BBOV_III008650 | methionine aminopeptidase, putative

_IDPredictionOTHERSPmTPCS_Position
BBOV_III008650OTHER0.8739480.0023150.123737
No Results

  • Fasta :-

    >BBOV_III008650 MVFYKSLYRCSVLSPKLILEKTPLGKYLSRSKKLGERQLLRYGEFQVLPSHHIPSHIALP PYASIRDPSELRAYYNKACTFAEVKSQSQIALMRAAAKIAAGCLKHCINITKEGVTAEDI DREGHEYIVSQGSYPAGVGFHGFPKAICISINEVACHGIPNTRPFQRGDIVSYDCTVFHG GVYGDCAGTIIVGDDSATDASGSLLVRIAKECVDKAIASVAPGVEFSKLAEIVTEHASKN SLGVIKEFGGHFIGDMMHMPPMVQFCHPSTTRGQMESGQIFTIEPIICEGNPEIYTWRDG WTIATCDGGRCAQFEHTVLVTDTGCEILTQ
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_III008650.fa Sequence name : BBOV_III008650 Sequence length : 330 VALUES OF COMPUTED PARAMETERS Coef20 : 4.317 CoefTot : -0.704 ChDiff : -4 ZoneTo : 35 KR : 8 DE : 1 CleavSite : 11 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.935 1.124 0.193 0.560 MesoH : -0.269 0.477 -0.200 0.262 MuHd_075 : 50.001 29.134 14.018 10.648 MuHd_095 : 43.191 19.627 12.375 7.536 MuHd_100 : 40.809 18.166 11.644 7.410 MuHd_105 : 33.840 20.172 9.791 7.067 Hmax_075 : 13.387 14.438 2.427 4.865 Hmax_095 : 15.600 15.800 4.212 4.730 Hmax_100 : 15.600 15.800 4.212 4.730 Hmax_105 : 4.300 13.067 -0.115 3.523 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0796 0.9204 DFMC : 0.0891 0.9109 This protein is probably imported in mitochondria. f(Ser) = 0.1429 f(Arg) = 0.0571 CMi = 0.95238 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 330 BBOV_III008650 MVFYKSLYRCSVLSPKLILEKTPLGKYLSRSKKLGERQLLRYGEFQVLPSHHIPSHIALPPYASIRDPSELRAYYNKACT 80 FAEVKSQSQIALMRAAAKIAAGCLKHCINITKEGVTAEDIDREGHEYIVSQGSYPAGVGFHGFPKAICISINEVACHGIP 160 NTRPFQRGDIVSYDCTVFHGGVYGDCAGTIIVGDDSATDASGSLLVRIAKECVDKAIASVAPGVEFSKLAEIVTEHASKN 240 SLGVIKEFGGHFIGDMMHMPPMVQFCHPSTTRGQMESGQIFTIEPIICEGNPEIYTWRDGWTIATCDGGRCAQFEHTVLV 320 TDTGCEILTQ 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .......... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_III008650 5 --MVFYK|SL 0.087 . BBOV_III008650 9 FYKSLYR|CS 0.065 . BBOV_III008650 16 CSVLSPK|LI 0.062 . BBOV_III008650 21 PKLILEK|TP 0.052 . BBOV_III008650 26 EKTPLGK|YL 0.071 . BBOV_III008650 30 LGKYLSR|SK 0.145 . BBOV_III008650 32 KYLSRSK|KL 0.058 . BBOV_III008650 33 YLSRSKK|LG 0.445 . BBOV_III008650 37 SKKLGER|QL 0.080 . BBOV_III008650 41 GERQLLR|YG 0.087 . BBOV_III008650 66 PPYASIR|DP 0.126 . BBOV_III008650 72 RDPSELR|AY 0.084 . BBOV_III008650 77 LRAYYNK|AC 0.074 . BBOV_III008650 85 CTFAEVK|SQ 0.078 . BBOV_III008650 94 SQIALMR|AA 0.119 . BBOV_III008650 98 LMRAAAK|IA 0.086 . BBOV_III008650 105 IAAGCLK|HC 0.069 . BBOV_III008650 112 HCINITK|EG 0.065 . BBOV_III008650 122 TAEDIDR|EG 0.083 . BBOV_III008650 145 GFHGFPK|AI 0.085 . BBOV_III008650 163 HGIPNTR|PF 0.082 . BBOV_III008650 167 NTRPFQR|GD 0.113 . BBOV_III008650 207 SGSLLVR|IA 0.100 . BBOV_III008650 210 LLVRIAK|EC 0.115 . BBOV_III008650 215 AKECVDK|AI 0.074 . BBOV_III008650 228 PGVEFSK|LA 0.071 . BBOV_III008650 239 VTEHASK|NS 0.067 . BBOV_III008650 246 NSLGVIK|EF 0.072 . BBOV_III008650 272 CHPSTTR|GQ 0.088 . BBOV_III008650 298 PEIYTWR|DG 0.102 . BBOV_III008650 310 ATCDGGR|CA 0.082 . ____________________________^_________________

  • Fasta :-

    >BBOV_III008650 ATCTTTCATAACTTGTCATAATGGTGTTTTATAAGTCCTTATACAGATGTTCTGTACTAT CGCCTAAACTGATACTTGAGAAGACTCCACTTGGGAAATACCTATCTCGAAGCAAAAAAC TAGGTGAAAGGCAACTTTTACGCTACGGAGAGTTCCAAGTTTTACCATCGCATCATATTC CATCGCACATAGCACTGCCACCATACGCTTCCATTCGAGACCCATCTGAGTTGCGTGCAT ATTACAACAAGGCATGCACATTTGCCGAGGTGAAGTCTCAATCGCAAATTGCGTTGATGC GTGCTGCGGCTAAAATAGCTGCAGGATGCCTTAAGCACTGTATCAACATTACTAAAGAAG GCGTCACTGCCGAAGACATTGATCGGGAAGGACACGAGTACATAGTATCGCAGGGCTCTT ACCCAGCTGGTGTGGGATTTCATGGGTTTCCTAAAGCTATATGCATTTCCATAAACGAAG TGGCTTGTCACGGTATTCCTAATACGCGACCGTTTCAACGTGGTGACATCGTATCTTACG ATTGCACAGTGTTCCACGGCGGAGTATATGGTGACTGTGCAGGCACAATAATCGTTGGCG ACGATTCGGCCACTGATGCATCAGGAAGTTTGCTTGTTCGTATTGCTAAAGAATGTGTCG ATAAAGCTATCGCCTCGGTAGCACCGGGGGTTGAGTTTTCAAAACTAGCTGAAATAGTCA CTGAACACGCATCCAAAAATAGTTTGGGTGTTATAAAAGAGTTCGGAGGCCACTTTATTG GCGATATGATGCATATGCCTCCAATGGTTCAATTTTGTCATCCTAGCACAACTAGGGGGC AAATGGAATCTGGACAAATATTCACCATTGAGCCCATAATATGCGAAGGAAACCCTGAAA TATACACCTGGCGTGATGGCTGGACTATTGCAACATGTGATGGCGGTCGTTGTGCTCAGT TTGAACATACAGTTCTGGTTACTGATACTGGTTGTGAAATACTAACCCAATGA
  • Download Fasta

  • Fasta :-

    MVFYKSLYRCSVLSPKLILEKTPLGKYLSRSKKLGERQLLRYGEFQVLPSHHIPSHIALP PYASIRDPSELRAYYNKACTFAEVKSQSQIALMRAAAKIAAGCLKHCINITKEGVTAEDI DREGHEYIVSQGSYPAGVGFHGFPKAICISINEVACHGIPNTRPFQRGDIVSYDCTVFHG GVYGDCAGTIIVGDDSATDASGSLLVRIAKECVDKAIASVAPGVEFSKLAEIVTEHASKN SLGVIKEFGGHFIGDMMHMPPMVQFCHPSTTRGQMESGQIFTIEPIICEGNPEIYTWRDG WTIATCDGGRCAQFEHTVLVTDTGCEILTQ

  • title: active site
  • coordinates: H157,D174,D185,H251,E284,E315
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
BBOV_III00865031 SYLSRSKKLG0.991unspBBOV_III008650196 SVGDDSATDA0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India