BBOV_IV011230 | apical membrane antigen 1

  • Computed_GO_Component_IDs:  GO:0016020      

  • Computed_GO_Components:  membrane      

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:  GO:0009405      

  • Computed_GO_Processes:  pathogenesis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

No Results
No Results

  • Fasta :-

    >BBOV_IV011230 MQLHYKMQSTSPKYNYKRMLCMVFVPVILSSFFAEDALASNSTLFAFHREPTNRRLTRRA SRGQLLNSRRGSDDTSESSDRYSGRSGGSKNSGQSPWIKYMQKFDIPRNHGSGIYVDLGG YESVGSKSYRMPVGKCPVVGKIIDLGNGADFLDPISSEDPSYRGLAFPETAVDSNIPTQP KTRGSSSVTAAKLSPVSAKDLRRWGYEGNDVANCSEYASNLIPASDKTTKYRYPFVFDSD NQMCYILYSAIQYNQGNRYCDNDGSSEEGTSSLLCMKPYKSAEDAHLYYGSAKVDPDWEE NCPMHPVRDAIFGKWSGGSCVAIAPAFQEYANSTEDCAAILFDNSATDLDIEVVNEEFNE LKELTSGLKRLNLSKVANAIFSPLSNVAGTSRISRGVGMNWATYDKDSGMCALINETPNC LILNAGSIALTAIGSPLEYDAVNYPCHIDTNGYVEPRAKTTNKYLDVPFEVTTALSTKTL KCNAYVHTKYSDSCGTYFLCSDVKPNWFIRFLHMIGLYNTKRIVIFVCCTTTAIVLTIWI WKRFIKAKKEPAPPSFDKYLSNYDYDTTLDADNETEQRLDSSAYSWGEAVQRPSDVTPVK LSKIN
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_IV011230.fa Sequence name : BBOV_IV011230 Sequence length : 605 VALUES OF COMPUTED PARAMETERS Coef20 : 3.597 CoefTot : -0.909 ChDiff : -3 ZoneTo : 34 KR : 4 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.294 2.371 0.575 0.765 MesoH : -0.090 0.516 -0.217 0.247 MuHd_075 : 29.706 16.442 8.695 6.419 MuHd_095 : 23.756 14.509 5.136 5.409 MuHd_100 : 16.180 9.600 3.162 4.089 MuHd_105 : 14.510 10.809 2.150 3.567 Hmax_075 : 9.500 21.800 2.560 3.470 Hmax_095 : -1.663 17.938 -3.876 6.283 Hmax_100 : 4.400 10.000 1.868 4.440 Hmax_105 : 19.400 -0.400 -3.726 3.010 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9192 0.0808 DFMC : 0.9257 0.0743
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 605 BBOV_IV011230 MQLHYKMQSTSPKYNYKRMLCMVFVPVILSSFFAEDALASNSTLFAFHREPTNRRLTRRASRGQLLNSRRGSDDTSESSD 80 RYSGRSGGSKNSGQSPWIKYMQKFDIPRNHGSGIYVDLGGYESVGSKSYRMPVGKCPVVGKIIDLGNGADFLDPISSEDP 160 SYRGLAFPETAVDSNIPTQPKTRGSSSVTAAKLSPVSAKDLRRWGYEGNDVANCSEYASNLIPASDKTTKYRYPFVFDSD 240 NQMCYILYSAIQYNQGNRYCDNDGSSEEGTSSLLCMKPYKSAEDAHLYYGSAKVDPDWEENCPMHPVRDAIFGKWSGGSC 320 VAIAPAFQEYANSTEDCAAILFDNSATDLDIEVVNEEFNELKELTSGLKRLNLSKVANAIFSPLSNVAGTSRISRGVGMN 400 WATYDKDSGMCALINETPNCLILNAGSIALTAIGSPLEYDAVNYPCHIDTNGYVEPRAKTTNKYLDVPFEVTTALSTKTL 480 KCNAYVHTKYSDSCGTYFLCSDVKPNWFIRFLHMIGLYNTKRIVIFVCCTTTAIVLTIWIWKRFIKAKKEPAPPSFDKYL 560 SNYDYDTTLDADNETEQRLDSSAYSWGEAVQRPSDVTPVKLSKIN 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ..........................................................................P..... 400 ................................................................................ 480 ................................................................................ 560 ............................................. 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ BBOV_IV011230 6 -MQLHYK|MQ 0.071 . BBOV_IV011230 13 MQSTSPK|YN 0.093 . BBOV_IV011230 17 SPKYNYK|RM 0.060 . BBOV_IV011230 18 PKYNYKR|ML 0.231 . BBOV_IV011230 49 TLFAFHR|EP 0.092 . BBOV_IV011230 54 HREPTNR|RL 0.089 . BBOV_IV011230 55 REPTNRR|LT 0.109 . BBOV_IV011230 58 TNRRLTR|RA 0.488 . BBOV_IV011230 59 NRRLTRR|AS 0.290 . BBOV_IV011230 62 LTRRASR|GQ 0.157 . BBOV_IV011230 69 GQLLNSR|RG 0.071 . BBOV_IV011230 70 QLLNSRR|GS 0.153 . BBOV_IV011230 81 TSESSDR|YS 0.155 . BBOV_IV011230 85 SDRYSGR|SG 0.216 . BBOV_IV011230 90 GRSGGSK|NS 0.092 . BBOV_IV011230 99 GQSPWIK|YM 0.069 . BBOV_IV011230 103 WIKYMQK|FD 0.071 . BBOV_IV011230 108 QKFDIPR|NH 0.098 . BBOV_IV011230 127 YESVGSK|SY 0.072 . BBOV_IV011230 130 VGSKSYR|MP 0.119 . BBOV_IV011230 135 YRMPVGK|CP 0.069 . BBOV_IV011230 141 KCPVVGK|II 0.073 . BBOV_IV011230 163 SEDPSYR|GL 0.107 . BBOV_IV011230 181 NIPTQPK|TR 0.062 . BBOV_IV011230 183 PTQPKTR|GS 0.120 . BBOV_IV011230 192 SSVTAAK|LS 0.061 . BBOV_IV011230 199 LSPVSAK|DL 0.093 . BBOV_IV011230 202 VSAKDLR|RW 0.113 . BBOV_IV011230 203 SAKDLRR|WG 0.141 . BBOV_IV011230 227 LIPASDK|TT 0.060 . BBOV_IV011230 230 ASDKTTK|YR 0.068 . BBOV_IV011230 232 DKTTKYR|YP 0.094 . BBOV_IV011230 258 QYNQGNR|YC 0.096 . BBOV_IV011230 277 SSLLCMK|PY 0.067 . BBOV_IV011230 280 LCMKPYK|SA 0.123 . BBOV_IV011230 293 LYYGSAK|VD 0.067 . BBOV_IV011230 308 CPMHPVR|DA 0.201 . BBOV_IV011230 314 RDAIFGK|WS 0.091 . BBOV_IV011230 362 EEFNELK|EL 0.065 . BBOV_IV011230 369 ELTSGLK|RL 0.054 . BBOV_IV011230 370 LTSGLKR|LN 0.131 . BBOV_IV011230 375 KRLNLSK|VA 0.071 . BBOV_IV011230 392 NVAGTSR|IS 0.097 . BBOV_IV011230 395 GTSRISR|GV 0.669 *ProP* BBOV_IV011230 406 NWATYDK|DS 0.071 . BBOV_IV011230 457 NGYVEPR|AK 0.089 . BBOV_IV011230 459 YVEPRAK|TT 0.072 . BBOV_IV011230 463 RAKTTNK|YL 0.077 . BBOV_IV011230 478 TTALSTK|TL 0.062 . BBOV_IV011230 481 LSTKTLK|CN 0.058 . BBOV_IV011230 489 NAYVHTK|YS 0.080 . BBOV_IV011230 504 FLCSDVK|PN 0.061 . BBOV_IV011230 510 KPNWFIR|FL 0.180 . BBOV_IV011230 521 IGLYNTK|RI 0.056 . BBOV_IV011230 522 GLYNTKR|IV 0.254 . BBOV_IV011230 542 LTIWIWK|RF 0.061 . BBOV_IV011230 543 TIWIWKR|FI 0.233 . BBOV_IV011230 546 IWKRFIK|AK 0.118 . BBOV_IV011230 548 KRFIKAK|KE 0.069 . BBOV_IV011230 549 RFIKAKK|EP 0.078 . BBOV_IV011230 558 APPSFDK|YL 0.078 . BBOV_IV011230 578 DNETEQR|LD 0.077 . BBOV_IV011230 592 WGEAVQR|PS 0.083 . BBOV_IV011230 600 SDVTPVK|LS 0.061 . BBOV_IV011230 603 TPVKLSK|IN 0.068 . ____________________________^_________________

  • Fasta :-

    >BBOV_IV011230 AAAGCGACCAAGGGGAATTAGATTCTCTTATATAAAAATGGATGTGAACTAAACTCTGAA TGCCCTTCAGTTGTCCATAGGCGAACCAATTCACCGTCACTCTGTTGGTTCCGCTTTCTT AGTGAAGCTATATGGTCACATTTGATTACTTTGAAGGCGATGTGTAAGATATAAACTACA TTTTCTATTATATATGCTGATATATATAACCAGCAAAATAGAAAACTCATAGACAATCGT AGTATAATGCAGTTACATTACAAAATGCAGTCAACTTCTCCCAAATATAACTACAAGCGC ATGCTTTGCATGGTTTTTGTCCCAGTTATCTTATCGTCATTTTTTGCGGAAGATGCTTTA GCTTCCAACTCCACACTCTTCGCTTTCCACAGGGAACCAACCAATCGTAGGCTTACCAGA AGGGCGTCAAGAGGACAGTTACTCAACTCAAGGAGGGGCTCGGATGATACTTCCGAATCT TCCGATAGATACTCAGGTAGGTCGGGTGGCTCTAAGAACTCGGGCCAATCCCCTTGGATC AAGTATATGCAAAAGTTCGACATTCCCCGTAATCACGGCTCTGGAATCTATGTCGATCTT GGAGGATATGAATCCGTTGGTTCAAAAAGTTATCGTATGCCCGTTGGTAAGTGCCCAGTA GTCGGTAAAATTATAGACCTTGGAAATGGTGCCGACTTCCTCGATCCCATTTCATCAGAA GACCCAAGTTACCGTGGTTTGGCATTCCCCGAGACTGCTGTGGACTCCAATATTCCCACA CAACCAAAGACACGTGGTTCTTCATCAGTAACTGCCGCTAAATTATCTCCTGTTTCGGCG AAAGATCTGAGACGTTGGGGATATGAAGGTAATGATGTAGCGAATTGCTCAGAATATGCT AGTAACCTCATTCCCGCATCAGACAAAACTACCAAATATAGGTATCCTTTTGTTTTTGAC AGTGATAACCAGATGTGTTACATACTGTACTCTGCCATACAATACAATCAAGGAAATAGG TATTGTGACAATGATGGTAGCTCAGAAGAAGGTACAAGCTCTTTGCTTTGCATGAAACCT TACAAGAGCGCTGAGGATGCACACTTATACTACGGTTCTGCGAAAGTTGACCCCGATTGG GAAGAAAATTGTCCCATGCACCCGGTAAGGGATGCCATTTTTGGTAAATGGTCCGGTGGC TCTTGTGTTGCCATTGCTCCTGCATTCCAAGAATATGCCAACAGCACCGAAGATTGTGCG GCTATATTATTCGATAATTCTGCGACTGACTTGGATATCGAAGTTGTTAACGAAGAGTTT AATGAACTTAAAGAATTGACCAGTGGGCTTAAAAGGTTGAACTTGTCAAAAGTTGCCAAT GCTATTTTTTCTCCCCTCTCCAATGTTGCAGGTACCAGTCGAATTTCACGTGGTGTGGGT ATGAACTGGGCTACATACGATAAAGATTCTGGTATGTGTGCTCTCATTAACGAAACTCCT AACTGTTTGATCTTGAACGCGGGTAGCATTGCTCTCACGGCTATAGGTTCACCTCTCGAG TACGACGCTGTTAACTATCCTTGCCACATCGACACCAATGGTTACGTTGAGCCACGTGCA AAGACTACTAACAAGTACCTCGATGTTCCTTTCGAGGTCACAACTGCTTTGAGCACGAAG ACACTAAAATGCAATGCCTACGTTCATACCAAGTACTCTGACAGTTGTGGTACCTATTTC CTGTGCTCAGACGTTAAACCTAACTGGTTCATTAGGTTCTTACACATGATCGGACTCTAC AACACAAAGCGTATCGTAATATTCGTCTGCTGTACCACTACCGCCATCGTTCTCACCATC TGGATATGGAAACGATTCATCAAGGCTAAAAAAGAGCCAGCCCCTCCAAGTTTCGACAAA TACCTAAGCAACTATGATTATGATACAACCCTAGATGCCGACAACGAAACAGAACAGCGT TTGGATTCCTCTGCTTACAGCTGGGGAGAGGCTGTACAAAGACCAAGTGATGTCACCCCT GTAAAACTCTCTAAAATCAACTAAAGGGTGTGATAACTAAATGCAGTAGTCACTTCAAGA CATCTCATTGACCGTGTGAATAAACATCGTGGTCGCTTGTTAATCAATTGGAACCAAAAT CAGATTCCTCATGCAAGCTTTATAATGAGATGGTATATCATCCTGCTAATGAACTTGTAT AATATGTGTAACTATTTTTCAACCTTTCTGCTTAGTATCGGTATGTTTGTAT
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  • Fasta :-

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IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
BBOV_IV01123061 STRRASRGQL0.992unspBBOV_IV01123061 STRRASRGQL0.992unspBBOV_IV01123061 STRRASRGQL0.992unspBBOV_IV01123072 SSRRGSDDTS0.995unspBBOV_IV01123076 SSDDTSESSD0.991unspBBOV_IV01123083 SSDRYSGRSG0.997unspBBOV_IV011230128 SVGSKSYRMP0.993unspBBOV_IV011230156 SLDPISSEDP0.997unspBBOV_IV011230187 SRGSSSVTAA0.99unspBBOV_IV011230197 SLSPVSAKDL0.998unspBBOV_IV011230266 SNDGSSEEGT0.996unspBBOV_IV011230281 SKPYKSAEDA0.998unspBBOV_IV011230345 SLFDNSATDL0.99unspBBOV_IV011230561 SDKYLSNYDY0.995unspBBOV_IV011230585 SSSAYSWGEA0.997unspBBOV_IV01123011 SMQSTSPKYN0.993unspBBOV_IV01123057 TNRRLTRRAS0.992unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India