BBOV_III008630 | ubiquitin carboxyl-terminal hydrolase family protein

_IDPredictionOTHERSPmTPCS_Position
BBOV_III008630OTHER0.9999580.0000200.000022
No Results

  • Fasta :-

    >BBOV_III008630 MGEGDDIVRVTVKWMGKQFNDLELNLSESLELFRVQLFSLTGVPPERQKLMFKGLLSDSI DLRNTGICNGSKIMMIGNPEKVVENEAPVRFYEFMTPQEKSEFLSANKTRRLPCGIMNLG NTCYFNSVFQFLLPVSELWESVDLLRAKDATDSDQDQYKLALSLAEMRHQLPKSISKYVP LAQVQLLRKVNPLFSRTDEKTGLYMQQDAEECLSCILSCINGLSDSKLTDDYFGYTLSTV IRRKDTPDGVAAPPVGDTLKERSIKLNCYMGTQLTSVSTLMDGIALSLNEELTKFSSEAG CDVIHEKVSRISELPKYLIVHLVRFEWKQESDVSKTNAVKAKVCRRVNFERELDITSICS EEIKPLVLAGNAMAMRKDFNLEPSGEHESFQGYELYPGKYATGKYQLEAIVTHQGRSADG GHYVCWAKDPREDTEGSNDKNDQWLMFDDDKVTEYRWGNFDLCGGRGDFHIAVLLLYKAQ YVSIEKEPSVEGAPEA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_III008630.fa Sequence name : BBOV_III008630 Sequence length : 496 VALUES OF COMPUTED PARAMETERS Coef20 : 3.369 CoefTot : -0.250 ChDiff : -16 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.941 1.053 0.132 0.462 MesoH : -0.892 0.152 -0.373 0.122 MuHd_075 : 24.115 12.815 6.967 4.871 MuHd_095 : 42.242 20.845 11.376 7.511 MuHd_100 : 42.377 19.102 10.210 7.036 MuHd_105 : 37.044 14.555 7.593 5.927 Hmax_075 : -4.987 4.700 -2.705 2.320 Hmax_095 : 15.200 13.300 2.786 5.150 Hmax_100 : 10.600 7.900 0.227 3.540 Hmax_105 : 10.937 6.125 -0.567 3.649 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8657 0.1343 DFMC : 0.8901 0.1099
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 496 BBOV_III008630 MGEGDDIVRVTVKWMGKQFNDLELNLSESLELFRVQLFSLTGVPPERQKLMFKGLLSDSIDLRNTGICNGSKIMMIGNPE 80 KVVENEAPVRFYEFMTPQEKSEFLSANKTRRLPCGIMNLGNTCYFNSVFQFLLPVSELWESVDLLRAKDATDSDQDQYKL 160 ALSLAEMRHQLPKSISKYVPLAQVQLLRKVNPLFSRTDEKTGLYMQQDAEECLSCILSCINGLSDSKLTDDYFGYTLSTV 240 IRRKDTPDGVAAPPVGDTLKERSIKLNCYMGTQLTSVSTLMDGIALSLNEELTKFSSEAGCDVIHEKVSRISELPKYLIV 320 HLVRFEWKQESDVSKTNAVKAKVCRRVNFERELDITSICSEEIKPLVLAGNAMAMRKDFNLEPSGEHESFQGYELYPGKY 400 ATGKYQLEAIVTHQGRSADGGHYVCWAKDPREDTEGSNDKNDQWLMFDDDKVTEYRWGNFDLCGGRGDFHIAVLLLYKAQ 480 YVSIEKEPSVEGAPEA 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................ 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_III008630 9 EGDDIVR|VT 0.067 . BBOV_III008630 13 IVRVTVK|WM 0.088 . BBOV_III008630 17 TVKWMGK|QF 0.068 . BBOV_III008630 34 ESLELFR|VQ 0.069 . BBOV_III008630 47 TGVPPER|QK 0.075 . BBOV_III008630 49 VPPERQK|LM 0.065 . BBOV_III008630 53 RQKLMFK|GL 0.060 . BBOV_III008630 63 SDSIDLR|NT 0.124 . BBOV_III008630 72 GICNGSK|IM 0.062 . BBOV_III008630 81 MIGNPEK|VV 0.079 . BBOV_III008630 90 ENEAPVR|FY 0.111 . BBOV_III008630 100 FMTPQEK|SE 0.061 . BBOV_III008630 108 EFLSANK|TR 0.048 . BBOV_III008630 110 LSANKTR|RL 0.136 . BBOV_III008630 111 SANKTRR|LP 0.172 . BBOV_III008630 146 ESVDLLR|AK 0.083 . BBOV_III008630 148 VDLLRAK|DA 0.088 . BBOV_III008630 159 SDQDQYK|LA 0.069 . BBOV_III008630 168 LSLAEMR|HQ 0.072 . BBOV_III008630 173 MRHQLPK|SI 0.174 . BBOV_III008630 177 LPKSISK|YV 0.084 . BBOV_III008630 188 AQVQLLR|KV 0.109 . BBOV_III008630 189 QVQLLRK|VN 0.060 . BBOV_III008630 196 VNPLFSR|TD 0.086 . BBOV_III008630 200 FSRTDEK|TG 0.058 . BBOV_III008630 227 NGLSDSK|LT 0.059 . BBOV_III008630 242 TLSTVIR|RK 0.102 . BBOV_III008630 243 LSTVIRR|KD 0.121 . BBOV_III008630 244 STVIRRK|DT 0.124 . BBOV_III008630 260 PVGDTLK|ER 0.065 . BBOV_III008630 262 GDTLKER|SI 0.124 . BBOV_III008630 265 LKERSIK|LN 0.143 . BBOV_III008630 294 LNEELTK|FS 0.083 . BBOV_III008630 307 CDVIHEK|VS 0.063 . BBOV_III008630 310 IHEKVSR|IS 0.076 . BBOV_III008630 316 RISELPK|YL 0.088 . BBOV_III008630 324 LIVHLVR|FE 0.115 . BBOV_III008630 328 LVRFEWK|QE 0.076 . BBOV_III008630 335 QESDVSK|TN 0.075 . BBOV_III008630 340 SKTNAVK|AK 0.057 . BBOV_III008630 342 TNAVKAK|VC 0.093 . BBOV_III008630 345 VKAKVCR|RV 0.137 . BBOV_III008630 346 KAKVCRR|VN 0.132 . BBOV_III008630 351 RRVNFER|EL 0.105 . BBOV_III008630 364 ICSEEIK|PL 0.071 . BBOV_III008630 376 GNAMAMR|KD 0.107 . BBOV_III008630 377 NAMAMRK|DF 0.096 . BBOV_III008630 399 YELYPGK|YA 0.071 . BBOV_III008630 404 GKYATGK|YQ 0.081 . BBOV_III008630 416 IVTHQGR|SA 0.248 . BBOV_III008630 428 HYVCWAK|DP 0.067 . BBOV_III008630 431 CWAKDPR|ED 0.097 . BBOV_III008630 440 TEGSNDK|ND 0.061 . BBOV_III008630 451 LMFDDDK|VT 0.059 . BBOV_III008630 456 DKVTEYR|WG 0.081 . BBOV_III008630 466 FDLCGGR|GD 0.073 . BBOV_III008630 478 AVLLLYK|AQ 0.058 . BBOV_III008630 486 QYVSIEK|EP 0.056 . ____________________________^_________________

  • Fasta :-

    >BBOV_III008630 ATGGGTGAGGGTGACGATATAGTCCGAGTGACGGTAAAATGGATGGGCAAGCAGTTTAAC GATCTTGAGCTAAATCTTAGTGAGTCATTGGAGTTGTTTCGTGTACAGCTCTTTTCTCTT ACGGGTGTACCGCCTGAACGTCAGAAGCTTATGTTTAAAGGGCTTCTGTCCGATAGCATT GATCTCCGTAACACTGGTATTTGCAATGGTTCTAAGATTATGATGATCGGCAATCCTGAA AAGGTTGTAGAAAATGAAGCTCCCGTACGCTTTTACGAGTTTATGACACCTCAGGAGAAA TCTGAGTTCCTCTCGGCTAATAAGACACGAAGACTACCTTGTGGTATAATGAACTTGGGT AATACTTGCTATTTTAACTCTGTTTTTCAGTTTTTGCTTCCTGTATCTGAATTATGGGAA TCCGTAGATCTGCTACGTGCTAAAGACGCTACTGACTCTGACCAAGATCAATATAAACTT GCTCTTTCATTGGCTGAGATGCGTCATCAGTTACCAAAATCAATTTCTAAATATGTTCCT TTAGCACAGGTACAGCTGCTTCGTAAGGTGAATCCTCTCTTTAGCCGCACTGACGAGAAG ACGGGGCTTTATATGCAGCAAGACGCTGAGGAATGCTTAAGTTGCATTCTAAGTTGCATC AATGGTTTGAGCGATTCTAAATTAACCGATGATTACTTTGGTTATACTCTATCAACTGTT ATTCGTAGGAAAGACACCCCTGACGGTGTGGCAGCACCTCCCGTTGGTGACACATTAAAG GAGCGCAGCATAAAGTTGAATTGTTATATGGGCACTCAGCTGACTTCTGTATCTACACTT ATGGATGGTATAGCATTGTCGCTGAATGAAGAATTGACGAAATTCAGTTCTGAGGCGGGC TGCGACGTGATTCATGAGAAAGTTTCGAGGATTTCTGAGCTTCCCAAGTACCTTATTGTA CACTTGGTTCGTTTTGAGTGGAAGCAAGAGAGTGACGTATCAAAGACCAATGCAGTGAAA GCAAAGGTGTGCCGTCGCGTCAACTTTGAGCGCGAGCTTGACATAACATCCATATGTTCT GAGGAGATTAAACCGTTAGTTCTCGCTGGCAATGCTATGGCAATGCGTAAGGACTTTAAC CTAGAGCCATCTGGTGAGCACGAATCTTTTCAGGGTTACGAGTTGTACCCGGGAAAATAT GCCACTGGTAAATACCAGCTTGAAGCTATTGTAACTCACCAGGGCAGAAGTGCTGATGGA GGGCATTATGTTTGCTGGGCTAAGGATCCGCGGGAGGACACAGAGGGCAGCAATGACAAG AATGATCAGTGGTTGATGTTCGACGACGACAAAGTCACTGAATACCGTTGGGGTAATTTC GATCTCTGCGGTGGCAGAGGTGACTTTCACATCGCAGTTTTGCTGCTCTATAAAGCGCAG TACGTCAGCATAGAGAAGGAGCCTTCAGTTGAGGGTGCTCCAGAGGCTTGA
  • Download Fasta

  • Fasta :-

    MGEGDDIVRVTVKWMGKQFNDLELNLSESLELFRVQLFSLTGVPPERQKLMFKGLLSDSI DLRNTGICNGSKIMMIGNPEKVVENEAPVRFYEFMTPQEKSEFLSANKTRRLPCGIMNLG NTCYFNSVFQFLLPVSELWESVDLLRAKDATDSDQDQYKLALSLAEMRHQLPKSISKYVP LAQVQLLRKVNPLFSRTDEKTGLYMQQDAEECLSCILSCINGLSDSKLTDDYFGYTLSTV IRRKDTPDGVAAPPVGDTLKERSIKLNCYMGTQLTSVSTLMDGIALSLNEELTKFSSEAG CDVIHEKVSRISELPKYLIVHLVRFEWKQESDVSKTNAVKAKVCRRVNFERELDITSICS EEIKPLVLAGNAMAMRKDFNLEPSGEHESFQGYELYPGKYATGKYQLEAIVTHQGRSADG GHYVCWAKDPREDTEGSNDKNDQWLMFDDDKVTEYRWGNFDLCGGRGDFHIAVLLLYKAQ YVSIEKEPSVEGAPEA

  • title: Active Site
  • coordinates: N118,C123,H422,D449
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
BBOV_III008630246 TRRKDTPDGV0.994unspBBOV_III008630489 SEKEPSVEGA0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India