BBOV_IV006720 | conserved hypothetical protein

UniProt_ID: A7AR59

Computed_GO_Component_IDs:
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	_ID	Prediction	OTHER	SP	mTP	CS_Position
	BBOV_IV006720	OTHER	0.999998	0.000000	0.000002

No Results

Fasta :-
>BBOV_IV006720 MESNQKTTGNNNGSLTKSKQTTNEGSTKKATVCNIAANSASSTEIIERVMDSGRNSMMMR LNSRGSIVGERTKTPEATKKHDQQRSITRSIHINKVVHRGYDSILSSSSREFSPTEFDLV ERLKVVTLTKTPTMSNNSGTISISGSSETTSASYLLASREIKRDVQKPERRLPIRRGYSD DVHNMIKKRGNRLFKTQSHNSPRSSSSSDYGHVYLNIYDLEAVNRVVNVVAGTFGAGAYH AGVEIYGCEYNFGYTPQGVSGIVQSQPRYHAAHKYRRSIDLGKTMYTPKEVMEIVEMMKP LWLGTSYDILKKNCLNFADAFCKQLGVGAIPTWVMGLQNKINWTRDSLQSGAAKLKQFDE AVGISRAFGSLSRKLTGECTGENK
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_IV006720.fa Sequence name : BBOV_IV006720 Sequence length : 384 VALUES OF COMPUTED PARAMETERS Coef20 : 3.309 CoefTot : -1.559 ChDiff : 19 ZoneTo : 43 KR : 5 DE : 2 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.035 1.041 0.033 0.551 MesoH : -0.601 0.096 -0.388 0.183 MuHd_075 : 44.262 20.348 12.136 6.910 MuHd_095 : 23.784 12.706 7.682 3.705 MuHd_100 : 20.722 13.065 6.678 3.335 MuHd_105 : 22.553 13.668 7.290 3.367 Hmax_075 : 10.500 9.800 1.380 2.840 Hmax_095 : 2.000 -1.575 -1.645 0.096 Hmax_100 : 0.700 5.200 -0.594 0.490 Hmax_105 : 2.800 10.383 3.214 -0.012 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8880 0.1120 DFMC : 0.7493 0.2507

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 384 BBOV_IV006720 MESNQKTTGNNNGSLTKSKQTTNEGSTKKATVCNIAANSASSTEIIERVMDSGRNSMMMRLNSRGSIVGERTKTPEATKK 80 HDQQRSITRSIHINKVVHRGYDSILSSSSREFSPTEFDLVERLKVVTLTKTPTMSNNSGTISISGSSETTSASYLLASRE 160 IKRDVQKPERRLPIRRGYSDDVHNMIKKRGNRLFKTQSHNSPRSSSSSDYGHVYLNIYDLEAVNRVVNVVAGTFGAGAYH 240 AGVEIYGCEYNFGYTPQGVSGIVQSQPRYHAAHKYRRSIDLGKTMYTPKEVMEIVEMMKPLWLGTSYDILKKNCLNFADA 320 FCKQLGVGAIPTWVMGLQNKINWTRDSLQSGAAKLKQFDEAVGISRAFGSLSRKLTGECTGENK 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................ 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_IV006720 6 -MESNQK|TT 0.063 . BBOV_IV006720 17 NNGSLTK|SK 0.077 . BBOV_IV006720 19 GSLTKSK|QT 0.081 . BBOV_IV006720 28 TNEGSTK|KA 0.076 . BBOV_IV006720 29 NEGSTKK|AT 0.096 . BBOV_IV006720 48 STEIIER|VM 0.094 . BBOV_IV006720 54 RVMDSGR|NS 0.096 . BBOV_IV006720 60 RNSMMMR|LN 0.124 . BBOV_IV006720 64 MMRLNSR|GS 0.122 . BBOV_IV006720 71 GSIVGER|TK 0.080 . BBOV_IV006720 73 IVGERTK|TP 0.061 . BBOV_IV006720 79 KTPEATK|KH 0.062 . BBOV_IV006720 80 TPEATKK|HD 0.109 . BBOV_IV006720 85 KKHDQQR|SI 0.290 . BBOV_IV006720 89 QQRSITR|SI 0.155 . BBOV_IV006720 95 RSIHINK|VV 0.098 . BBOV_IV006720 99 INKVVHR|GY 0.161 . BBOV_IV006720 110 ILSSSSR|EF 0.147 . BBOV_IV006720 122 EFDLVER|LK 0.066 . BBOV_IV006720 124 DLVERLK|VV 0.061 . BBOV_IV006720 130 KVVTLTK|TP 0.058 . BBOV_IV006720 159 SYLLASR|EI 0.065 . BBOV_IV006720 162 LASREIK|RD 0.120 . BBOV_IV006720 163 ASREIKR|DV 0.427 . BBOV_IV006720 167 IKRDVQK|PE 0.062 . BBOV_IV006720 170 DVQKPER|RL 0.072 . BBOV_IV006720 171 VQKPERR|LP 0.096 . BBOV_IV006720 175 ERRLPIR|RG 0.081 . BBOV_IV006720 176 RRLPIRR|GY 0.215 . BBOV_IV006720 187 DVHNMIK|KR 0.062 . BBOV_IV006720 188 VHNMIKK|RG 0.090 . BBOV_IV006720 189 HNMIKKR|GN 0.222 . BBOV_IV006720 192 IKKRGNR|LF 0.236 . BBOV_IV006720 195 RGNRLFK|TQ 0.157 . BBOV_IV006720 203 QSHNSPR|SS 0.248 . BBOV_IV006720 225 DLEAVNR|VV 0.124 . BBOV_IV006720 268 IVQSQPR|YH 0.091 . BBOV_IV006720 274 RYHAAHK|YR 0.067 . BBOV_IV006720 276 HAAHKYR|RS 0.157 . BBOV_IV006720 277 AAHKYRR|SI 0.430 . BBOV_IV006720 283 RSIDLGK|TM 0.062 . BBOV_IV006720 289 KTMYTPK|EV 0.098 . BBOV_IV006720 299 EIVEMMK|PL 0.060 . BBOV_IV006720 311 TSYDILK|KN 0.060 . BBOV_IV006720 312 SYDILKK|NC 0.071 . BBOV_IV006720 323 FADAFCK|QL 0.073 . BBOV_IV006720 340 VMGLQNK|IN 0.059 . BBOV_IV006720 345 NKINWTR|DS 0.122 . BBOV_IV006720 354 LQSGAAK|LK 0.067 . BBOV_IV006720 356 SGAAKLK|QF 0.077 . BBOV_IV006720 366 EAVGISR|AF 0.080 . BBOV_IV006720 373 AFGSLSR|KL 0.077 . BBOV_IV006720 374 FGSLSRK|LT 0.103 . BBOV_IV006720 384 ECTGENK|-- 0.059 . ____________________________^_________________

Fasta :-
>BBOV_IV006720 ATGGAATCGAATCAAAAAACGACAGGCAACAACAACGGCTCCCTGACAAAGTCAAAACAG ACCACGAATGAAGGGAGTACAAAGAAGGCAACAGTTTGTAACATTGCGGCCAACTCTGCA AGCTCGACAGAAATAATCGAACGTGTAATGGACAGCGGTAGGAACAGCATGATGATGAGA TTAAACAGCCGTGGAAGTATAGTTGGAGAAAGGACAAAAACTCCAGAAGCAACGAAAAAA CATGATCAACAAAGATCAATAACACGCTCAATTCACATCAACAAAGTTGTACACCGAGGA TATGACAGCATTCTCTCGTCGTCAAGTAGGGAGTTTTCACCAACAGAATTCGATCTTGTA GAGAGACTTAAGGTGGTTACCCTAACTAAAACGCCGACCATGTCAAACAACTCAGGAACT ATATCCATATCGGGGTCATCCGAAACAACTTCTGCGTCCTATCTGCTGGCATCAAGAGAA ATAAAACGAGATGTACAGAAACCAGAAAGAAGGTTGCCGATTCGTAGAGGTTACAGTGAT GATGTACATAACATGATCAAAAAAAGAGGAAATAGATTGTTCAAGACACAAAGCCACAAC AGTCCCAGATCAAGCAGCAGCTCCGACTATGGCCATGTATACCTCAATATATACGATCTA GAGGCAGTAAACAGAGTTGTAAATGTTGTAGCAGGCACTTTTGGAGCCGGAGCATATCAC GCAGGGGTGGAAATATACGGCTGTGAATATAACTTCGGATATACACCTCAGGGAGTATCA GGCATTGTCCAATCGCAGCCGAGATATCATGCAGCGCATAAATATCGCAGGAGCATAGAT CTAGGAAAGACAATGTATACACCAAAAGAAGTAATGGAAATAGTCGAAATGATGAAGCCA CTCTGGTTGGGAACTTCATACGATATTCTCAAAAAGAATTGTCTCAATTTCGCTGATGCG TTTTGTAAACAACTTGGAGTTGGTGCGATTCCCACCTGGGTTATGGGACTACAAAACAAA ATCAACTGGACACGAGACAGCCTACAGAGCGGTGCAGCCAAACTTAAGCAATTCGACGAA GCTGTTGGTATTAGCCGGGCCTTTGGGTCATTGTCAAGAAAACTAACCGGTGAATGTACC GGAGAAAATAAATAA
Download Fasta

Fasta :-

MESNQKTTGNNNGSLTKSKQTTNEGSTKKATVCNIAANSASSTEIIERVMDSGRNSMMMR LNSRGSIVGERTKTPEATKKHDQQRSITRSIHINKVVHRGYDSILSSSSREFSPTEFDLV ERLKVVTLTKTPTMSNNSGTISISGSSETTSASYLLASREIKRDVQKPERRLPIRRGYSD DVHNMIKKRGNRLFKTQSHNSPRSSSSSDYGHVYLNIYDLEAVNRVVNVVAGTFGAGAYH AGVEIYGCEYNFGYTPQGVSGIVQSQPRYHAAHKYRRSIDLGKTMYTPKEVMEIVEMMKP LWLGTSYDILKKNCLNFADAFCKQLGVGAIPTWVMGLQNKINWTRDSLQSGAAKLKQFDE AVGISRAFGSLSRKLTGECTGENK

No Results

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	BBOV_IV006720	109 S	LSSSSREFS	0.995	unsp	BBOV_IV006720	109 S	LSSSSREFS	0.995	unsp	BBOV_IV006720	109 S	LSSSSREFS	0.995	unsp	BBOV_IV006720	113 S	SREFSPTEF	0.998	unsp	BBOV_IV006720	201 S	QSHNSPRSS	0.996	unsp	BBOV_IV006720	206 S	PRSSSSSDY	0.997	unsp	BBOV_IV006720	208 S	SSSSSDYGH	0.995	unsp	BBOV_IV006720	42 S	NSASSTEII	0.992	unsp	BBOV_IV006720	108 S	ILSSSSREF	0.992	unsp

BBOV_IV006720 | conserved hypothetical protein

ID's

UniProt_ID: A7AR59

GEO Functions

Computed_GO_Component_IDs:

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Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

Literature

PubMed

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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India