BBOV_IV005590 | hypothetical protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0003677      

  • Computed_GO_Functions:  DNA binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

No Results
No Results

  • Fasta :-

    >BBOV_IV005590 MTSIQLFVSACRLYNISARLVISIEAVTNRISFSAEAFETTNGSWKSVDFSTMTYDGTKY DMLRTPKPLMPGAQVTCNERDECQHNNHLFVKRQNKLFIYKQQDELAIVTIVILRSQCAE RVILNPVLFPFEAAELKVRLMQQTERKKQKGNIKDYIYVLGCNSKGWISELTPKHVERYS PQRGKNINTWLIRTIELINHKLKGLPEIGLVSLLERAEQKWMQTRVNNDPFPQTKAKFKN HPTYILASQIGNNRVRKKDATPLGYVKGEEVYLLSDFEDIKSRSAWLKVNRRVLDDATPV TTRRMYHKSHRMHMNTNLYQFSQTEPIPQVSMVDGTIPTNEYDNVDVTGEKFVPERTIYI KSKKSGLIFKTARSLNLYYKKAFSEYQEVDTLKPEIDGIVIRRTDLSIFLRTYEELLLNE TKLEQEQKKESYRKLWRSAFKTMLSDPPSVAVQQHRKIRKVLGDSVTKFLNRLEHVT
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_IV005590.fa Sequence name : BBOV_IV005590 Sequence length : 477 VALUES OF COMPUTED PARAMETERS Coef20 : 5.013 CoefTot : 0.920 ChDiff : 22 ZoneTo : 24 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.365 1.471 -0.005 0.478 MesoH : -0.782 0.052 -0.422 0.086 MuHd_075 : 17.524 19.606 6.288 4.931 MuHd_095 : 28.837 13.334 6.145 6.512 MuHd_100 : 35.146 16.632 8.265 7.722 MuHd_105 : 39.295 22.144 9.931 9.305 Hmax_075 : 13.183 18.100 3.183 5.410 Hmax_095 : 14.613 18.500 4.109 5.766 Hmax_100 : 14.300 16.300 4.073 5.490 Hmax_105 : 16.683 19.717 3.687 5.997 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.3895 0.6105 DFMC : 0.6507 0.3493
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 477 BBOV_IV005590 MTSIQLFVSACRLYNISARLVISIEAVTNRISFSAEAFETTNGSWKSVDFSTMTYDGTKYDMLRTPKPLMPGAQVTCNER 80 DECQHNNHLFVKRQNKLFIYKQQDELAIVTIVILRSQCAERVILNPVLFPFEAAELKVRLMQQTERKKQKGNIKDYIYVL 160 GCNSKGWISELTPKHVERYSPQRGKNINTWLIRTIELINHKLKGLPEIGLVSLLERAEQKWMQTRVNNDPFPQTKAKFKN 240 HPTYILASQIGNNRVRKKDATPLGYVKGEEVYLLSDFEDIKSRSAWLKVNRRVLDDATPVTTRRMYHKSHRMHMNTNLYQ 320 FSQTEPIPQVSMVDGTIPTNEYDNVDVTGEKFVPERTIYIKSKKSGLIFKTARSLNLYYKKAFSEYQEVDTLKPEIDGIV 400 IRRTDLSIFLRTYEELLLNETKLEQEQKKESYRKLWRSAFKTMLSDPPSVAVQQHRKIRKVLGDSVTKFLNRLEHVT 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ............................................................................. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_IV005590 12 LFVSACR|LY 0.070 . BBOV_IV005590 19 LYNISAR|LV 0.162 . BBOV_IV005590 30 IEAVTNR|IS 0.112 . BBOV_IV005590 46 TTNGSWK|SV 0.204 . BBOV_IV005590 59 MTYDGTK|YD 0.058 . BBOV_IV005590 64 TKYDMLR|TP 0.086 . BBOV_IV005590 67 DMLRTPK|PL 0.123 . BBOV_IV005590 80 QVTCNER|DE 0.086 . BBOV_IV005590 92 NNHLFVK|RQ 0.063 . BBOV_IV005590 93 NHLFVKR|QN 0.131 . BBOV_IV005590 96 FVKRQNK|LF 0.126 . BBOV_IV005590 101 NKLFIYK|QQ 0.059 . BBOV_IV005590 115 VTIVILR|SQ 0.110 . BBOV_IV005590 121 RSQCAER|VI 0.074 . BBOV_IV005590 137 FEAAELK|VR 0.054 . BBOV_IV005590 139 AAELKVR|LM 0.083 . BBOV_IV005590 146 LMQQTER|KK 0.083 . BBOV_IV005590 147 MQQTERK|KQ 0.082 . BBOV_IV005590 148 QQTERKK|QK 0.102 . BBOV_IV005590 150 TERKKQK|GN 0.086 . BBOV_IV005590 154 KQKGNIK|DY 0.084 . BBOV_IV005590 165 VLGCNSK|GW 0.069 . BBOV_IV005590 174 ISELTPK|HV 0.087 . BBOV_IV005590 178 TPKHVER|YS 0.142 . BBOV_IV005590 183 ERYSPQR|GK 0.099 . BBOV_IV005590 185 YSPQRGK|NI 0.068 . BBOV_IV005590 193 INTWLIR|TI 0.096 . BBOV_IV005590 201 IELINHK|LK 0.058 . BBOV_IV005590 203 LINHKLK|GL 0.084 . BBOV_IV005590 216 LVSLLER|AE 0.093 . BBOV_IV005590 220 LERAEQK|WM 0.064 . BBOV_IV005590 225 QKWMQTR|VN 0.107 . BBOV_IV005590 235 DPFPQTK|AK 0.076 . BBOV_IV005590 237 FPQTKAK|FK 0.078 . BBOV_IV005590 239 QTKAKFK|NH 0.066 . BBOV_IV005590 254 SQIGNNR|VR 0.064 . BBOV_IV005590 256 IGNNRVR|KK 0.100 . BBOV_IV005590 257 GNNRVRK|KD 0.267 . BBOV_IV005590 258 NNRVRKK|DA 0.240 . BBOV_IV005590 267 TPLGYVK|GE 0.066 . BBOV_IV005590 281 SDFEDIK|SR 0.079 . BBOV_IV005590 283 FEDIKSR|SA 0.128 . BBOV_IV005590 288 SRSAWLK|VN 0.094 . BBOV_IV005590 291 AWLKVNR|RV 0.090 . BBOV_IV005590 292 WLKVNRR|VL 0.164 . BBOV_IV005590 303 ATPVTTR|RM 0.072 . BBOV_IV005590 304 TPVTTRR|MY 0.271 . BBOV_IV005590 308 TRRMYHK|SH 0.119 . BBOV_IV005590 311 MYHKSHR|MH 0.095 . BBOV_IV005590 351 VDVTGEK|FV 0.062 . BBOV_IV005590 356 EKFVPER|TI 0.087 . BBOV_IV005590 361 ERTIYIK|SK 0.081 . BBOV_IV005590 363 TIYIKSK|KS 0.098 . BBOV_IV005590 364 IYIKSKK|SG 0.112 . BBOV_IV005590 370 KSGLIFK|TA 0.066 . BBOV_IV005590 373 LIFKTAR|SL 0.122 . BBOV_IV005590 380 SLNLYYK|KA 0.075 . BBOV_IV005590 381 LNLYYKK|AF 0.110 . BBOV_IV005590 393 QEVDTLK|PE 0.067 . BBOV_IV005590 402 IDGIVIR|RT 0.094 . BBOV_IV005590 403 DGIVIRR|TD 0.095 . BBOV_IV005590 411 DLSIFLR|TY 0.104 . BBOV_IV005590 422 LLLNETK|LE 0.059 . BBOV_IV005590 428 KLEQEQK|KE 0.060 . BBOV_IV005590 429 LEQEQKK|ES 0.119 . BBOV_IV005590 433 QKKESYR|KL 0.100 . BBOV_IV005590 434 KKESYRK|LW 0.106 . BBOV_IV005590 437 SYRKLWR|SA 0.184 . BBOV_IV005590 441 LWRSAFK|TM 0.062 . BBOV_IV005590 456 VAVQQHR|KI 0.141 . BBOV_IV005590 457 AVQQHRK|IR 0.080 . BBOV_IV005590 459 QQHRKIR|KV 0.380 . BBOV_IV005590 460 QHRKIRK|VL 0.132 . BBOV_IV005590 468 LGDSVTK|FL 0.068 . BBOV_IV005590 472 VTKFLNR|LE 0.075 . ____________________________^_________________

  • Fasta :-

    >BBOV_IV005590 ATGACGTCGATACAGCTATTTGTTTCTGCATGTCGACTGTACAACATATCAGCTCGTCTT GTCATATCAATTGAAGCTGTCACAAACAGAATTAGTTTCTCAGCGGAAGCTTTCGAAACT ACAAATGGATCATGGAAATCTGTAGATTTCAGTACAATGACATATGACGGTACCAAATAC GATATGTTAAGGACCCCAAAGCCGTTAATGCCAGGGGCACAAGTAACGTGCAATGAACGT GATGAATGTCAGCACAACAACCATCTTTTTGTTAAACGACAAAACAAGTTATTCATATAC AAACAACAAGACGAACTTGCAATTGTCACGATTGTAATACTGCGTAGTCAATGCGCAGAA AGGGTAATACTCAATCCTGTACTTTTCCCCTTTGAGGCAGCTGAATTAAAGGTACGCCTA ATGCAGCAAACAGAAAGGAAAAAACAAAAGGGAAACATCAAGGATTATATATACGTACTA GGTTGTAATAGTAAAGGGTGGATTTCCGAGTTAACCCCTAAGCATGTGGAAAGGTATAGT CCACAGAGAGGGAAGAATATTAACACATGGCTAATTCGGACTATTGAGCTTATAAACCAT AAGTTAAAAGGGCTACCAGAAATTGGTTTAGTATCGTTACTTGAGCGCGCAGAACAGAAG TGGATGCAAACAAGGGTAAACAATGACCCTTTTCCGCAAACTAAGGCGAAATTTAAAAAC CATCCAACATACATACTTGCATCACAGATAGGCAATAATAGAGTTCGAAAAAAGGATGCT ACACCCTTGGGTTATGTAAAAGGAGAAGAAGTTTATCTTTTGAGTGATTTTGAGGATATT AAGTCACGTAGCGCATGGTTGAAAGTCAACAGGCGGGTGCTAGATGATGCCACACCTGTC ACTACGCGTAGAATGTACCATAAGAGCCATAGGATGCACATGAATACGAATCTATATCAA TTTAGTCAAACTGAACCTATTCCTCAGGTATCAATGGTCGATGGAACCATACCAACAAAC GAATATGACAACGTAGACGTCACAGGAGAAAAGTTCGTGCCAGAAAGAACTATCTACATA AAGTCGAAAAAATCCGGACTGATCTTTAAAACTGCTCGTTCTTTGAATCTGTATTATAAG AAGGCTTTTTCTGAATATCAGGAAGTTGACACTTTGAAGCCAGAAATAGATGGCATCGTG ATTCGCAGGACTGACTTAAGTATATTTTTACGTACATATGAAGAATTGCTTTTGAATGAA ACGAAATTAGAACAAGAACAAAAAAAGGAATCATATCGCAAGTTGTGGCGTAGCGCTTTC AAAACTATGCTTTCAGATCCTCCATCTGTAGCCGTCCAGCAGCATCGCAAAATTAGAAAA GTACTTGGTGATAGCGTTACCAAGTTCCTCAACAGACTAGAACATGTCACTTGA
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  • Fasta :-

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethod
BBOV_IV005590180 SVERYSPQRG0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India