BBOV_III005950 | conserved hypothetical protein

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_IDPredictionOTHERSPmTPCS_Position
BBOV_III005950OTHER0.9998890.0000560.000055
No Results

  • Fasta :-

    >BBOV_III005950 MAAKSTPDHSGSYRSGHNESSDVTERFLNRIPVVCLPRNNKVPRIARSKFLVPGNMMYAE FKYILQKHLVAENASNSVYIGKNATLYLYVADKVPVSQAAIGDLYREHRSAEGILYMTYA NENSLG
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_III005950.fa Sequence name : BBOV_III005950 Sequence length : 126 VALUES OF COMPUTED PARAMETERS Coef20 : 3.237 CoefTot : 0.028 ChDiff : 4 ZoneTo : 7 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.035 0.812 -0.183 0.379 MesoH : -0.961 0.130 -0.510 0.147 MuHd_075 : 38.465 15.656 10.687 6.661 MuHd_095 : 9.537 1.918 0.415 1.919 MuHd_100 : 20.991 7.602 4.377 3.870 MuHd_105 : 26.520 10.248 6.836 4.735 Hmax_075 : 8.633 -1.867 -0.168 1.740 Hmax_095 : 0.963 -5.163 -3.853 0.849 Hmax_100 : 3.500 -2.800 -2.250 1.240 Hmax_105 : 2.333 -2.333 -2.083 1.785 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8735 0.1265 DFMC : 0.7788 0.2212
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 126 BBOV_III005950 MAAKSTPDHSGSYRSGHNESSDVTERFLNRIPVVCLPRNNKVPRIARSKFLVPGNMMYAEFKYILQKHLVAENASNSVYI 80 GKNATLYLYVADKVPVSQAAIGDLYREHRSAEGILYMTYANENSLG 160 ................................................................................ 80 ............................P................. 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ BBOV_III005950 4 ---MAAK|ST 0.085 . BBOV_III005950 14 DHSGSYR|SG 0.166 . BBOV_III005950 26 SSDVTER|FL 0.103 . BBOV_III005950 30 TERFLNR|IP 0.084 . BBOV_III005950 38 PVVCLPR|NN 0.069 . BBOV_III005950 41 CLPRNNK|VP 0.089 . BBOV_III005950 44 RNNKVPR|IA 0.173 . BBOV_III005950 47 KVPRIAR|SK 0.374 . BBOV_III005950 49 PRIARSK|FL 0.084 . BBOV_III005950 62 MMYAEFK|YI 0.074 . BBOV_III005950 67 FKYILQK|HL 0.066 . BBOV_III005950 82 NSVYIGK|NA 0.069 . BBOV_III005950 93 YLYVADK|VP 0.054 . BBOV_III005950 106 AIGDLYR|EH 0.084 . BBOV_III005950 109 DLYREHR|SA 0.624 *ProP* ____________________________^_________________

  • Fasta :-

    >BBOV_III005950 ATGGCTTAATACTACTAGTTCCAGTGCAAATGAGTTTATAAACACATGGTAGGCTGTGTA GCAATCGGAGTACACTTTTTATTGGATATCGCTGCTGGATATATGTTTTTATAATTTGTT TTCACTTGATGTGTTGGTGTGTATCGTTTTTTAACGCCGTGTCTATTTGTTTTGTTATTA CTTATCTCCCGAACTGATGGCTGCCAAGAGCACTCCGGACCATTCTGGTTCGTACAGAAG TGGTCATAATGAGTCGTCTGATGTGACAGAGCGTTTTCTAAATCGCATTCCCGTGGTATG CCTACCACGCAATAACAAGGTGCCTCGTATAGCTCGTTCAAAGTTTCTGGTGCCTGGTAA CATGATGTACGCCGAGTTCAAGTACATTCTTCAGAAGCATTTAGTAGCCGAGAATGCCAG CAACTCGGTCTATATAGGAAAGAATGCAACGTTGTATTTATATGTTGCCGACAAAGTACC TGTGTCTCAAGCTGCCATTGGCGATCTTTACCGTGAGCACCGTTCTGCTGAGGGCATTCT CTATATGACATATGCTAACGAGAATTCATTGGGTTGA
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  • Fasta :-

    MAAKSTPDHSGSYRSGHNESSDVTERFLNRIPVVCLPRNNKVPRIARSKFLVPGNMMYAE FKYILQKHLVAENASNSVYIGKNATLYLYVADKVPVSQAAIGDLYREHRSAEGILYMTYA NENSLG

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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India