Chro.10321 | cg1 protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0003677      

  • Computed_GO_Functions:  DNA binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
Chro.10321SP0.0110840.9885560.000360CS pos: 24-25. CHG-NK. Pr: 0.8816
No Results

  • Fasta :-

    >Chro.10321 MNFIFGAILWGLLIFPALFQKCHGNKYRTNLDKYTKIYQYQTSEIELYFPNNDIFENERE NSQAKEDIKDLKSTEVSDIRYSFMKLGGKEFLCGFEGHGKNDSLNLSEETNQSWDNMNSK IKNYLKKSKISWLIERCFIYTKKKDINNGIHVQVDTFEICVGVSVRHKRQIIDKETSDNI LESQFNIVGDYKPTEDTFYENGTIIHYYNPAIENLKGDSGYSASIEFKCSYNKSGISQVT EDVNKEFKPVIKVDFLSPSFCDWRVDESKNITSLHKLESLLLPLENRCQNFTDSRFWNYE LCNLYAVSQFKKDASTQELRLFNLGIHPNTAQILNITDDLEEYLSKNLISNIVNTIKPGR VSLLENITTKIEPRNINELISGKYVHSKYVITVMLLNGTHCPENNQKRSIKLVFECPDNF ESISDYFRIVNVIEDSTCNYEMLIISPVICSHPLLMPPPIYKHGKVKCIPKNLIINKLIE DESTEHLFESQGTRSESGLVSISQIGNQFEAVNIEYINSIKNGSGTQHFFTLSDSPRIRN SNLTSPKFLVGQIVQHLWWNYYGVVVGWDWELNAPKQWADNIYQKYPPESRKKPHYLLLV HQKETLFNNSSPIESIPSNLTHSYIPEIALKRVPNLDSDNNFSSKNIIINKYLNTYFSYW SEIHQRFIPNTNSTLWRIYPKDFDKLNERDEL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/271 Sequence name : 271 Sequence length : 692 VALUES OF COMPUTED PARAMETERS Coef20 : 4.185 CoefTot : -1.155 ChDiff : -8 ZoneTo : 31 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.482 2.365 0.391 0.972 MesoH : -0.670 0.253 -0.400 0.191 MuHd_075 : 28.165 27.498 8.765 6.920 MuHd_095 : 19.202 11.541 5.070 4.397 MuHd_100 : 17.429 15.982 6.519 4.545 MuHd_105 : 17.768 17.056 6.851 4.231 Hmax_075 : 14.233 29.050 2.866 6.417 Hmax_095 : 7.500 11.800 4.681 4.170 Hmax_100 : 21.100 21.800 5.225 7.980 Hmax_105 : 19.950 19.800 5.690 6.974 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6931 0.3069 DFMC : 0.6954 0.3046
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 692 Chro.10321 MNFIFGAILWGLLIFPALFQKCHGNKYRTNLDKYTKIYQYQTSEIELYFPNNDIFENERENSQAKEDIKDLKSTEVSDIR 80 YSFMKLGGKEFLCGFEGHGKNDSLNLSEETNQSWDNMNSKIKNYLKKSKISWLIERCFIYTKKKDINNGIHVQVDTFEIC 160 VGVSVRHKRQIIDKETSDNILESQFNIVGDYKPTEDTFYENGTIIHYYNPAIENLKGDSGYSASIEFKCSYNKSGISQVT 240 EDVNKEFKPVIKVDFLSPSFCDWRVDESKNITSLHKLESLLLPLENRCQNFTDSRFWNYELCNLYAVSQFKKDASTQELR 320 LFNLGIHPNTAQILNITDDLEEYLSKNLISNIVNTIKPGRVSLLENITTKIEPRNINELISGKYVHSKYVITVMLLNGTH 400 CPENNQKRSIKLVFECPDNFESISDYFRIVNVIEDSTCNYEMLIISPVICSHPLLMPPPIYKHGKVKCIPKNLIINKLIE 480 DESTEHLFESQGTRSESGLVSISQIGNQFEAVNIEYINSIKNGSGTQHFFTLSDSPRIRNSNLTSPKFLVGQIVQHLWWN 560 YYGVVVGWDWELNAPKQWADNIYQKYPPESRKKPHYLLLVHQKETLFNNSSPIESIPSNLTHSYIPEIALKRVPNLDSDN 640 NFSSKNIIINKYLNTYFSYWSEIHQRFIPNTNSTLWRIYPKDFDKLNERDEL 720 ................................................................................ 80 ................................................................................ 160 ........P....................................................................... 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 .................................................... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ Chro.10321 21 FPALFQK|CH 0.074 . Chro.10321 26 QKCHGNK|YR 0.062 . Chro.10321 28 CHGNKYR|TN 0.103 . Chro.10321 33 YRTNLDK|YT 0.083 . Chro.10321 36 NLDKYTK|IY 0.059 . Chro.10321 59 DIFENER|EN 0.087 . Chro.10321 65 RENSQAK|ED 0.076 . Chro.10321 69 QAKEDIK|DL 0.071 . Chro.10321 72 EDIKDLK|ST 0.085 . Chro.10321 80 TEVSDIR|YS 0.099 . Chro.10321 85 IRYSFMK|LG 0.081 . Chro.10321 89 FMKLGGK|EF 0.056 . Chro.10321 100 GFEGHGK|ND 0.063 . Chro.10321 120 WDNMNSK|IK 0.064 . Chro.10321 122 NMNSKIK|NY 0.064 . Chro.10321 126 KIKNYLK|KS 0.057 . Chro.10321 127 IKNYLKK|SK 0.190 . Chro.10321 129 NYLKKSK|IS 0.071 . Chro.10321 136 ISWLIER|CF 0.073 . Chro.10321 142 RCFIYTK|KK 0.060 . Chro.10321 143 CFIYTKK|KD 0.086 . Chro.10321 144 FIYTKKK|DI 0.198 . Chro.10321 166 CVGVSVR|HK 0.114 . Chro.10321 168 GVSVRHK|RQ 0.064 . Chro.10321 169 VSVRHKR|QI 0.784 *ProP* Chro.10321 174 KRQIIDK|ET 0.086 . Chro.10321 192 NIVGDYK|PT 0.066 . Chro.10321 216 PAIENLK|GD 0.061 . Chro.10321 228 SASIEFK|CS 0.072 . Chro.10321 233 FKCSYNK|SG 0.069 . Chro.10321 245 VTEDVNK|EF 0.061 . Chro.10321 248 DVNKEFK|PV 0.085 . Chro.10321 252 EFKPVIK|VD 0.058 . Chro.10321 264 PSFCDWR|VD 0.081 . Chro.10321 269 WRVDESK|NI 0.068 . Chro.10321 276 NITSLHK|LE 0.058 . Chro.10321 287 LLPLENR|CQ 0.066 . Chro.10321 295 QNFTDSR|FW 0.099 . Chro.10321 311 YAVSQFK|KD 0.058 . Chro.10321 312 AVSQFKK|DA 0.366 . Chro.10321 320 ASTQELR|LF 0.074 . Chro.10321 346 LEEYLSK|NL 0.061 . Chro.10321 357 NIVNTIK|PG 0.064 . Chro.10321 360 NTIKPGR|VS 0.072 . Chro.10321 370 LENITTK|IE 0.062 . Chro.10321 374 TTKIEPR|NI 0.106 . Chro.10321 383 NELISGK|YV 0.077 . Chro.10321 388 GKYVHSK|YV 0.112 . Chro.10321 407 CPENNQK|RS 0.060 . Chro.10321 408 PENNQKR|SI 0.415 . Chro.10321 411 NQKRSIK|LV 0.228 . Chro.10321 428 SISDYFR|IV 0.178 . Chro.10321 462 MPPPIYK|HG 0.057 . Chro.10321 465 PIYKHGK|VK 0.065 . Chro.10321 467 YKHGKVK|CI 0.082 . Chro.10321 471 KVKCIPK|NL 0.063 . Chro.10321 477 KNLIINK|LI 0.069 . Chro.10321 494 FESQGTR|SE 0.137 . Chro.10321 521 EYINSIK|NG 0.063 . Chro.10321 537 TLSDSPR|IR 0.119 . Chro.10321 539 SDSPRIR|NS 0.086 . Chro.10321 547 SNLTSPK|FL 0.080 . Chro.10321 576 WELNAPK|QW 0.067 . Chro.10321 585 ADNIYQK|YP 0.066 . Chro.10321 591 KYPPESR|KK 0.069 . Chro.10321 592 YPPESRK|KP 0.083 . Chro.10321 593 PPESRKK|PH 0.090 . Chro.10321 603 LLLVHQK|ET 0.062 . Chro.10321 631 IPEIALK|RV 0.062 . Chro.10321 632 PEIALKR|VP 0.083 . Chro.10321 645 DNNFSSK|NI 0.069 . Chro.10321 651 KNIIINK|YL 0.072 . Chro.10321 666 WSEIHQR|FI 0.116 . Chro.10321 677 TNSTLWR|IY 0.124 . Chro.10321 681 LWRIYPK|DF 0.079 . Chro.10321 685 YPKDFDK|LN 0.069 . Chro.10321 689 FDKLNER|DE 0.075 . ____________________________^_________________

  • Fasta :-

    >Chro.10321 ATGAATTTCATTTTTGGAGCAATTTTGTGGGGCTTGTTAATCTTTCCTGCTCTTTTTCAA AAATGTCATGGTAATAAATATAGAACAAATTTAGATAAATATACTAAAATATATCAGTAC CAAACAAGCGAAATTGAACTTTATTTTCCAAATAATGATATTTTTGAGAACGAAAGAGAA AACTCCCAGGCTAAAGAGGATATAAAAGATTTAAAGTCAACTGAAGTGAGCGATATTAGG TACAGCTTCATGAAATTAGGTGGAAAAGAATTTCTATGTGGTTTTGAGGGACATGGAAAA AATGATAGCCTTAATTTATCAGAAGAAACTAATCAATCTTGGGATAATATGAATTCTAAA ATCAAGAACTATTTAAAGAAGAGTAAAATTTCATGGTTAATAGAACGGTGTTTCATATAT ACAAAGAAGAAAGATATTAATAATGGTATTCATGTCCAAGTAGATACCTTTGAAATATGT GTTGGTGTTTCAGTTCGTCACAAAAGACAGATAATTGACAAAGAAACCAGTGACAATATA TTGGAAAGTCAGTTCAATATTGTAGGCGATTATAAACCTACGGAAGATACATTTTATGAA AATGGAACAATCATCCACTACTATAACCCAGCGATAGAAAACCTAAAGGGAGATTCTGGG TATTCGGCTTCAATTGAATTTAAATGTAGCTATAATAAATCAGGAATCAGTCAAGTAACA GAAGATGTTAACAAAGAATTTAAACCTGTGATTAAAGTAGACTTTTTGTCCCCTTCATTT TGTGATTGGAGGGTAGACGAAAGCAAGAATATTACATCTTTGCATAAGCTGGAATCTTTA CTGCTACCATTAGAAAACAGATGCCAAAACTTTACGGATTCAAGATTTTGGAATTATGAG CTTTGTAATCTGTACGCCGTATCTCAGTTCAAAAAGGATGCCTCAACTCAAGAATTGAGA CTATTCAATTTAGGAATTCATCCAAACACTGCTCAAATACTAAATATAACAGATGATTTA GAAGAATATTTATCTAAGAATTTAATTTCAAATATAGTTAATACAATAAAGCCTGGTAGA GTTTCTTTACTTGAAAATATAACAACAAAAATTGAACCAAGAAACATAAACGAGTTGATT TCTGGAAAATATGTGCATAGTAAATATGTTATCACAGTAATGTTGTTAAATGGAACTCAT TGTCCAGAAAATAATCAGAAAAGAAGTATTAAATTAGTATTCGAATGCCCTGATAACTTT GAGAGTATCTCTGATTATTTTAGAATAGTAAATGTTATTGAGGATTCGACATGTAATTAT GAGATGTTAATCATTTCCCCCGTAATCTGCTCTCACCCTTTGTTGATGCCTCCTCCAATT TATAAGCACGGGAAAGTCAAATGCATACCTAAGAATTTGATTATTAACAAATTAATAGAG GATGAATCTACAGAGCATTTATTTGAATCTCAAGGAACAAGAAGTGAAAGTGGGCTAGTT AGTATTAGTCAAATTGGCAATCAGTTTGAAGCAGTTAATATAGAATATATAAATTCGATC AAGAATGGGAGCGGTACTCAACATTTCTTTACTCTGAGCGATTCTCCCAGGATTAGGAAC TCTAACCTAACCAGCCCAAAATTTTTGGTCGGTCAGATTGTGCAACATTTATGGTGGAAC TATTATGGCGTCGTAGTTGGGTGGGATTGGGAACTAAATGCACCAAAACAATGGGCAGAC AACATTTATCAAAAATACCCTCCAGAATCAAGGAAAAAGCCTCACTATTTGTTACTAGTT CATCAGAAAGAAACTCTCTTCAACAACTCATCGCCAATTGAATCTATTCCATCAAATCTC ACACACTCGTACATTCCAGAAATTGCATTGAAACGCGTTCCCAACCTAGATTCTGATAAT AATTTCTCCAGCAAAAATATCATTATTAATAAATATCTAAACACGTACTTCTCCTATTGG TCAGAAATCCATCAGAGATTCATACCTAACACAAATAGTACCCTTTGGAGAATTTACCCG AAGGATTTCGACAAACTAAACGAAAGGGATGAACTATAG
  • Download Fasta

  • Fasta :-

    MNFIFGAILWGLLIFPALFQKCHGNKYRTNLDKYTKIYQYQTSEIELYFPNNDIFENERE NSQAKEDIKDLKSTEVSDIRYSFMKLGGKEFLCGFEGHGKNDSLNLSEETNQSWDNMNSK IKNYLKKSKISWLIERCFIYTKKKDINNGIHVQVDTFEICVGVSVRHKRQIIDKETSDNI LESQFNIVGDYKPTEDTFYENGTIIHYYNPAIENLKGDSGYSASIEFKCSYNKSGISQVT EDVNKEFKPVIKVDFLSPSFCDWRVDESKNITSLHKLESLLLPLENRCQNFTDSRFWNYE LCNLYAVSQFKKDASTQELRLFNLGIHPNTAQILNITDDLEEYLSKNLISNIVNTIKPGR VSLLENITTKIEPRNINELISGKYVHSKYVITVMLLNGTHCPENNQKRSIKLVFECPDNF ESISDYFRIVNVIEDSTCNYEMLIISPVICSHPLLMPPPIYKHGKVKCIPKNLIINKLIE DESTEHLFESQGTRSESGLVSISQIGNQFEAVNIEYINSIKNGSGTQHFFTLSDSPRIRN SNLTSPKFLVGQIVQHLWWNYYGVVVGWDWELNAPKQWADNIYQKYPPESRKKPHYLLLV HQKETLFNNSSPIESIPSNLTHSYIPEIALKRVPNLDSDNNFSSKNIIINKYLNTYFSYW SEIHQRFIPNTNSTLWRIYPKDFDKLNERDEL

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
Chro.10321590 SYPPESRKKP0.994unspChro.10321590 SYPPESRKKP0.994unspChro.10321590 SYPPESRKKP0.994unspChro.1032173 SKDLKSTEVS0.996unspChro.10321315 SKKDASTQEL0.993unsp

Chro.10321      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India