BBOV_IV011870 | cell division protein metalloprotease FtsH, putative

_IDPredictionOTHERSPmTPCS_Position
BBOV_IV011870OTHER0.9999370.0000550.000008
No Results

  • Fasta :-

    >BBOV_IV011870 MDPANTRRPPLGGAQYSNASYDEQDYAYEYDNDSSAITRPFFGKHAGFAQMPYSHDRNGE TPMTDPGSTTSFAANISSGLANKWNMFRSSIYKSLPPETPSVITGPSPMAQNMSKSAWSF NVPSVMSYFMTSVYNSCVTLLSAGMWLLLQVLGIAAGVVLTGLILTALGSFLVPKDNDFG NVTPKNKPATRDDRTQQTAPPPERPPVMLERVYFKDIMGIDEAKEELMEVVKFIKQPKLY HDIGAKIPKGVLLVGPPGTGKTMLAKAVATEANIPFIYTSGPEFVEIFVGQGAQRVRNLF AKARKQAPCIVFIDEIDAIGAKRASGSLGGQNREHDQTLNQLLVEMDGFNLSTGITVLAA TNRMEALDRALLRPGRFDRVVHIPLPSLDGREAILKRYLSGIKYDKDNVDVRALAKLTPG YSGADLKNLVNEAALNCVRSGRTQVSTTDLQEARDKVGMGSIRRTTQPELQRKMTAYHEA GHALVAFHLYPDADPVHKATIIHRGSALGFVEQLPEDDRQSYKLAQMKARLAICMGGRIA EELVFGKENVTSGASSDIVAASELAYRMVTEWGMSPKLGPVNLRRIGGIQTPHGTRKLSH DTAQTVEQEVERLVSEAHFRAASILRRHRNQLERIAERLLEEETLTGEQIRQIIAETR
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/BBOV_IV011870.fa Sequence name : BBOV_IV011870 Sequence length : 658 VALUES OF COMPUTED PARAMETERS Coef20 : 3.382 CoefTot : -1.195 ChDiff : 4 ZoneTo : 21 KR : 2 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.129 2.329 0.454 0.806 MesoH : 1.248 1.082 0.054 0.477 MuHd_075 : 20.377 7.808 3.090 3.868 MuHd_095 : 15.757 4.597 3.202 2.299 MuHd_100 : 19.351 4.466 4.387 2.725 MuHd_105 : 21.024 9.128 5.591 3.313 Hmax_075 : -1.983 -3.600 -3.466 0.900 Hmax_095 : -0.800 -2.300 -2.665 0.516 Hmax_100 : 4.600 -3.800 -0.731 1.070 Hmax_105 : 4.500 0.500 -0.452 1.730 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9903 0.0097 DFMC : 0.9833 0.0167
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 658 BBOV_IV011870 MDPANTRRPPLGGAQYSNASYDEQDYAYEYDNDSSAITRPFFGKHAGFAQMPYSHDRNGETPMTDPGSTTSFAANISSGL 80 ANKWNMFRSSIYKSLPPETPSVITGPSPMAQNMSKSAWSFNVPSVMSYFMTSVYNSCVTLLSAGMWLLLQVLGIAAGVVL 160 TGLILTALGSFLVPKDNDFGNVTPKNKPATRDDRTQQTAPPPERPPVMLERVYFKDIMGIDEAKEELMEVVKFIKQPKLY 240 HDIGAKIPKGVLLVGPPGTGKTMLAKAVATEANIPFIYTSGPEFVEIFVGQGAQRVRNLFAKARKQAPCIVFIDEIDAIG 320 AKRASGSLGGQNREHDQTLNQLLVEMDGFNLSTGITVLAATNRMEALDRALLRPGRFDRVVHIPLPSLDGREAILKRYLS 400 GIKYDKDNVDVRALAKLTPGYSGADLKNLVNEAALNCVRSGRTQVSTTDLQEARDKVGMGSIRRTTQPELQRKMTAYHEA 480 GHALVAFHLYPDADPVHKATIIHRGSALGFVEQLPEDDRQSYKLAQMKARLAICMGGRIAEELVFGKENVTSGASSDIVA 560 ASELAYRMVTEWGMSPKLGPVNLRRIGGIQTPHGTRKLSHDTAQTVEQEVERLVSEAHFRAASILRRHRNQLERIAERLL 640 EEETLTGEQIRQIIAETR 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ..........................................................P..................... 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 .................. 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ BBOV_IV011870 7 MDPANTR|RP 0.072 . BBOV_IV011870 8 DPANTRR|PP 0.137 . BBOV_IV011870 39 DSSAITR|PF 0.113 . BBOV_IV011870 44 TRPFFGK|HA 0.112 . BBOV_IV011870 57 MPYSHDR|NG 0.106 . BBOV_IV011870 83 SSGLANK|WN 0.057 . BBOV_IV011870 88 NKWNMFR|SS 0.108 . BBOV_IV011870 93 FRSSIYK|SL 0.117 . BBOV_IV011870 115 MAQNMSK|SA 0.089 . BBOV_IV011870 175 GSFLVPK|DN 0.092 . BBOV_IV011870 185 FGNVTPK|NK 0.067 . BBOV_IV011870 187 NVTPKNK|PA 0.067 . BBOV_IV011870 191 KNKPATR|DD 0.150 . BBOV_IV011870 194 PATRDDR|TQ 0.173 . BBOV_IV011870 204 TAPPPER|PP 0.081 . BBOV_IV011870 211 PPVMLER|VY 0.102 . BBOV_IV011870 215 LERVYFK|DI 0.098 . BBOV_IV011870 224 MGIDEAK|EE 0.059 . BBOV_IV011870 232 ELMEVVK|FI 0.067 . BBOV_IV011870 235 EVVKFIK|QP 0.055 . BBOV_IV011870 238 KFIKQPK|LY 0.074 . BBOV_IV011870 246 YHDIGAK|IP 0.058 . BBOV_IV011870 249 IGAKIPK|GV 0.094 . BBOV_IV011870 261 GPPGTGK|TM 0.058 . BBOV_IV011870 266 GKTMLAK|AV 0.086 . BBOV_IV011870 295 VGQGAQR|VR 0.065 . BBOV_IV011870 297 QGAQRVR|NL 0.096 . BBOV_IV011870 302 VRNLFAK|AR 0.085 . BBOV_IV011870 304 NLFAKAR|KQ 0.094 . BBOV_IV011870 305 LFAKARK|QA 0.093 . BBOV_IV011870 322 IDAIGAK|RA 0.081 . BBOV_IV011870 323 DAIGAKR|AS 0.193 . BBOV_IV011870 333 SLGGQNR|EH 0.130 . BBOV_IV011870 363 VLAATNR|ME 0.074 . BBOV_IV011870 369 RMEALDR|AL 0.081 . BBOV_IV011870 373 LDRALLR|PG 0.081 . BBOV_IV011870 376 ALLRPGR|FD 0.179 . BBOV_IV011870 379 RPGRFDR|VV 0.563 *ProP* BBOV_IV011870 391 LPSLDGR|EA 0.119 . BBOV_IV011870 396 GREAILK|RY 0.060 . BBOV_IV011870 397 REAILKR|YL 0.274 . BBOV_IV011870 403 RYLSGIK|YD 0.056 . BBOV_IV011870 406 SGIKYDK|DN 0.072 . BBOV_IV011870 412 KDNVDVR|AL 0.110 . BBOV_IV011870 416 DVRALAK|LT 0.059 . BBOV_IV011870 427 YSGADLK|NL 0.058 . BBOV_IV011870 439 AALNCVR|SG 0.105 . BBOV_IV011870 442 NCVRSGR|TQ 0.159 . BBOV_IV011870 454 TDLQEAR|DK 0.107 . BBOV_IV011870 456 LQEARDK|VG 0.060 . BBOV_IV011870 463 VGMGSIR|RT 0.096 . BBOV_IV011870 464 GMGSIRR|TT 0.136 . BBOV_IV011870 472 TQPELQR|KM 0.081 . BBOV_IV011870 473 QPELQRK|MT 0.104 . BBOV_IV011870 498 DADPVHK|AT 0.069 . BBOV_IV011870 504 KATIIHR|GS 0.088 . BBOV_IV011870 519 QLPEDDR|QS 0.075 . BBOV_IV011870 523 DDRQSYK|LA 0.070 . BBOV_IV011870 528 YKLAQMK|AR 0.065 . BBOV_IV011870 530 LAQMKAR|LA 0.146 . BBOV_IV011870 538 AICMGGR|IA 0.103 . BBOV_IV011870 547 EELVFGK|EN 0.063 . BBOV_IV011870 567 ASELAYR|MV 0.132 . BBOV_IV011870 577 EWGMSPK|LG 0.065 . BBOV_IV011870 584 LGPVNLR|RI 0.113 . BBOV_IV011870 585 GPVNLRR|IG 0.195 . BBOV_IV011870 596 QTPHGTR|KL 0.081 . BBOV_IV011870 597 TPHGTRK|LS 0.126 . BBOV_IV011870 612 VEQEVER|LV 0.119 . BBOV_IV011870 620 VSEAHFR|AA 0.138 . BBOV_IV011870 626 RAASILR|RH 0.085 . BBOV_IV011870 627 AASILRR|HR 0.167 . BBOV_IV011870 629 SILRRHR|NQ 0.141 . BBOV_IV011870 634 HRNQLER|IA 0.155 . BBOV_IV011870 638 LERIAER|LL 0.096 . BBOV_IV011870 651 LTGEQIR|QI 0.118 . BBOV_IV011870 658 QIIAETR|-- 0.092 . ____________________________^_________________

  • Fasta :-

    >BBOV_IV011870 ATGGATCCCGCGAACACACGAAGACCGCCACTAGGAGGCGCGCAATACTCCAACGCATCG TATGATGAACAGGATTATGCATACGAATATGATAATGACTCATCGGCAATAACACGACCA TTCTTCGGCAAACACGCCGGATTCGCACAGATGCCATACAGCCACGATCGCAATGGCGAA ACACCAATGACCGACCCAGGAAGTACCACGAGCTTCGCAGCCAATATCAGTAGTGGATTG GCAAACAAATGGAATATGTTCCGCAGCAGTATATACAAATCACTACCACCGGAGACTCCA TCGGTCATCACTGGACCGTCGCCAATGGCACAAAATATGAGTAAATCCGCATGGTCGTTT AACGTACCGTCAGTTATGTCATACTTCATGACGTCTGTATACAACTCATGTGTTACATTA CTGTCAGCGGGAATGTGGCTGCTGCTACAGGTACTGGGAATAGCTGCAGGAGTTGTACTT ACAGGACTCATATTAACGGCACTAGGTAGCTTCCTTGTGCCAAAAGATAATGATTTCGGT AATGTAACGCCGAAGAATAAACCGGCTACCAGAGATGACCGGACGCAACAGACGGCACCA CCACCTGAAAGACCACCTGTTATGCTAGAACGAGTGTACTTCAAGGATATAATGGGCATA GACGAGGCGAAAGAAGAGTTAATGGAAGTAGTGAAGTTCATTAAACAGCCTAAACTATAC CACGATATTGGAGCTAAGATACCAAAAGGCGTTTTGTTAGTGGGACCACCAGGAACTGGG AAGACAATGCTAGCCAAGGCAGTAGCCACCGAAGCTAACATACCCTTTATATATACCAGT GGACCGGAGTTTGTGGAAATATTCGTGGGTCAGGGTGCGCAACGAGTACGTAATTTATTT GCAAAAGCAAGGAAGCAAGCACCATGTATAGTTTTTATAGATGAAATTGATGCCATAGGA GCCAAGAGAGCGTCAGGATCACTAGGTGGACAAAATCGCGAACATGACCAAACCTTAAAC CAGCTGCTAGTAGAAATGGATGGATTCAATCTGTCCACAGGAATCACCGTGCTGGCAGCA ACAAACAGAATGGAGGCACTTGATAGAGCACTACTAAGACCAGGTAGATTCGATCGGGTA GTGCATATACCACTGCCTTCACTAGACGGCCGTGAAGCTATACTCAAGAGATACCTATCG GGAATAAAATATGACAAGGATAACGTAGATGTCAGGGCATTGGCCAAGCTGACACCAGGG TACTCCGGTGCAGATTTGAAAAACCTAGTCAATGAAGCTGCACTTAACTGTGTACGTAGC GGGAGAACACAAGTAAGCACAACTGATCTACAGGAAGCAAGAGATAAAGTAGGTATGGGA TCAATACGACGAACGACGCAACCTGAATTGCAAAGGAAGATGACGGCATACCACGAAGCG GGCCATGCACTGGTAGCATTCCACCTGTACCCAGATGCTGACCCTGTACATAAAGCGACC ATCATACATAGAGGGTCCGCATTGGGATTCGTAGAACAACTGCCTGAAGATGATAGGCAA AGCTATAAACTAGCACAAATGAAAGCAAGATTGGCTATATGCATGGGAGGACGTATCGCA GAAGAACTTGTATTCGGAAAGGAAAATGTAACATCAGGAGCATCCAGTGATATTGTAGCA GCATCGGAATTGGCATACAGAATGGTCACAGAATGGGGAATGAGCCCAAAATTAGGACCT GTCAATCTAAGACGAATCGGTGGTATACAAACACCACATGGAACACGTAAACTGTCACAT GATACTGCACAGACTGTGGAGCAAGAAGTTGAAAGATTAGTTAGCGAAGCACACTTCCGT GCAGCATCCATACTACGGAGACATCGAAACCAGCTAGAACGAATTGCTGAACGACTACTG GAAGAGGAAACTTTAACCGGTGAACAGATTCGACAGATAATCGCCGAAACTCGATAA
  • Download Fasta

  • Fasta :-

    MDPANTRRPPLGGAQYSNASYDEQDYAYEYDNDSSAITRPFFGKHAGFAQMPYSHDRNGE TPMTDPGSTTSFAANISSGLANKWNMFRSSIYKSLPPETPSVITGPSPMAQNMSKSAWSF NVPSVMSYFMTSVYNSCVTLLSAGMWLLLQVLGIAAGVVLTGLILTALGSFLVPKDNDFG NVTPKNKPATRDDRTQQTAPPPERPPVMLERVYFKDIMGIDEAKEELMEVVKFIKQPKLY HDIGAKIPKGVLLVGPPGTGKTMLAKAVATEANIPFIYTSGPEFVEIFVGQGAQRVRNLF AKARKQAPCIVFIDEIDAIGAKRASGSLGGQNREHDQTLNQLLVEMDGFNLSTGITVLAA TNRMEALDRALLRPGRFDRVVHIPLPSLDGREAILKRYLSGIKYDKDNVDVRALAKLTPG YSGADLKNLVNEAALNCVRSGRTQVSTTDLQEARDKVGMGSIRRTTQPELQRKMTAYHEA GHALVAFHLYPDADPVHKATIIHRGSALGFVEQLPEDDRQSYKLAQMKARLAICMGGRIA EELVFGKENVTSGASSDIVAASELAYRMVTEWGMSPKLGPVNLRRIGGIQTPHGTRKLSH DTAQTVEQEVERLVSEAHFRAASILRRHRNQLERIAERLLEEETLTGEQIRQIIAETR

  • title: ATP binding site
  • coordinates: P256,P257,G258,T259,G260,K261,T262,M263,D314,N362
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
BBOV_IV011870521 SDDRQSYKLA0.991unspBBOV_IV011870521 SDDRQSYKLA0.991unspBBOV_IV011870521 SDDRQSYKLA0.991unspBBOV_IV011870575 SEWGMSPKLG0.994unspBBOV_IV01187020 SYSNASYDEQ0.992unspBBOV_IV011870466 TIRRTTQPEL0.992unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India