK|FA 0.062 . BBOV_III003850 72 NSMKFAK|LE 0.071 . BBOV_III003850 78 KLENGLR|IA 0.095 . BBOV_III003850 84 RIASVDR|GG 0.113 . BBOV_III003850 100 YVGAGSR|YE 0.089 . BBOV_III003850 128 AHLSHLR|TI 0.092 . BBOV_III003850 131 SHLRTIK|TV 0.208 . BBOV_III003850 146 ASCNAFR|EH 0.088 . BBOV_III003850 157 YHGECLR|RD 0.069 . BBOV_III003850 158 HGECLRR|DV 0.218 . BBOV_III003850 175 GNVLFPR|FL 0.107 . BBOV_III003850 182 FLPWEMK|AS 0.061 . BBOV_III003850 185 WEMKASK|SR 0.068 . BBOV_III003850 187 MKASKSR|LD 0.096 . BBOV_III003850 191 KSRLDDR|RK 0.074 . BBOV_III003850 192 SRLDDRR|KQ 0.124 . BBOV_III003850 193 RLDDRRK|QI 0.093 . BBOV_III003850 232 SSVSNFK|PE 0.059 . BBOV_III003850 237 FKPEVMR|NF 0.075 . BBOV_III003850 242 MRNFMLR|HF 0.132 . BBOV_III003850 263 DIAELSK|WV 0.073 . BBOV_III003850 267 LSKWVMR|AY 0.107 . BBOV_III003850 280 AIEPVAR|NV 0.150 . BBOV_III003850 284 VARNVEK|PV 0.103 . BBOV_III003850 292 VYTGGVR|YH 0.078 . BBOV_III003850 341 STGGPGK|GM 0.071 . BBOV_III003850 346 GKGMHSR|LF 0.113 . BBOV_III003850 354 FLNVLNK|HE 0.065 . BBOV_III003850 386 VAPQASR|GA 0.101 . BBOV_III003850 397 VMSNEFR|NM 0.092 . BBOV_III003850 405 MLSVTPK|EL 0.095 . BBOV_III003850 409 TPKELER|AK 0.078 . BBOV_III003850 411 KELERAK|NS 0.063 . BBOV_III003850 415 RAKNSLK|SF 0.070 . BBOV_III003850 425 HMSLEHK|AV 0.084 . BBOV_III003850 434 QMEDIAR|QL 0.078 . BBOV_III003850 441 QLLLCDR|VL 0.069 . BBOV_III003850 450 TVPELER|AI 0.087 . BBOV_III003850 462 TALDIQR|CV 0.108 . BBOV_III003850 469 CVQSMLK|GS 0.060 . BBOV_III003850 472 SMLKGSK|PS 0.062 . BBOV_III003850 492 HPEELLK|HF 0.064 . ____________________________^_________________

  • Fasta :-

    >BBOV_III003850 ATGAAGAAGGCTCCTATATCTTATGAGAAGGTGCCTTTTGTTGATGAGGACCTTGAGCGT GTTATGGAGGAGGTTCCTGATTTTAGGTTTTACTACATTGGTCGTGACGATGGTGGTCGT AATCCTTACAGCAGCATTCCTATGAATGAGGAGATATATGCTGAGGGCACTGAGGGTCGT TTTGAGGCTGTTGACAACAGCATGAAGTTTGCCAAGTTGGAAAACGGACTACGGATCGCA TCTGTTGACCGTGGTGGTATGGACTCTCTTTTGGGTTTATATGTTGGTGCTGGTAGCAGG TACGAGGGTGCTGATGAGCTTGGTGTTTCTTCTATGATAGAGAATATGGCATTTCACTCA ACTGCGCATCTATCTCACTTGCGTACTATTAAGACAGTGGAGACCTTGGGTGGCAATGCC AGTTGCAATGCATTCCGTGAGCACATTGCTTACCATGGTGAGTGTTTACGTCGTGACGTC CCTATAATGGTGAATCTATTGATTGGTAATGTACTATTCCCTCGTTTTTTACCTTGGGAG ATGAAAGCCAGCAAGTCACGTTTGGATGACCGACGTAAGCAGATAATGAGTTCTCCTGAC CAGTACATTACCGAGCTTTTACACTCTGTTGCTTGGCACAACAACACTTTGGGTTTGCCT AATTACTGTTCTGAATCAAGTGTTTCTAATTTCAAACCCGAGGTTATGCGTAACTTCATG TTACGTCACTTTGCTCCTAACAACTGCATCATCGTGGGTGTGAACACTGATATTGCTGAG CTTTCTAAATGGGTTATGCGTGCTTACAATGAGTACAATGCTATTGAGCCAGTTGCGCGC AATGTTGAGAAGCCTGTGTACACGGGTGGTGTGCGTTACCATGAGGACAATTCTCCAATG TTGCACTTGGCAGTTGCTTATCAGATTCCTGGTGGCTGGGATTCGTCTGAATTGGTTGTT TTCACAGTTTTGCAATCGCTTTTGGGTGGTGGCGGTGCCTTTTCCACTGGAGGTCCTGGT AAGGGTATGCACAGCAGGTTATTCCTGAACGTATTAAACAAGCACGAGTTTGTGGAGTCG TGCATGGCATTTTCTACGGTTTACAGTGATGCTGGTATGTTTGGTATGTACATGGTTGTG GCTCCTCAGGCATCTCGTGGTGCCATTGATGTGATGTCTAATGAGTTCCGCAACATGCTT TCGGTGACCCCTAAGGAGTTGGAGCGTGCGAAGAACTCTTTGAAATCGTTTTTGCACATG TCTCTTGAGCACAAGGCTGTTCAGATGGAGGACATTGCACGTCAGTTGCTGTTATGTGAT CGCGTCCTTACAGTTCCTGAGTTAGAGCGTGCCATAGACAGCGTGACTGCCTTAGACATT CAAAGATGTGTCCAGAGCATGCTTAAGGGTTCTAAGCCATCAGTGGTAGCTCTTGGTAAT TTGGCTTTTATGCCACATCCTGAGGAGCTTCTAAAGCACTTCCACTTTTAATTACCATTG ATTAGTGGGTGTAATACTACACACCTTATCACTTGGTACTAATAATAATTTGTTGCTTAC TGTTATT
  • Download Fasta

  • Fasta :-

    MKKAPISYEKVPFVDEDLERVMEEVPDFRFYYIGRDDGGRNPYSSIPMNEEIYAEGTEGR FEAVDNSMKFAKLENGLRIASVDRGGMDSLLGLYVGAGSRYEGADELGVSSMIENMAFHS TAHLSHLRTIKTVETLGGNASCNAFREHIAYHGECLRRDVPIMVNLLIGNVLFPRFLPWE MKASKSRLDDRRKQIMSSPDQYITELLHSVAWHNNTLGLPNYCSESSVSNFKPEVMRNFM LRHFAPNNCIIVGVNTDIAELSKWVMRAYNEYNAIEPVARNVEKPVYTGGVRYHEDNSPM LHLAVAYQIPGGWDSSELVVFTVLQSLLGGGGAFSTGGPGKGMHSRLFLNVLNKHEFVES CMAFSTVYSDAGMFGMYMVVAPQASRGAIDVMSNEFRNMLSVTPKELERAKNSLKSFLHM SLEHKAVQMEDIARQLLLCDRVLTVPELERAIDSVTALDIQRCVQSMLKGSKPSVVALGN LAFMPHPEELLKHFHF

    No Results
No Results
No Results
IDSitePeptideScoreMethod
BBOV_III003850186 SKASKSRLDD0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India