BBOV_IV004350 | ubiquitin carboxyl-terminal hydrolase, putative

_IDPredictionOTHERSPmTPCS_Position
BBOV_IV004350OTHER0.9950310.0006180.004350
No Results

  • Fasta :-

    >BBOV_IV004350 MKEAEPLAKLAQTSGLKTPSRSTAVHKDECIYSTDTDKSPDGIYINLKSFESFGKGVLHL DTSGDNAIYLHVKRVLVPVNPEVNYSEDVTLDKVDSSTAINKEPGSTTNETAIVYKQKKT CDEVVEYEIYCPSLGLTVPLESAPQGLATICKAVIDHEAFNFNPDEFVWKDYLNESKYAE HLIQVEAPPVIKYENLVCDRCGAATNLWLNLSDGYIGCGRKNYDSGGCADGEEGAAIQHY NETGGIYPLAVKVGTITATSGDVFSYAADEDCLVTDPYLSVHLAHFGIDVSNLTKTEKTT AQLEIEKNEQHDWSEMGNGKSQVAQGPGLIGLENLGNTCYLNSAVQVLASVPELAKYFVE NIESIATEVPEGTQPCGDVLLQFAKIVKALTTDRVVEQQRELLSRYRKACEEMGINYEEP EQLKNVAVKPSMLKYAIGRDNQRFATGDQQDAEEFFSHLLNTLVDMETEVKRRTKTNFKL KSFFFFKYRQYLVCESLNKMTYNDNEMHMLCLPLILQSETMELDPTVEINLQHCVSNWER EQEIDYIDQGKHHVGVITNALVTLPQYLVIKVDRFFYNMDGTSKKIVNPVVVPQEGIVLE TQGEVDHKGYIVECNTREPKKAKHQGNDTLLQQLMAMGFQEKLCRLAMEREGNDNIDTCV NWILSNMDVVSEDTPDDKAGVVATNASILMDLGYPLELANRAAEKFGDDLAAAVDWLATE DFAPTTQVKQKGRYKLWAVISHIGESINTGHYVCHITKHGHWYTYNDAKVLTCDSAPTNN GYLYLFSRLE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_IV004350.fa Sequence name : BBOV_IV004350 Sequence length : 790 VALUES OF COMPUTED PARAMETERS Coef20 : 3.511 CoefTot : -0.113 ChDiff : -43 ZoneTo : 2 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.188 1.606 0.136 0.603 MesoH : -0.461 0.359 -0.331 0.248 MuHd_075 : 16.843 10.662 5.331 4.073 MuHd_095 : 27.880 16.239 9.448 5.980 MuHd_100 : 30.287 15.895 9.408 5.717 MuHd_105 : 26.870 15.478 7.858 4.728 Hmax_075 : 0.467 2.333 -1.991 2.590 Hmax_095 : 7.900 9.100 0.393 3.690 Hmax_100 : 13.200 10.000 1.637 4.030 Hmax_105 : 12.800 9.600 1.358 3.370 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9530 0.0470 DFMC : 0.9465 0.0535
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 790 BBOV_IV004350 MKEAEPLAKLAQTSGLKTPSRSTAVHKDECIYSTDTDKSPDGIYINLKSFESFGKGVLHLDTSGDNAIYLHVKRVLVPVN 80 PEVNYSEDVTLDKVDSSTAINKEPGSTTNETAIVYKQKKTCDEVVEYEIYCPSLGLTVPLESAPQGLATICKAVIDHEAF 160 NFNPDEFVWKDYLNESKYAEHLIQVEAPPVIKYENLVCDRCGAATNLWLNLSDGYIGCGRKNYDSGGCADGEEGAAIQHY 240 NETGGIYPLAVKVGTITATSGDVFSYAADEDCLVTDPYLSVHLAHFGIDVSNLTKTEKTTAQLEIEKNEQHDWSEMGNGK 320 SQVAQGPGLIGLENLGNTCYLNSAVQVLASVPELAKYFVENIESIATEVPEGTQPCGDVLLQFAKIVKALTTDRVVEQQR 400 ELLSRYRKACEEMGINYEEPEQLKNVAVKPSMLKYAIGRDNQRFATGDQQDAEEFFSHLLNTLVDMETEVKRRTKTNFKL 480 KSFFFFKYRQYLVCESLNKMTYNDNEMHMLCLPLILQSETMELDPTVEINLQHCVSNWEREQEIDYIDQGKHHVGVITNA 560 LVTLPQYLVIKVDRFFYNMDGTSKKIVNPVVVPQEGIVLETQGEVDHKGYIVECNTREPKKAKHQGNDTLLQQLMAMGFQ 640 EKLCRLAMEREGNDNIDTCVNWILSNMDVVSEDTPDDKAGVVATNASILMDLGYPLELANRAAEKFGDDLAAAVDWLATE 720 DFAPTTQVKQKGRYKLWAVISHIGESINTGHYVCHITKHGHWYTYNDAKVLTCDSAPTNNGYLYLFSRLE 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ...................................................................... 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_IV004350 2 -----MK|EA 0.075 . BBOV_IV004350 9 EAEPLAK|LA 0.069 . BBOV_IV004350 17 AQTSGLK|TP 0.054 . BBOV_IV004350 21 GLKTPSR|ST 0.131 . BBOV_IV004350 27 RSTAVHK|DE 0.073 . BBOV_IV004350 38 YSTDTDK|SP 0.075 . BBOV_IV004350 48 GIYINLK|SF 0.087 . BBOV_IV004350 55 SFESFGK|GV 0.077 . BBOV_IV004350 73 AIYLHVK|RV 0.066 . BBOV_IV004350 74 IYLHVKR|VL 0.151 . BBOV_IV004350 93 EDVTLDK|VD 0.055 . BBOV_IV004350 102 SSTAINK|EP 0.062 . BBOV_IV004350 116 ETAIVYK|QK 0.070 . BBOV_IV004350 118 AIVYKQK|KT 0.080 . BBOV_IV004350 119 IVYKQKK|TC 0.123 . BBOV_IV004350 152 GLATICK|AV 0.107 . BBOV_IV004350 170 PDEFVWK|DY 0.068 . BBOV_IV004350 177 DYLNESK|YA 0.071 . BBOV_IV004350 192 EAPPVIK|YE 0.057 . BBOV_IV004350 200 ENLVCDR|CG 0.071 . BBOV_IV004350 220 GYIGCGR|KN 0.091 . BBOV_IV004350 221 YIGCGRK|NY 0.081 . BBOV_IV004350 252 IYPLAVK|VG 0.050 . BBOV_IV004350 295 DVSNLTK|TE 0.056 . BBOV_IV004350 298 NLTKTEK|TT 0.065 . BBOV_IV004350 307 AQLEIEK|NE 0.052 . BBOV_IV004350 320 SEMGNGK|SQ 0.090 . BBOV_IV004350 356 SVPELAK|YF 0.061 . BBOV_IV004350 385 VLLQFAK|IV 0.073 . BBOV_IV004350 388 QFAKIVK|AL 0.067 . BBOV_IV004350 394 KALTTDR|VV 0.132 . BBOV_IV004350 400 RVVEQQR|EL 0.070 . BBOV_IV004350 405 QRELLSR|YR 0.131 . BBOV_IV004350 407 ELLSRYR|KA 0.089 . BBOV_IV004350 408 LLSRYRK|AC 0.356 . BBOV_IV004350 424 EEPEQLK|NV 0.070 . BBOV_IV004350 429 LKNVAVK|PS 0.076 . BBOV_IV004350 434 VKPSMLK|YA 0.064 . BBOV_IV004350 439 LKYAIGR|DN 0.098 . BBOV_IV004350 443 IGRDNQR|FA 0.116 . BBOV_IV004350 471 DMETEVK|RR 0.052 . BBOV_IV004350 472 METEVKR|RT 0.158 . BBOV_IV004350 473 ETEVKRR|TK 0.103 . BBOV_IV004350 475 EVKRRTK|TN 0.120 . BBOV_IV004350 479 RTKTNFK|LK 0.058 . BBOV_IV004350 481 KTNFKLK|SF 0.081 . BBOV_IV004350 487 KSFFFFK|YR 0.064 . BBOV_IV004350 489 FFFFKYR|QY 0.087 . BBOV_IV004350 499 VCESLNK|MT 0.061 . BBOV_IV004350 540 CVSNWER|EQ 0.087 . BBOV_IV004350 551 DYIDQGK|HH 0.065 . BBOV_IV004350 571 PQYLVIK|VD 0.058 . BBOV_IV004350 574 LVIKVDR|FF 0.109 . BBOV_IV004350 584 NMDGTSK|KI 0.054 . BBOV_IV004350 585 MDGTSKK|IV 0.177 . BBOV_IV004350 608 QGEVDHK|GY 0.071 . BBOV_IV004350 617 IVECNTR|EP 0.084 . BBOV_IV004350 620 CNTREPK|KA 0.179 . BBOV_IV004350 621 NTREPKK|AK 0.172 . BBOV_IV004350 623 REPKKAK|HQ 0.077 . BBOV_IV004350 642 AMGFQEK|LC 0.060 . BBOV_IV004350 645 FQEKLCR|LA 0.092 . BBOV_IV004350 650 CRLAMER|EG 0.087 . BBOV_IV004350 678 EDTPDDK|AG 0.058 . BBOV_IV004350 701 PLELANR|AA 0.107 . BBOV_IV004350 705 ANRAAEK|FG 0.073 . BBOV_IV004350 729 APTTQVK|QK 0.070 . BBOV_IV004350 731 TTQVKQK|GR 0.079 . BBOV_IV004350 733 QVKQKGR|YK 0.115 . BBOV_IV004350 735 KQKGRYK|LW 0.064 . BBOV_IV004350 758 YVCHITK|HG 0.060 . BBOV_IV004350 769 YTYNDAK|VL 0.057 . BBOV_IV004350 788 YLYLFSR|LE 0.077 . ____________________________^_________________

  • Fasta :-

    >BBOV_IV004350 ATGAAGGAAGCTGAGCCACTCGCTAAGCTAGCTCAAACCAGTGGATTGAAGACACCGAGT CGTAGTACAGCAGTACACAAAGATGAATGTATATACAGCACTGATACCGATAAATCGCCA GACGGCATCTATATAAACCTGAAATCATTTGAATCATTTGGGAAAGGGGTCCTTCATCTT GATACATCTGGTGACAATGCGATTTATCTACATGTAAAGCGAGTTCTAGTCCCCGTCAAC CCAGAGGTTAATTACAGCGAGGACGTCACACTTGATAAGGTGGATAGTAGCACTGCGATT AACAAGGAGCCAGGAAGTACTACGAATGAAACAGCTATAGTGTACAAGCAAAAGAAGACA TGCGATGAAGTCGTGGAGTATGAGATATACTGCCCATCGCTAGGACTCACGGTGCCCCTA GAGAGTGCACCGCAGGGTCTAGCTACAATTTGCAAAGCCGTTATAGACCATGAAGCATTC AACTTTAACCCTGATGAGTTTGTTTGGAAGGACTATTTGAACGAGTCCAAGTATGCAGAG CATCTAATACAAGTAGAAGCACCACCGGTGATCAAGTACGAGAACTTGGTCTGCGACCGC TGTGGAGCTGCTACTAACCTATGGCTTAATTTATCTGATGGGTATATTGGCTGTGGTCGT AAAAACTATGACTCCGGAGGCTGCGCTGATGGAGAGGAAGGTGCTGCAATCCAGCATTAC AATGAAACGGGTGGTATATACCCACTGGCAGTGAAAGTGGGTACCATCACTGCCACTTCG GGTGATGTGTTCAGCTACGCAGCCGATGAGGACTGCTTGGTAACTGACCCTTACCTCAGT GTCCACCTAGCCCACTTTGGTATAGACGTCTCTAACTTGACCAAAACCGAGAAAACAACG GCACAATTGGAAATTGAGAAGAATGAACAGCATGATTGGTCCGAAATGGGCAATGGGAAG TCACAAGTGGCACAAGGACCGGGATTAATCGGTCTAGAGAACCTGGGGAATACATGCTAC CTCAATTCGGCAGTGCAGGTACTGGCATCAGTACCTGAACTAGCGAAGTACTTCGTGGAA AACATTGAAAGCATCGCAACTGAGGTGCCAGAAGGTACCCAACCGTGCGGTGATGTGTTG TTGCAATTTGCAAAGATAGTCAAGGCGTTGACCACGGATCGCGTGGTAGAGCAGCAACGT GAACTATTATCCAGATATCGCAAAGCTTGTGAAGAGATGGGAATTAATTACGAAGAACCG GAACAATTGAAAAACGTAGCTGTGAAGCCATCAATGTTAAAGTATGCCATTGGCAGGGAC AACCAGAGGTTTGCCACAGGTGACCAACAGGATGCAGAGGAATTCTTCAGCCACCTCCTG AATACGCTTGTTGATATGGAAACAGAAGTAAAACGACGTACAAAAACAAACTTTAAACTG AAGTCATTCTTTTTCTTCAAGTATAGGCAGTACCTGGTCTGCGAAAGCTTGAATAAGATG ACCTACAACGACAATGAGATGCATATGCTATGTCTACCGTTGATCCTACAATCCGAAACA ATGGAATTGGACCCTACAGTCGAAATTAACCTACAGCACTGCGTAAGCAACTGGGAGCGT GAACAGGAGATTGACTACATTGACCAGGGCAAACACCACGTAGGGGTGATCACTAACGCA CTAGTGACGTTACCACAGTACCTCGTGATAAAGGTCGACCGTTTCTTCTATAACATGGAT GGAACTAGTAAGAAAATAGTGAACCCCGTTGTGGTACCACAGGAGGGCATTGTACTAGAA ACACAAGGTGAAGTGGACCACAAAGGATATATCGTTGAATGCAATACACGCGAACCTAAA AAGGCCAAACATCAAGGAAATGACACATTGTTGCAACAGCTGATGGCCATGGGATTCCAG GAAAAGCTATGTAGATTGGCCATGGAAAGAGAAGGGAATGACAACATAGATACATGCGTG AACTGGATACTATCCAACATGGACGTAGTCTCAGAGGATACGCCAGACGACAAAGCTGGA GTAGTTGCCACCAACGCTTCGATACTGATGGACCTGGGATACCCACTGGAGCTGGCAAAC AGAGCTGCCGAGAAGTTTGGAGATGACCTGGCTGCCGCCGTGGACTGGCTGGCAACGGAG GATTTCGCCCCTACCACACAGGTGAAGCAAAAGGGAAGATACAAGCTCTGGGCAGTTATA TCGCATATAGGAGAAAGTATCAATACGGGGCATTACGTATGCCACATAACGAAACATGGG CACTGGTATACCTACAATGACGCCAAAGTGCTAACTTGTGACAGTGCACCAACCAATAAT GGGTACCTATACCTATTTAGTAGGTTGGAATAA
  • Download Fasta

  • Fasta :-

    MKEAEPLAKLAQTSGLKTPSRSTAVHKDECIYSTDTDKSPDGIYINLKSFESFGKGVLHL DTSGDNAIYLHVKRVLVPVNPEVNYSEDVTLDKVDSSTAINKEPGSTTNETAIVYKQKKT CDEVVEYEIYCPSLGLTVPLESAPQGLATICKAVIDHEAFNFNPDEFVWKDYLNESKYAE HLIQVEAPPVIKYENLVCDRCGAATNLWLNLSDGYIGCGRKNYDSGGCADGEEGAAIQHY NETGGIYPLAVKVGTITATSGDVFSYAADEDCLVTDPYLSVHLAHFGIDVSNLTKTEKTT AQLEIEKNEQHDWSEMGNGKSQVAQGPGLIGLENLGNTCYLNSAVQVLASVPELAKYFVE NIESIATEVPEGTQPCGDVLLQFAKIVKALTTDRVVEQQRELLSRYRKACEEMGINYEEP EQLKNVAVKPSMLKYAIGRDNQRFATGDQQDAEEFFSHLLNTLVDMETEVKRRTKTNFKL KSFFFFKYRQYLVCESLNKMTYNDNEMHMLCLPLILQSETMELDPTVEINLQHCVSNWER EQEIDYIDQGKHHVGVITNALVTLPQYLVIKVDRFFYNMDGTSKKIVNPVVVPQEGIVLE TQGEVDHKGYIVECNTREPKKAKHQGNDTLLQQLMAMGFQEKLCRLAMEREGNDNIDTCV NWILSNMDVVSEDTPDDKAGVVATNASILMDLGYPLELANRAAEKFGDDLAAAVDWLATE DFAPTTQVKQKGRYKLWAVISHIGESINTGHYVCHITKHGHWYTYNDAKVLTCDSAPTNN GYLYLFSRLE

    No Results
  • title: Active Site
  • coordinates: N334,C339,H751,D767
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
BBOV_IV00435039 SDTDKSPDGI0.992unspBBOV_IV004350674 TVSEDTPDDK0.991unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India