BBOV_IV007650 | conserved hypothetical protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0003860      

  • Computed_GO_Functions:  3-hydroxyisobutyryl-CoA hydrolase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
BBOV_IV007650OTHER0.9814920.0012370.017271
No Results

  • Fasta :-

    >BBOV_IV007650 MISLYTGISQINSLYRKLADLETNIYKRFVVVTSMTRHIFSNGLHPIEQKLFSESLRKLK HHEKGQPLFKVVLRSIDDYLNNICDLSYLIQSYKKPLLAYANGVTGGYGSCLISLANTSA CYKHSKFKFNNIDNGVPLLGGQSYLLAMLRGSLGEYLLLTGKVLSGEDLVWSGLVRRFIP PDAIGLIQLTAERLVELPEKETEIQLQELYSPIETPYSLERFEWLIHEHFNRPSVKDILH SLERGISEKKLRSQSNLKSDVVRNWEMETMDIIMDRKSSELMDLDTSLKLIRDVKAYKVE VLKSLDITPKRWEEIKRFIYKPPLEKNDMYAFELLRNVQCEVLLESLQLELESFFTMLGK SLGLPDYNIWPESRFSVHPFTPSYRSGVALSSLPYLRKLHPDYDANTDSDHDAIRTDRLH ERWPPDFLQREMMLMKRILIK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_IV007650.fa Sequence name : BBOV_IV007650 Sequence length : 441 VALUES OF COMPUTED PARAMETERS Coef20 : 4.139 CoefTot : 0.012 ChDiff : 1 ZoneTo : 19 KR : 2 DE : 0 CleavSite : 26 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.112 1.076 0.232 0.515 MesoH : -0.124 0.474 -0.247 0.272 MuHd_075 : 21.410 12.404 4.987 4.250 MuHd_095 : 22.805 16.217 6.207 6.192 MuHd_100 : 22.812 19.642 6.603 7.221 MuHd_105 : 25.982 24.723 7.022 8.926 Hmax_075 : 14.300 16.100 2.869 4.960 Hmax_095 : 12.512 13.912 2.721 5.408 Hmax_100 : 15.500 18.700 3.585 6.840 Hmax_105 : 19.000 21.900 4.107 7.220 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.2075 0.7925 DFMC : 0.3856 0.6144 This protein is probably imported in chloroplast. f(Ser) = 0.1579 f(Arg) = 0.0526 CMi = 1.09890 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 441 BBOV_IV007650 MISLYTGISQINSLYRKLADLETNIYKRFVVVTSMTRHIFSNGLHPIEQKLFSESLRKLKHHEKGQPLFKVVLRSIDDYL 80 NNICDLSYLIQSYKKPLLAYANGVTGGYGSCLISLANTSACYKHSKFKFNNIDNGVPLLGGQSYLLAMLRGSLGEYLLLT 160 GKVLSGEDLVWSGLVRRFIPPDAIGLIQLTAERLVELPEKETEIQLQELYSPIETPYSLERFEWLIHEHFNRPSVKDILH 240 SLERGISEKKLRSQSNLKSDVVRNWEMETMDIIMDRKSSELMDLDTSLKLIRDVKAYKVEVLKSLDITPKRWEEIKRFIY 320 KPPLEKNDMYAFELLRNVQCEVLLESLQLELESFFTMLGKSLGLPDYNIWPESRFSVHPFTPSYRSGVALSSLPYLRKLH 400 PDYDANTDSDHDAIRTDRLHERWPPDFLQREMMLMKRILIK 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ......................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_IV007650 16 QINSLYR|KL 0.111 . BBOV_IV007650 17 INSLYRK|LA 0.104 . BBOV_IV007650 27 LETNIYK|RF 0.059 . BBOV_IV007650 28 ETNIYKR|FV 0.246 . BBOV_IV007650 37 VVTSMTR|HI 0.076 . BBOV_IV007650 50 LHPIEQK|LF 0.066 . BBOV_IV007650 57 LFSESLR|KL 0.128 . BBOV_IV007650 58 FSESLRK|LK 0.075 . BBOV_IV007650 60 ESLRKLK|HH 0.187 . BBOV_IV007650 64 KLKHHEK|GQ 0.060 . BBOV_IV007650 70 KGQPLFK|VV 0.073 . BBOV_IV007650 74 LFKVVLR|SI 0.225 . BBOV_IV007650 94 YLIQSYK|KP 0.056 . BBOV_IV007650 95 LIQSYKK|PL 0.092 . BBOV_IV007650 123 NTSACYK|HS 0.068 . BBOV_IV007650 126 ACYKHSK|FK 0.080 . BBOV_IV007650 128 YKHSKFK|FN 0.079 . BBOV_IV007650 150 YLLAMLR|GS 0.070 . BBOV_IV007650 162 YLLLTGK|VL 0.057 . BBOV_IV007650 176 VWSGLVR|RF 0.078 . BBOV_IV007650 177 WSGLVRR|FI 0.153 . BBOV_IV007650 193 IQLTAER|LV 0.088 . BBOV_IV007650 200 LVELPEK|ET 0.071 . BBOV_IV007650 221 TPYSLER|FE 0.104 . BBOV_IV007650 232 IHEHFNR|PS 0.091 . BBOV_IV007650 236 FNRPSVK|DI 0.097 . BBOV_IV007650 244 ILHSLER|GI 0.108 . BBOV_IV007650 249 ERGISEK|KL 0.072 . BBOV_IV007650 250 RGISEKK|LR 0.082 . BBOV_IV007650 252 ISEKKLR|SQ 0.157 . BBOV_IV007650 258 RSQSNLK|SD 0.067 . BBOV_IV007650 263 LKSDVVR|NW 0.168 . BBOV_IV007650 276 MDIIMDR|KS 0.095 . BBOV_IV007650 277 DIIMDRK|SS 0.091 . BBOV_IV007650 289 DLDTSLK|LI 0.059 . BBOV_IV007650 292 TSLKLIR|DV 0.158 . BBOV_IV007650 295 KLIRDVK|AY 0.103 . BBOV_IV007650 298 RDVKAYK|VE 0.054 . BBOV_IV007650 303 YKVEVLK|SL 0.079 . BBOV_IV007650 310 SLDITPK|RW 0.069 . BBOV_IV007650 311 LDITPKR|WE 0.184 . BBOV_IV007650 316 KRWEEIK|RF 0.066 . BBOV_IV007650 317 RWEEIKR|FI 0.215 . BBOV_IV007650 321 IKRFIYK|PP 0.071 . BBOV_IV007650 326 YKPPLEK|ND 0.056 . BBOV_IV007650 336 YAFELLR|NV 0.081 . BBOV_IV007650 360 FFTMLGK|SL 0.074 . BBOV_IV007650 374 NIWPESR|FS 0.080 . BBOV_IV007650 385 PFTPSYR|SG 0.085 . BBOV_IV007650 397 SSLPYLR|KL 0.085 . BBOV_IV007650 398 SLPYLRK|LH 0.070 . BBOV_IV007650 415 SDHDAIR|TD 0.102 . BBOV_IV007650 418 DAIRTDR|LH 0.192 . BBOV_IV007650 422 TDRLHER|WP 0.106 . BBOV_IV007650 430 PPDFLQR|EM 0.078 . BBOV_IV007650 436 REMMLMK|RI 0.064 . BBOV_IV007650 437 EMMLMKR|IL 0.168 . BBOV_IV007650 441 MKRILIK|-- 0.077 . ____________________________^_________________

  • Fasta :-

    >BBOV_IV007650 ATGATCAGCCTATACACCGGAATATCGCAAATAAACTCCTTATATCGCAAATTGGCAGAC CTTGAGACAAACATATACAAACGATTTGTCGTTGTCACCAGCATGACCAGGCATATATTC AGCAATGGACTACATCCAATAGAACAGAAGCTCTTTTCCGAATCCTTGCGAAAGTTGAAA CATCATGAAAAAGGCCAACCATTGTTTAAAGTTGTTTTACGATCAATTGATGACTACCTT AATAATATATGTGACTTGTCATATCTAATACAAAGCTACAAGAAGCCCCTGCTTGCTTAT GCCAACGGGGTAACAGGTGGTTATGGATCATGTTTAATTTCACTGGCAAATACCAGCGCC TGCTACAAACATTCGAAATTCAAATTCAACAATATAGATAACGGTGTGCCCCTTTTAGGA GGTCAATCTTATTTACTTGCTATGCTACGTGGATCACTTGGGGAATACCTGTTGTTGACG GGGAAGGTGCTCTCCGGAGAAGATCTAGTATGGTCAGGATTGGTGAGACGATTTATTCCA CCAGATGCAATAGGTCTCATCCAACTAACAGCTGAGAGACTTGTGGAATTACCTGAAAAG GAAACTGAAATCCAGCTACAAGAACTATATTCTCCAATAGAAACACCATATTCACTAGAA AGGTTTGAGTGGCTAATACACGAACATTTCAATCGACCATCAGTGAAGGATATACTACAC AGCCTTGAACGTGGGATATCCGAAAAAAAATTGAGGTCACAAAGTAATCTTAAAAGTGAT GTTGTTAGAAATTGGGAGATGGAAACTATGGATATTATCATGGACCGAAAATCATCGGAA TTGATGGACTTAGATACATCATTAAAGCTGATTAGGGACGTCAAGGCCTATAAGGTGGAG GTGCTTAAGTCGCTAGATATCACACCAAAGCGGTGGGAAGAAATTAAAAGGTTTATTTAC AAGCCTCCATTGGAAAAAAACGACATGTATGCATTTGAGTTGCTCAGGAACGTACAATGT GAAGTTTTACTGGAGTCATTACAACTGGAACTTGAGTCGTTCTTCACAATGTTAGGGAAG TCTCTGGGTCTACCAGACTATAATATTTGGCCAGAATCAAGGTTCTCGGTCCACCCATTC ACACCATCATATCGATCAGGAGTTGCCTTGTCATCCCTCCCGTATTTACGCAAACTTCAC CCGGACTATGATGCCAATACAGACAGTGATCATGATGCCATTCGAACTGATAGACTACAT GAACGCTGGCCCCCTGATTTTCTACAGCGGGAGATGATGCTCATGAAACGGATACTAATA AAATAG
  • Download Fasta

  • Fasta :-

    MISLYTGISQINSLYRKLADLETNIYKRFVVVTSMTRHIFSNGLHPIEQKLFSESLRKLK HHEKGQPLFKVVLRSIDDYLNNICDLSYLIQSYKKPLLAYANGVTGGYGSCLISLANTSA CYKHSKFKFNNIDNGVPLLGGQSYLLAMLRGSLGEYLLLTGKVLSGEDLVWSGLVRRFIP PDAIGLIQLTAERLVELPEKETEIQLQELYSPIETPYSLERFEWLIHEHFNRPSVKDILH SLERGISEKKLRSQSNLKSDVVRNWEMETMDIIMDRKSSELMDLDTSLKLIRDVKAYKVE VLKSLDITPKRWEEIKRFIYKPPLEKNDMYAFELLRNVQCEVLLESLQLELESFFTMLGK SLGLPDYNIWPESRFSVHPFTPSYRSGVALSSLPYLRKLHPDYDANTDSDHDAIRTDRLH ERWPPDFLQREMMLMKRILIK

  • title: substrate binding site
  • coordinates: R37,N42,G43,L44,H45,L56,V104,G106,G107,G109,N130,N131,N134
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
BBOV_IV007650218 SETPYSLERF0.993unspBBOV_IV007650218 SETPYSLERF0.993unspBBOV_IV007650218 SETPYSLERF0.993unspBBOV_IV007650234 SFNRPSVKDI0.996unspBBOV_IV007650247 SERGISEKKL0.993unspBBOV_IV007650278 SMDRKSSELM0.996unspBBOV_IV007650165 SGKVLSGEDL0.997unspBBOV_IV007650211 SQELYSPIET0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India