BBOV_IV010700 | ubiquitin-conjugating enzyme, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005515      

  • Computed_GO_Functions:  protein binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

No Results
No Results

  • Fasta :-

    >BBOV_IV010700 MYRQNLRLERELNDIQKELDGPVDAHTVENNIFKWKGYIKGPIQTPYEGGLFILNIDIPD DYPYNPPKIRFETKIWHPNISSETGAICLDILKNEWSPALTLRTALLSIQALMSTPEPDD PQDAEVATMYQRNYDEFERTAKLWTATFAQNRGETREGKLNTLLEIGIDKGKAIQALESC GWDTTVAINRIIDGDGV
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_IV010700.fa Sequence name : BBOV_IV010700 Sequence length : 197 VALUES OF COMPUTED PARAMETERS Coef20 : 3.552 CoefTot : 0.068 ChDiff : -10 ZoneTo : 8 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.806 1.124 -0.002 0.420 MesoH : -0.862 -0.005 -0.475 0.172 MuHd_075 : 21.408 12.485 5.757 3.850 MuHd_095 : 42.784 17.370 8.345 7.461 MuHd_100 : 50.731 22.265 10.482 10.266 MuHd_105 : 47.943 23.423 10.793 11.208 Hmax_075 : -18.667 -1.517 -6.195 -1.027 Hmax_095 : -0.900 3.500 -3.263 1.800 Hmax_100 : -0.900 3.500 -3.263 1.910 Hmax_105 : -1.600 5.700 -2.463 2.980 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7864 0.2136 DFMC : 0.7779 0.2221
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 197 BBOV_IV010700 MYRQNLRLERELNDIQKELDGPVDAHTVENNIFKWKGYIKGPIQTPYEGGLFILNIDIPDDYPYNPPKIRFETKIWHPNI 80 SSETGAICLDILKNEWSPALTLRTALLSIQALMSTPEPDDPQDAEVATMYQRNYDEFERTAKLWTATFAQNRGETREGKL 160 NTLLEIGIDKGKAIQALESCGWDTTVAINRIIDGDGV 240 ................................................................................ 80 ................................................................................ 160 ..................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ BBOV_IV010700 3 ----MYR|QN 0.088 . BBOV_IV010700 7 MYRQNLR|LE 0.069 . BBOV_IV010700 10 QNLRLER|EL 0.257 . BBOV_IV010700 17 ELNDIQK|EL 0.070 . BBOV_IV010700 34 VENNIFK|WK 0.075 . BBOV_IV010700 36 NNIFKWK|GY 0.089 . BBOV_IV010700 40 KWKGYIK|GP 0.062 . BBOV_IV010700 68 YPYNPPK|IR 0.066 . BBOV_IV010700 70 YNPPKIR|FE 0.107 . BBOV_IV010700 74 KIRFETK|IW 0.089 . BBOV_IV010700 93 ICLDILK|NE 0.050 . BBOV_IV010700 103 SPALTLR|TA 0.114 . BBOV_IV010700 132 VATMYQR|NY 0.090 . BBOV_IV010700 139 NYDEFER|TA 0.076 . BBOV_IV010700 142 EFERTAK|LW 0.126 . BBOV_IV010700 152 ATFAQNR|GE 0.086 . BBOV_IV010700 156 QNRGETR|EG 0.073 . BBOV_IV010700 159 GETREGK|LN 0.102 . BBOV_IV010700 170 LEIGIDK|GK 0.059 . BBOV_IV010700 172 IGIDKGK|AI 0.075 . BBOV_IV010700 190 TTVAINR|II 0.104 . ____________________________^_________________

  • Fasta :-

    >BBOV_IV010700 ATGTATCGACAAAATTTGAGGTTGGAGCGGGAGTTAAACGATATACAAAAGGAACTTGAT GGACCTGTGGATGCCCACACTGTTGAGAACAACATTTTTAAGTGGAAAGGCTATATTAAA GGTCCTATACAGACACCTTATGAAGGTGGTCTATTCATTCTCAATATTGATATACCTGAT GACTATCCATATAACCCCCCTAAAATCCGTTTCGAGACCAAAATTTGGCATCCTAATATA AGCAGCGAAACTGGAGCGATCTGTTTAGATATCTTAAAAAATGAATGGAGTCCAGCGTTG ACCCTTCGTACAGCACTACTTTCAATTCAAGCTTTAATGTCTACACCGGAACCAGATGAC CCTCAAGATGCGGAGGTAGCTACTATGTATCAAAGGAATTATGATGAATTCGAACGGACG GCGAAGCTGTGGACGGCAACATTTGCACAAAATCGAGGAGAAACAAGAGAAGGGAAACTG AATACCCTACTAGAAATAGGAATAGATAAGGGAAAAGCGATTCAGGCATTAGAAAGCTGC GGATGGGATACTACCGTTGCAATAAACCGAATTATCGATGGCGATGGTGTCTAA
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  • Fasta :-

    No Results
  • title: active site cysteine
  • coordinates: C88
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
BBOV_IV01070045 TGPIQTPYEG0.992unspBBOV_IV010700114 SQALMSTPEP0.99unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India