BBOV_III006180 | ubiquitin carboxyl-terminal hydrolase family protein

_IDPredictionOTHERSPmTPCS_Position
BBOV_III006180OTHER0.9984170.0000980.001485
No Results

  • Fasta :-

    >BBOV_III006180 MSLESRRGKRFVLQLHDRNISFIKSSEGDEPSDLDQQSVGYFKDGKLHSSGNSKASQDAK HSFRSTLALIETLQGSDAYGVDMLPSAKRNGQFNKMAGGLHNPGINICFMNVIIQVLTHS PYLAPAMLRSGHSKVCPNAKRKMVCVTCLLESHIKRALSSPCALKNNFVYIVQKLIWKHY RLGRQEDAFIFLKHFFEALIKGCYGSKYPYTSSVIIPSKDMMQSFIGRIFGCFLLNVVIC KVCNYRSEKLETCFDISVDIYRGNKLVDLLSSFVQPELLDSANKYNCPSCKTHQRATKAM SIYRAPRIMNVVLKRFGMSETGCEKSKKEVSFPLSFSMSLNTSKHPQPVWVTYELYAVVC HLGRSLNMGHYITFIKGQHGFWHSYNDSTVTTVSQKAVLGLRQDAYLLFYAVKDECVQIC DMLVNDSAITNSFTSDVVSANRNMGSTLMQYRTDILQAESVAEDSGQQEWPACNIDEGLY RRVEISKSDDSDTTPGGDPVTIDTSTALCTKPEDATDSPVSGPALEPDLATDTSLEDRHG GPYELNRIRKRFVTRKRHGYKLRLMHLFRQHQVAAEAVDEIMRIKDRLMQHIHEQGSTSP EVEVEINPGLLYAKEDNVGTWSDAEPDAAYHELDASIHPPLPKRSQDDIDYDRGKVKKVR VEPQRPLGMPQIVQHRSGVNITVHQKDAFDRLVNGRHNTLKRGGARFRGRRKR
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_III006180.fa Sequence name : BBOV_III006180 Sequence length : 713 VALUES OF COMPUTED PARAMETERS Coef20 : 4.329 CoefTot : 0.234 ChDiff : 15 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.218 1.959 0.350 0.605 MesoH : -0.207 0.503 -0.272 0.235 MuHd_075 : 11.346 7.941 2.785 2.650 MuHd_095 : 40.060 17.137 7.841 9.339 MuHd_100 : 41.291 15.845 7.986 8.279 MuHd_105 : 36.125 13.805 7.564 6.328 Hmax_075 : -11.700 2.600 -3.044 0.200 Hmax_095 : 2.300 6.200 -2.564 3.380 Hmax_100 : 5.900 8.000 -0.494 3.600 Hmax_105 : 2.200 4.000 -1.594 1.460 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7149 0.2851 DFMC : 0.8907 0.1093
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 713 BBOV_III006180 MSLESRRGKRFVLQLHDRNISFIKSSEGDEPSDLDQQSVGYFKDGKLHSSGNSKASQDAKHSFRSTLALIETLQGSDAYG 80 VDMLPSAKRNGQFNKMAGGLHNPGINICFMNVIIQVLTHSPYLAPAMLRSGHSKVCPNAKRKMVCVTCLLESHIKRALSS 160 PCALKNNFVYIVQKLIWKHYRLGRQEDAFIFLKHFFEALIKGCYGSKYPYTSSVIIPSKDMMQSFIGRIFGCFLLNVVIC 240 KVCNYRSEKLETCFDISVDIYRGNKLVDLLSSFVQPELLDSANKYNCPSCKTHQRATKAMSIYRAPRIMNVVLKRFGMSE 320 TGCEKSKKEVSFPLSFSMSLNTSKHPQPVWVTYELYAVVCHLGRSLNMGHYITFIKGQHGFWHSYNDSTVTTVSQKAVLG 400 LRQDAYLLFYAVKDECVQICDMLVNDSAITNSFTSDVVSANRNMGSTLMQYRTDILQAESVAEDSGQQEWPACNIDEGLY 480 RRVEISKSDDSDTTPGGDPVTIDTSTALCTKPEDATDSPVSGPALEPDLATDTSLEDRHGGPYELNRIRKRFVTRKRHGY 560 KLRLMHLFRQHQVAAEAVDEIMRIKDRLMQHIHEQGSTSPEVEVEINPGLLYAKEDNVGTWSDAEPDAAYHELDASIHPP 640 LPKRSQDDIDYDRGKVKKVRVEPQRPLGMPQIVQHRSGVNITVHQKDAFDRLVNGRHNTLKRGGARFRGRRKR 720 .........P...................................................................... 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ........................................................................P 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 2 Name Pos Context Score Pred ____________________________v_________________ BBOV_III006180 6 -MSLESR|RG 0.074 . BBOV_III006180 7 MSLESRR|GK 0.145 . BBOV_III006180 9 LESRRGK|RF 0.152 . BBOV_III006180 10 ESRRGKR|FV 0.755 *ProP* BBOV_III006180 18 VLQLHDR|NI 0.107 . BBOV_III006180 24 RNISFIK|SS 0.112 . BBOV_III006180 43 QSVGYFK|DG 0.059 . BBOV_III006180 46 GYFKDGK|LH 0.061 . BBOV_III006180 54 HSSGNSK|AS 0.086 . BBOV_III006180 60 KASQDAK|HS 0.083 . BBOV_III006180 64 DAKHSFR|ST 0.162 . BBOV_III006180 88 DMLPSAK|RN 0.067 . BBOV_III006180 89 MLPSAKR|NG 0.114 . BBOV_III006180 95 RNGQFNK|MA 0.102 . BBOV_III006180 129 LAPAMLR|SG 0.097 . BBOV_III006180 134 LRSGHSK|VC 0.081 . BBOV_III006180 140 KVCPNAK|RK 0.065 . BBOV_III006180 141 VCPNAKR|KM 0.109 . BBOV_III006180 142 CPNAKRK|MV 0.150 . BBOV_III006180 155 LLESHIK|RA 0.061 . BBOV_III006180 156 LESHIKR|AL 0.212 . BBOV_III006180 165 SSPCALK|NN 0.066 . BBOV_III006180 174 FVYIVQK|LI 0.065 . BBOV_III006180 178 VQKLIWK|HY 0.060 . BBOV_III006180 181 LIWKHYR|LG 0.098 . BBOV_III006180 184 KHYRLGR|QE 0.277 . BBOV_III006180 193 DAFIFLK|HF 0.064 . BBOV_III006180 201 FFEALIK|GC 0.057 . BBOV_III006180 207 KGCYGSK|YP 0.060 . BBOV_III006180 219 SVIIPSK|DM 0.077 . BBOV_III006180 228 MQSFIGR|IF 0.124 . BBOV_III006180 241 LNVVICK|VC 0.056 . BBOV_III006180 246 CKVCNYR|SE 0.089 . BBOV_III006180 249 CNYRSEK|LE 0.093 . BBOV_III006180 262 ISVDIYR|GN 0.083 . BBOV_III006180 265 DIYRGNK|LV 0.095 . BBOV_III006180 284 LLDSANK|YN 0.067 . BBOV_III006180 291 YNCPSCK|TH 0.069 . BBOV_III006180 295 SCKTHQR|AT 0.094 . BBOV_III006180 298 THQRATK|AM 0.168 . BBOV_III006180 304 KAMSIYR|AP 0.085 . BBOV_III006180 307 SIYRAPR|IM 0.263 . BBOV_III006180 314 IMNVVLK|RF 0.089 . BBOV_III006180 315 MNVVLKR|FG 0.218 . BBOV_III006180 325 SETGCEK|SK 0.063 . BBOV_III006180 327 TGCEKSK|KE 0.060 . BBOV_III006180 328 GCEKSKK|EV 0.170 . BBOV_III006180 344 MSLNTSK|HP 0.067 . BBOV_III006180 364 VVCHLGR|SL 0.119 . BBOV_III006180 376 HYITFIK|GQ 0.066 . BBOV_III006180 396 VTTVSQK|AV 0.068 . BBOV_III006180 402 KAVLGLR|QD 0.069 . BBOV_III006180 413 LLFYAVK|DE 0.074 . BBOV_III006180 442 DVVSANR|NM 0.084 . BBOV_III006180 452 STLMQYR|TD 0.079 . BBOV_III006180 481 IDEGLYR|RV 0.114 . BBOV_III006180 482 DEGLYRR|VE 0.087 . BBOV_III006180 487 RRVEISK|SD 0.080 . BBOV_III006180 511 STALCTK|PE 0.060 . BBOV_III006180 538 DTSLEDR|HG 0.117 . BBOV_III006180 547 GPYELNR|IR 0.081 . BBOV_III006180 549 YELNRIR|KR 0.071 . BBOV_III006180 550 ELNRIRK|RF 0.188 . BBOV_III006180 551 LNRIRKR|FV 0.495 . BBOV_III006180 555 RKRFVTR|KR 0.099 . BBOV_III006180 556 KRFVTRK|RH 0.113 . BBOV_III006180 557 RFVTRKR|HG 0.173 . BBOV_III006180 561 RKRHGYK|LR 0.066 . BBOV_III006180 563 RHGYKLR|LM 0.095 . BBOV_III006180 569 RLMHLFR|QH 0.095 . BBOV_III006180 583 AVDEIMR|IK 0.075 . BBOV_III006180 585 DEIMRIK|DR 0.062 . BBOV_III006180 587 IMRIKDR|LM 0.099 . BBOV_III006180 614 PGLLYAK|ED 0.059 . BBOV_III006180 643 IHPPLPK|RS 0.060 . BBOV_III006180 644 HPPLPKR|SQ 0.327 . BBOV_III006180 653 DDIDYDR|GK 0.080 . BBOV_III006180 655 IDYDRGK|VK 0.057 . BBOV_III006180 657 YDRGKVK|KV 0.084 . BBOV_III006180 658 DRGKVKK|VR 0.092 . BBOV_III006180 660 GKVKKVR|VE 0.089 . BBOV_III006180 665 VRVEPQR|PL 0.105 . BBOV_III006180 676 PQIVQHR|SG 0.108 . BBOV_III006180 686 NITVHQK|DA 0.080 . BBOV_III006180 691 QKDAFDR|LV 0.128 . BBOV_III006180 696 DRLVNGR|HN 0.100 . BBOV_III006180 701 GRHNTLK|RG 0.081 . BBOV_III006180 702 RHNTLKR|GG 0.178 . BBOV_III006180 706 LKRGGAR|FR 0.109 . BBOV_III006180 708 RGGARFR|GR 0.096 . BBOV_III006180 710 GARFRGR|RK 0.099 . BBOV_III006180 711 ARFRGRR|KR 0.350 . BBOV_III006180 712 RFRGRRK|R- 0.080 . BBOV_III006180 713 FRGRRKR|-- 0.740 *ProP* ____________________________^_________________

  • Fasta :-

    >BBOV_III006180 ATGAGTTTAGAGAGCAGGCGTGGCAAGCGCTTTGTCCTTCAACTACATGATCGCAACATT AGTTTTATCAAGTCTTCGGAAGGTGATGAACCGTCTGACTTAGATCAACAGTCCGTTGGT TATTTTAAGGATGGGAAACTGCATTCTTCTGGTAATAGCAAGGCATCTCAAGATGCTAAG CATTCATTTAGGTCTACGCTTGCGTTGATAGAGACACTTCAGGGCAGCGATGCTTATGGC GTAGACATGTTACCTAGCGCTAAGCGCAATGGCCAGTTTAACAAGATGGCTGGTGGTCTT CATAATCCTGGTATTAACATTTGCTTCATGAATGTTATTATCCAGGTACTTACTCATTCT CCCTATTTGGCACCTGCTATGCTGCGTTCAGGTCACTCTAAGGTCTGTCCCAATGCGAAG CGTAAGATGGTTTGTGTAACTTGTTTACTAGAGTCCCACATAAAACGTGCTTTGAGCTCT CCCTGTGCTTTGAAAAATAACTTTGTCTACATTGTGCAGAAGTTAATTTGGAAGCATTAT AGGCTAGGTAGACAGGAGGATGCCTTTATATTTTTGAAGCATTTTTTTGAGGCTCTCATT AAAGGTTGTTACGGTTCTAAGTACCCTTACACTTCTAGTGTGATAATACCTTCTAAGGAC ATGATGCAGAGTTTCATAGGTCGCATCTTTGGTTGCTTTCTTTTGAATGTTGTAATTTGC AAGGTCTGCAATTACCGTTCGGAGAAGCTCGAGACATGTTTTGACATATCGGTTGACATA TACCGTGGTAACAAGCTTGTTGATTTGTTATCTTCGTTTGTGCAGCCTGAGTTACTGGAC AGTGCCAACAAGTACAACTGTCCGTCTTGTAAGACACATCAGCGTGCTACCAAGGCCATG TCTATTTATCGTGCACCTCGTATAATGAATGTAGTACTTAAGCGTTTTGGCATGTCTGAA ACTGGTTGTGAGAAGTCTAAGAAGGAGGTATCATTTCCTTTAAGTTTCTCTATGTCGTTG AACACCTCTAAGCATCCGCAGCCTGTATGGGTTACTTACGAGCTTTATGCTGTCGTATGT CACCTTGGGAGATCATTGAACATGGGCCATTACATAACGTTTATTAAGGGCCAGCATGGC TTTTGGCACAGCTATAATGACTCCACTGTGACTACCGTATCGCAGAAGGCGGTGCTCGGC CTTCGGCAGGATGCCTATCTTTTGTTTTACGCTGTTAAGGATGAGTGCGTTCAGATTTGT GACATGCTTGTTAATGACAGTGCCATAACTAACAGTTTCACTAGTGACGTTGTTTCTGCC AATCGCAACATGGGATCTACGTTAATGCAGTACCGTACTGATATTCTTCAGGCTGAGTCT GTGGCTGAGGACTCTGGTCAGCAGGAGTGGCCTGCGTGCAACATTGACGAGGGTTTGTAC CGTCGTGTTGAAATTTCAAAATCAGATGACTCCGACACCACCCCGGGTGGTGACCCTGTT ACTATAGACACTAGCACTGCTCTGTGCACCAAACCAGAGGATGCAACAGACTCCCCGGTA TCAGGGCCTGCGCTGGAACCTGACCTTGCAACCGACACGTCCCTGGAGGACCGCCATGGC GGTCCTTATGAACTCAACAGAATACGCAAGCGCTTCGTCACCAGGAAGAGGCACGGTTAC AAACTGAGGCTAATGCATCTCTTCAGGCAACACCAGGTTGCTGCCGAGGCTGTGGATGAA ATAATGCGCATCAAGGACCGGTTGATGCAACACATTCACGAGCAGGGTAGCACCTCGCCA GAGGTCGAGGTGGAGATCAACCCCGGGTTGCTGTATGCCAAGGAAGACAACGTGGGTACA TGGTCCGATGCGGAGCCTGATGCTGCGTATCACGAGCTGGATGCCAGCATCCACCCACCA CTACCCAAACGGTCCCAGGATGACATAGACTACGACCGGGGCAAGGTCAAGAAGGTACGC GTTGAGCCTCAGAGGCCTCTCGGCATGCCTCAAATCGTGCAGCACAGGTCTGGTGTCAAC ATTACGGTGCATCAGAAGGACGCTTTCGATCGACTGGTGAACGGGCGCCACAACACGTTG AAACGGGGTGGCGCTCGATTCAGGGGTCGGCGAAAGCGCTGA
  • Download Fasta

  • Fasta :-

    MSLESRRGKRFVLQLHDRNISFIKSSEGDEPSDLDQQSVGYFKDGKLHSSGNSKASQDAK HSFRSTLALIETLQGSDAYGVDMLPSAKRNGQFNKMAGGLHNPGINICFMNVIIQVLTHS PYLAPAMLRSGHSKVCPNAKRKMVCVTCLLESHIKRALSSPCALKNNFVYIVQKLIWKHY RLGRQEDAFIFLKHFFEALIKGCYGSKYPYTSSVIIPSKDMMQSFIGRIFGCFLLNVVIC KVCNYRSEKLETCFDISVDIYRGNKLVDLLSSFVQPELLDSANKYNCPSCKTHQRATKAM SIYRAPRIMNVVLKRFGMSETGCEKSKKEVSFPLSFSMSLNTSKHPQPVWVTYELYAVVC HLGRSLNMGHYITFIKGQHGFWHSYNDSTVTTVSQKAVLGLRQDAYLLFYAVKDECVQIC DMLVNDSAITNSFTSDVVSANRNMGSTLMQYRTDILQAESVAEDSGQQEWPACNIDEGLY RRVEISKSDDSDTTPGGDPVTIDTSTALCTKPEDATDSPVSGPALEPDLATDTSLEDRHG GPYELNRIRKRFVTRKRHGYKLRLMHLFRQHQVAAEAVDEIMRIKDRLMQHIHEQGSTSP EVEVEINPGLLYAKEDNVGTWSDAEPDAAYHELDASIHPPLPKRSQDDIDYDRGKVKKVR VEPQRPLGMPQIVQHRSGVNITVHQKDAFDRLVNGRHNTLKRGGARFRGRRKR

  • title: Active Site
  • coordinates: N102,C108,H370,D387
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
BBOV_III006180326 SGCEKSKKEV0.992unspBBOV_III006180326 SGCEKSKKEV0.992unspBBOV_III006180326 SGCEKSKKEV0.992unspBBOV_III006180486 SRVEISKSDD0.995unspBBOV_III006180599 SQGSTSPEVE0.996unspBBOV_III006180645 SLPKRSQDDI0.994unspBBOV_III00618026 SFIKSSEGDE0.992unspBBOV_III006180301 STKAMSIYRA0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India