BBOV_IV005790 | rhomboid-like peptidase, putative

  • Computed_GO_Component_IDs:  GO:0016021      

  • Computed_GO_Components:  integral component of membrane      

  • Computed_GO_Function_IDs:  GO:0004252      

  • Computed_GO_Functions:  serine-type endopeptidase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
BBOV_IV005790OTHER0.9999610.0000340.000005
No Results

  • Fasta :-

    >BBOV_IV005790 MPMYITINLPDGDKPEEDASCDTHKDEDDLGLENVVSRQRKYTVEFDKSLAMCVEQFNNL LNQRSCPVKVLRCANSAYNLGLSISRLDVLRRDYVSCSYCTSADHYPVNYFDNIFDEQTD SEQGADTSRTSESSTRGVNRYVAHADSPTTTSMQDIFLYPTQNIIKRFMDRRTVTKLVRS DAHYIEVEQSNTLSDYVVYMVGSRIEEQPLLRSIWENTQEVVAFLRNNLFPWFRIFRVSI LITFAQWTLFIVRLVYSHTHPDSTEEHDGILFGAFSGELLKKDFAIYRLISSTFFHNSGG HLIISTIMHFRFSSVLERIHGPCITLFVYFLCSIYGMLGTCWVNPEDLQANGFAGDWGVA GALLSRYFMFPYLIDREHQHLINVFVSLLCLLFAKTIAAVTKILLSTHLLSALAGFCLGT MINNRLIGRTWCGIPSLVVDFLCSFTLLVVPVGSIFALSLLETT
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_IV005790.fa Sequence name : BBOV_IV005790 Sequence length : 464 VALUES OF COMPUTED PARAMETERS Coef20 : 2.634 CoefTot : -0.675 ChDiff : -11 ZoneTo : 10 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.188 2.376 0.499 0.789 MesoH : 1.019 1.481 0.130 0.501 MuHd_075 : 18.119 7.127 4.624 2.105 MuHd_095 : 10.774 6.317 3.092 2.527 MuHd_100 : 15.459 7.456 4.230 2.990 MuHd_105 : 18.299 7.440 5.167 2.881 Hmax_075 : 0.117 3.617 -2.529 2.193 Hmax_095 : -3.400 1.500 -2.926 2.360 Hmax_100 : -2.900 1.200 -2.991 2.220 Hmax_105 : 5.100 3.100 -1.000 3.080 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9971 0.0029 DFMC : 0.9926 0.0074
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 464 BBOV_IV005790 MPMYITINLPDGDKPEEDASCDTHKDEDDLGLENVVSRQRKYTVEFDKSLAMCVEQFNNLLNQRSCPVKVLRCANSAYNL 80 GLSISRLDVLRRDYVSCSYCTSADHYPVNYFDNIFDEQTDSEQGADTSRTSESSTRGVNRYVAHADSPTTTSMQDIFLYP 160 TQNIIKRFMDRRTVTKLVRSDAHYIEVEQSNTLSDYVVYMVGSRIEEQPLLRSIWENTQEVVAFLRNNLFPWFRIFRVSI 240 LITFAQWTLFIVRLVYSHTHPDSTEEHDGILFGAFSGELLKKDFAIYRLISSTFFHNSGGHLIISTIMHFRFSSVLERIH 320 GPCITLFVYFLCSIYGMLGTCWVNPEDLQANGFAGDWGVAGALLSRYFMFPYLIDREHQHLINVFVSLLCLLFAKTIAAV 400 TKILLSTHLLSALAGFCLGTMINNRLIGRTWCGIPSLVVDFLCSFTLLVVPVGSIFALSLLETT 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................ 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_IV005790 14 NLPDGDK|PE 0.057 . BBOV_IV005790 25 ASCDTHK|DE 0.080 . BBOV_IV005790 38 LENVVSR|QR 0.082 . BBOV_IV005790 40 NVVSRQR|KY 0.075 . BBOV_IV005790 41 VVSRQRK|YT 0.338 . BBOV_IV005790 48 YTVEFDK|SL 0.086 . BBOV_IV005790 64 NNLLNQR|SC 0.086 . BBOV_IV005790 69 QRSCPVK|VL 0.077 . BBOV_IV005790 72 CPVKVLR|CA 0.114 . BBOV_IV005790 86 LGLSISR|LD 0.060 . BBOV_IV005790 91 SRLDVLR|RD 0.077 . BBOV_IV005790 92 RLDVLRR|DY 0.119 . BBOV_IV005790 129 QGADTSR|TS 0.094 . BBOV_IV005790 136 TSESSTR|GV 0.160 . BBOV_IV005790 140 STRGVNR|YV 0.169 . BBOV_IV005790 166 PTQNIIK|RF 0.059 . BBOV_IV005790 167 TQNIIKR|FM 0.265 . BBOV_IV005790 171 IKRFMDR|RT 0.103 . BBOV_IV005790 172 KRFMDRR|TV 0.280 . BBOV_IV005790 176 DRRTVTK|LV 0.080 . BBOV_IV005790 179 TVTKLVR|SD 0.116 . BBOV_IV005790 204 VYMVGSR|IE 0.071 . BBOV_IV005790 212 EEQPLLR|SI 0.116 . BBOV_IV005790 226 EVVAFLR|NN 0.061 . BBOV_IV005790 234 NLFPWFR|IF 0.083 . BBOV_IV005790 237 PWFRIFR|VS 0.165 . BBOV_IV005790 253 WTLFIVR|LV 0.085 . BBOV_IV005790 281 FSGELLK|KD 0.059 . BBOV_IV005790 282 SGELLKK|DF 0.116 . BBOV_IV005790 288 KDFAIYR|LI 0.097 . BBOV_IV005790 311 STIMHFR|FS 0.138 . BBOV_IV005790 318 FSSVLER|IH 0.124 . BBOV_IV005790 366 AGALLSR|YF 0.067 . BBOV_IV005790 376 FPYLIDR|EH 0.075 . BBOV_IV005790 395 LCLLFAK|TI 0.067 . BBOV_IV005790 402 TIAAVTK|IL 0.066 . BBOV_IV005790 425 GTMINNR|LI 0.096 . BBOV_IV005790 429 NNRLIGR|TW 0.096 . ____________________________^_________________

  • Fasta :-

    >BBOV_IV005790 ATGCCTATGTACATCACCATTAACCTTCCAGATGGCGATAAGCCAGAGGAAGATGCAAGC TGTGACACCCATAAGGATGAGGACGACCTTGGGTTGGAGAATGTAGTAAGTAGGCAACGA AAGTATACAGTAGAGTTTGATAAGTCATTGGCCATGTGTGTGGAACAGTTCAACAATCTA CTCAACCAAAGATCGTGTCCTGTCAAGGTACTCCGCTGTGCTAATAGCGCATACAACCTT GGACTGAGCATATCACGGCTTGATGTATTACGGAGGGATTACGTCAGTTGCAGCTACTGC ACAAGCGCTGATCATTACCCAGTGAATTATTTCGACAATATATTTGATGAACAAACTGAC AGTGAACAAGGTGCTGACACTTCGAGGACATCGGAAAGCTCTACTCGAGGTGTTAATCGC TATGTAGCACATGCTGATAGCCCAACTACAACGTCAATGCAGGATATTTTCTTATACCCT ACCCAGAATATAATCAAGCGGTTCATGGATCGCAGAACAGTCACCAAATTAGTACGATCT GATGCTCATTATATAGAAGTGGAGCAAAGTAACACTTTATCGGATTATGTAGTGTATATG GTCGGAAGCCGTATCGAGGAGCAACCATTACTCCGTAGTATATGGGAGAATACACAAGAA GTGGTTGCATTCTTAAGGAATAACCTTTTTCCATGGTTTCGTATATTCCGAGTATCGATA CTCATTACATTCGCACAGTGGACATTATTTATAGTTAGGCTGGTGTACTCCCATACTCAC CCTGACAGCACAGAGGAACATGATGGCATACTATTCGGCGCATTCAGCGGTGAGCTGCTC AAGAAGGATTTTGCAATATATCGGTTAATAAGCTCCACATTTTTCCATAATTCAGGAGGA CATCTTATTATTAGCACAATCATGCATTTTAGGTTCAGCTCGGTACTTGAACGCATTCAC GGGCCATGCATCACGCTGTTTGTCTATTTTCTGTGCTCAATCTACGGTATGCTGGGAACT TGCTGGGTCAACCCGGAGGACTTACAAGCTAATGGATTCGCAGGGGATTGGGGAGTGGCA GGTGCCTTATTAAGCCGATACTTCATGTTCCCTTATCTGATAGATCGAGAGCATCAGCAC CTAATCAACGTATTTGTCAGCCTTCTGTGTTTATTGTTCGCAAAGACAATAGCGGCAGTG ACCAAGATCTTACTCTCTACCCACCTGCTATCAGCATTGGCGGGTTTCTGTCTGGGCACT ATGATAAACAATCGACTTATAGGTAGGACTTGGTGTGGAATCCCCAGCCTTGTTGTCGAT TTTTTATGCTCATTTACGCTCCTCGTTGTGCCCGTGGGTTCGATATTTGCATTATCCCTA CTTGAGACGACGTGA
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  • Fasta :-

    MPMYITINLPDGDKPEEDASCDTHKDEDDLGLENVVSRQRKYTVEFDKSLAMCVEQFNNL LNQRSCPVKVLRCANSAYNLGLSISRLDVLRRDYVSCSYCTSADHYPVNYFDNIFDEQTD SEQGADTSRTSESSTRGVNRYVAHADSPTTTSMQDIFLYPTQNIIKRFMDRRTVTKLVRS DAHYIEVEQSNTLSDYVVYMVGSRIEEQPLLRSIWENTQEVVAFLRNNLFPWFRIFRVSI LITFAQWTLFIVRLVYSHTHPDSTEEHDGILFGAFSGELLKKDFAIYRLISSTFFHNSGG HLIISTIMHFRFSSVLERIHGPCITLFVYFLCSIYGMLGTCWVNPEDLQANGFAGDWGVA GALLSRYFMFPYLIDREHQHLINVFVSLLCLLFAKTIAAVTKILLSTHLLSALAGFCLGT MINNRLIGRTWCGIPSLVVDFLCSFTLLVVPVGSIFALSLLETT

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
BBOV_IV005790131 STSRTSESST0.998unspBBOV_IV005790263 STHPDSTEEH0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India