BBOV_IV004580 | 26S protease regulatory subunit 6A, putative

_IDPredictionOTHERSPmTPCS_Position
BBOV_IV004580OTHER0.9999650.0000170.000018
No Results

  • Fasta :-

    >BBOV_IV004580 MTDANEQIDLSEVSRMSDAEVRVRINMIDAEIKILRSEHTRLKSQQIAMQERIKDNLEKI QLNKQLPYLVSNVVELLDIEDDDDEEAGVQGVAMKSKGKSLVIKTSTRQTIFLPVIGLIP HTELHPGDLVGVNKDSYLVLDKLPPEYDNRVKAMEVCEKPIEDYSDIGGLDKQIQELIEA IVLPITHKDLFEKIGIKPPKGVLMHGPPGTGKTLLARACAAQTKATFVKLAGPQLVQMFI GDGAKMVRDAFSLAKEKSPTIIFIDEIDAIGTKRFDSELSGDREVQRTMLELLNQLDGFS SDDRVKVIAATNRPDTLDPALLRSGRLDRKIELPHPNEDARAHIMQIHSRKMNVHPDVNF KELARSTEDFNGAQLKAVCVEAGMVALRRGAKELDHNDFVEGIAVLSAKKKTTLNYLN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_IV004580.fa Sequence name : BBOV_IV004580 Sequence length : 418 VALUES OF COMPUTED PARAMETERS Coef20 : 3.641 CoefTot : 0.000 ChDiff : -9 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.818 1.035 -0.097 0.561 MesoH : -0.505 0.344 -0.391 0.224 MuHd_075 : 5.282 4.959 1.160 2.043 MuHd_095 : 19.097 11.535 3.498 4.152 MuHd_100 : 6.608 4.310 0.866 2.099 MuHd_105 : 17.632 7.267 4.669 2.690 Hmax_075 : -9.887 3.150 -3.227 1.330 Hmax_095 : -7.087 3.325 -3.800 1.732 Hmax_100 : -6.800 1.400 -3.467 0.970 Hmax_105 : -4.000 2.450 -2.981 1.190 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6626 0.3374 DFMC : 0.7724 0.2276
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 418 BBOV_IV004580 MTDANEQIDLSEVSRMSDAEVRVRINMIDAEIKILRSEHTRLKSQQIAMQERIKDNLEKIQLNKQLPYLVSNVVELLDIE 80 DDDDEEAGVQGVAMKSKGKSLVIKTSTRQTIFLPVIGLIPHTELHPGDLVGVNKDSYLVLDKLPPEYDNRVKAMEVCEKP 160 IEDYSDIGGLDKQIQELIEAIVLPITHKDLFEKIGIKPPKGVLMHGPPGTGKTLLARACAAQTKATFVKLAGPQLVQMFI 240 GDGAKMVRDAFSLAKEKSPTIIFIDEIDAIGTKRFDSELSGDREVQRTMLELLNQLDGFSSDDRVKVIAATNRPDTLDPA 320 LLRSGRLDRKIELPHPNEDARAHIMQIHSRKMNVHPDVNFKELARSTEDFNGAQLKAVCVEAGMVALRRGAKELDHNDFV 400 EGIAVLSAKKKTTLNYLN 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .................. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_IV004580 15 DLSEVSR|MS 0.140 . BBOV_IV004580 22 MSDAEVR|VR 0.078 . BBOV_IV004580 24 DAEVRVR|IN 0.075 . BBOV_IV004580 33 MIDAEIK|IL 0.060 . BBOV_IV004580 36 AEIKILR|SE 0.123 . BBOV_IV004580 41 LRSEHTR|LK 0.189 . BBOV_IV004580 43 SEHTRLK|SQ 0.080 . BBOV_IV004580 52 QIAMQER|IK 0.106 . BBOV_IV004580 54 AMQERIK|DN 0.066 . BBOV_IV004580 59 IKDNLEK|IQ 0.059 . BBOV_IV004580 64 EKIQLNK|QL 0.060 . BBOV_IV004580 95 VQGVAMK|SK 0.119 . BBOV_IV004580 97 GVAMKSK|GK 0.095 . BBOV_IV004580 99 AMKSKGK|SL 0.085 . BBOV_IV004580 104 GKSLVIK|TS 0.080 . BBOV_IV004580 108 VIKTSTR|QT 0.081 . BBOV_IV004580 134 DLVGVNK|DS 0.073 . BBOV_IV004580 142 SYLVLDK|LP 0.052 . BBOV_IV004580 150 PPEYDNR|VK 0.072 . BBOV_IV004580 152 EYDNRVK|AM 0.067 . BBOV_IV004580 159 AMEVCEK|PI 0.071 . BBOV_IV004580 172 DIGGLDK|QI 0.063 . BBOV_IV004580 188 VLPITHK|DL 0.073 . BBOV_IV004580 193 HKDLFEK|IG 0.062 . BBOV_IV004580 197 FEKIGIK|PP 0.061 . BBOV_IV004580 200 IGIKPPK|GV 0.100 . BBOV_IV004580 212 GPPGTGK|TL 0.059 . BBOV_IV004580 217 GKTLLAR|AC 0.099 . BBOV_IV004580 224 ACAAQTK|AT 0.081 . BBOV_IV004580 229 TKATFVK|LA 0.134 . BBOV_IV004580 245 FIGDGAK|MV 0.084 . BBOV_IV004580 248 DGAKMVR|DA 0.120 . BBOV_IV004580 255 DAFSLAK|EK 0.067 . BBOV_IV004580 257 FSLAKEK|SP 0.074 . BBOV_IV004580 273 IDAIGTK|RF 0.062 . BBOV_IV004580 274 DAIGTKR|FD 0.162 . BBOV_IV004580 283 SELSGDR|EV 0.080 . BBOV_IV004580 287 GDREVQR|TM 0.096 . BBOV_IV004580 304 GFSSDDR|VK 0.076 . BBOV_IV004580 306 SSDDRVK|VI 0.060 . BBOV_IV004580 313 VIAATNR|PD 0.077 . BBOV_IV004580 323 LDPALLR|SG 0.086 . BBOV_IV004580 326 ALLRSGR|LD 0.220 . BBOV_IV004580 329 RSGRLDR|KI 0.247 . BBOV_IV004580 330 SGRLDRK|IE 0.069 . BBOV_IV004580 341 HPNEDAR|AH 0.140 . BBOV_IV004580 350 IMQIHSR|KM 0.094 . BBOV_IV004580 351 MQIHSRK|MN 0.088 . BBOV_IV004580 361 HPDVNFK|EL 0.068 . BBOV_IV004580 365 NFKELAR|ST 0.143 . BBOV_IV004580 376 FNGAQLK|AV 0.098 . BBOV_IV004580 388 AGMVALR|RG 0.086 . BBOV_IV004580 389 GMVALRR|GA 0.177 . BBOV_IV004580 392 ALRRGAK|EL 0.195 . BBOV_IV004580 409 IAVLSAK|KK 0.065 . BBOV_IV004580 410 AVLSAKK|KT 0.067 . BBOV_IV004580 411 VLSAKKK|TT 0.148 . ____________________________^_________________

  • Fasta :-

    >BBOV_IV004580 ATGACGGATGCCAATGAGCAGATTGATCTCAGTGAGGTGTCACGAATGAGTGATGCCGAA GTGCGTGTTCGCATCAATATGATCGACGCTGAGATCAAGATTTTGCGTAGTGAACACACC CGTCTAAAGTCGCAGCAGATAGCTATGCAAGAGCGCATAAAGGATAATTTGGAGAAAATA CAGCTCAATAAGCAGCTTCCTTATTTGGTGTCCAATGTGGTAGAGTTGCTTGACATAGAG GATGATGACGACGAGGAGGCAGGAGTTCAGGGCGTTGCTATGAAGAGCAAGGGCAAATCC TTGGTTATCAAGACTTCCACTCGTCAGACTATTTTCCTTCCTGTCATTGGGTTGATTCCT CATACTGAACTTCACCCTGGTGATTTGGTTGGTGTGAATAAGGACAGTTATTTAGTGTTG GACAAGTTACCTCCTGAGTACGACAATCGTGTAAAGGCCATGGAGGTTTGCGAGAAGCCC ATCGAGGACTATTCTGATATCGGGGGTTTGGACAAACAGATCCAAGAACTTATTGAGGCT ATTGTCCTTCCCATCACTCACAAGGATCTTTTTGAAAAGATAGGCATTAAGCCGCCAAAG GGTGTTTTAATGCATGGGCCTCCTGGAACGGGAAAGACCCTTCTTGCACGTGCTTGCGCT GCCCAGACGAAGGCTACATTTGTGAAGTTGGCTGGACCTCAGCTGGTGCAGATGTTTATC GGTGACGGTGCTAAGATGGTCCGTGATGCTTTTAGTTTGGCTAAGGAGAAGTCGCCTACT ATTATTTTTATTGACGAAATCGATGCTATCGGTACTAAGCGTTTCGACAGTGAGCTTTCT GGTGACCGTGAGGTCCAGCGTACTATGCTGGAGCTATTAAATCAGCTGGATGGTTTCAGC AGTGACGATCGTGTAAAGGTCATTGCTGCTACTAATCGTCCAGATACCCTTGACCCTGCA CTTTTACGTTCTGGTCGTTTGGATCGCAAGATAGAGCTCCCGCATCCTAATGAGGATGCT AGAGCGCACATTATGCAGATTCATTCCCGTAAGATGAATGTGCATCCTGATGTGAACTTT AAAGAGCTTGCTCGCTCGACTGAAGATTTCAACGGTGCTCAGCTGAAGGCTGTATGTGTT GAGGCTGGCATGGTTGCCCTTCGACGGGGTGCGAAGGAGCTGGACCACAATGATTTTGTG GAGGGTATCGCAGTGTTAAGTGCCAAGAAGAAGACCACTTTGAACTATTTGAACTGA
  • Download Fasta

  • Fasta :-

    MTDANEQIDLSEVSRMSDAEVRVRINMIDAEIKILRSEHTRLKSQQIAMQERIKDNLEKI QLNKQLPYLVSNVVELLDIEDDDDEEAGVQGVAMKSKGKSLVIKTSTRQTIFLPVIGLIP HTELHPGDLVGVNKDSYLVLDKLPPEYDNRVKAMEVCEKPIEDYSDIGGLDKQIQELIEA IVLPITHKDLFEKIGIKPPKGVLMHGPPGTGKTLLARACAAQTKATFVKLAGPQLVQMFI GDGAKMVRDAFSLAKEKSPTIIFIDEIDAIGTKRFDSELSGDREVQRTMLELLNQLDGFS SDDRVKVIAATNRPDTLDPALLRSGRLDRKIELPHPNEDARAHIMQIHSRKMNVHPDVNF KELARSTEDFNGAQLKAVCVEAGMVALRRGAKELDHNDFVEGIAVLSAKKKTTLNYLN

  • title: ATP binding site
  • coordinates: P207,P208,G209,T210,G211,K212,T213,L214,D265,N312
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
BBOV_IV004580366 SELARSTEDF0.997unspBBOV_IV004580366 SELARSTEDF0.997unspBBOV_IV004580366 SELARSTEDF0.997unspBBOV_IV00458017 SVSRMSDAEV0.995unspBBOV_IV004580277 SKRFDSELSG0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India