Chro.10431 | hypothetical protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0003824      GO:0046872      

  • Computed_GO_Functions:  catalytic activity      metal ion binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
Chro.10431OTHER0.9997660.0000970.000137
No Results

  • Fasta :-

    >Chro.10431 MADIIFKSNESIRSLNSKNSNREDFIENDNMIDESALLVDLKQKEESFTEFECKRFSFIS KEEKSGKLLLKTCQPCQNLEVSNTTDKTALELPSVYLRDYMYLKLNNGIKVILISDAIDM EMGIGIQYPVSLIEGCNDLGGVRLISNVLIRGLKDYFREVALIKSYFLHNSRVSINFSTN ENILQILKYFSEVFVNFEISIEKFVEAYKLTIDQFKSRQDAQYTRIVGKLFEIAHPNSYF KNSCHTFNDQVLENEYAGYELVQLRKKIINAIRNNFSSNLLSVIITTPNALNCSQLLVSK GLSSMRNLNLSIPNTFDNEKYAIPFSTDNLIGKRLTFPSFFPIKQFFFCFFIEESLEANI KEIEGALAEMFIHGGNSLLSNLKNRGLVRNMDIKILLAESSPILSFRVEVEDTEKNNPAE ILSIIRQVVYTFTESPLLESYVMNYFKIHDVKFSKIFTTSSTNDVIFKLFNIINTSPLEE INNMINPKLLLESVETVLSYTTFDHFFLIKSCDFASEERTTKTVENEQI
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/753 Sequence name : 753 Sequence length : 529 VALUES OF COMPUTED PARAMETERS Coef20 : 4.244 CoefTot : 0.141 ChDiff : -12 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.547 1.282 0.074 0.609 MesoH : -0.330 0.531 -0.329 0.249 MuHd_075 : 30.236 15.654 6.598 6.635 MuHd_095 : 27.474 17.077 7.823 5.330 MuHd_100 : 34.635 22.085 9.140 6.998 MuHd_105 : 36.675 23.099 9.248 7.340 Hmax_075 : 6.300 10.150 -0.471 3.990 Hmax_095 : 11.300 14.900 1.565 4.980 Hmax_100 : 16.700 17.600 3.434 5.580 Hmax_105 : 9.800 12.200 0.861 4.200 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.4102 0.5898 DFMC : 0.3787 0.6213 This protein is probably imported in mitochondria. f(Ser) = 0.0000 f(Arg) = 0.0000 CMi = 0.00000 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 529 Chro.10431 MADIIFKSNESIRSLNSKNSNREDFIENDNMIDESALLVDLKQKEESFTEFECKRFSFISKEEKSGKLLLKTCQPCQNLE 80 VSNTTDKTALELPSVYLRDYMYLKLNNGIKVILISDAIDMEMGIGIQYPVSLIEGCNDLGGVRLISNVLIRGLKDYFREV 160 ALIKSYFLHNSRVSINFSTNENILQILKYFSEVFVNFEISIEKFVEAYKLTIDQFKSRQDAQYTRIVGKLFEIAHPNSYF 240 KNSCHTFNDQVLENEYAGYELVQLRKKIINAIRNNFSSNLLSVIITTPNALNCSQLLVSKGLSSMRNLNLSIPNTFDNEK 320 YAIPFSTDNLIGKRLTFPSFFPIKQFFFCFFIEESLEANIKEIEGALAEMFIHGGNSLLSNLKNRGLVRNMDIKILLAES 400 SPILSFRVEVEDTEKNNPAEILSIIRQVVYTFTESPLLESYVMNYFKIHDVKFSKIFTTSSTNDVIFKLFNIINTSPLEE 480 INNMINPKLLLESVETVLSYTTFDHFFLIKSCDFASEERTTKTVENEQI 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................. 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Chro.10431 7 MADIIFK|SN 0.080 . Chro.10431 13 KSNESIR|SL 0.168 . Chro.10431 18 IRSLNSK|NS 0.079 . Chro.10431 22 NSKNSNR|ED 0.097 . Chro.10431 42 ALLVDLK|QK 0.068 . Chro.10431 44 LVDLKQK|EE 0.061 . Chro.10431 54 FTEFECK|RF 0.066 . Chro.10431 55 TEFECKR|FS 0.186 . Chro.10431 61 RFSFISK|EE 0.063 . Chro.10431 64 FISKEEK|SG 0.078 . Chro.10431 67 KEEKSGK|LL 0.059 . Chro.10431 71 SGKLLLK|TC 0.067 . Chro.10431 87 VSNTTDK|TA 0.061 . Chro.10431 98 LPSVYLR|DY 0.113 . Chro.10431 104 RDYMYLK|LN 0.061 . Chro.10431 110 KLNNGIK|VI 0.063 . Chro.10431 143 NDLGGVR|LI 0.078 . Chro.10431 151 ISNVLIR|GL 0.153 . Chro.10431 154 VLIRGLK|DY 0.113 . Chro.10431 158 GLKDYFR|EV 0.100 . Chro.10431 164 REVALIK|SY 0.071 . Chro.10431 172 YFLHNSR|VS 0.062 . Chro.10431 188 NILQILK|YF 0.063 . Chro.10431 203 FEISIEK|FV 0.083 . Chro.10431 209 KFVEAYK|LT 0.065 . Chro.10431 216 LTIDQFK|SR 0.090 . Chro.10431 218 IDQFKSR|QD 0.108 . Chro.10431 225 QDAQYTR|IV 0.161 . Chro.10431 229 YTRIVGK|LF 0.077 . Chro.10431 241 HPNSYFK|NS 0.072 . Chro.10431 265 YELVQLR|KK 0.071 . Chro.10431 266 ELVQLRK|KI 0.081 . Chro.10431 267 LVQLRKK|II 0.122 . Chro.10431 273 KIINAIR|NN 0.082 . Chro.10431 300 SQLLVSK|GL 0.068 . Chro.10431 306 KGLSSMR|NL 0.087 . Chro.10431 320 NTFDNEK|YA 0.065 . Chro.10431 333 TDNLIGK|RL 0.059 . Chro.10431 334 DNLIGKR|LT 0.131 . Chro.10431 344 PSFFPIK|QF 0.068 . Chro.10431 361 SLEANIK|EI 0.081 . Chro.10431 383 SLLSNLK|NR 0.060 . Chro.10431 385 LSNLKNR|GL 0.122 . Chro.10431 389 KNRGLVR|NM 0.097 . Chro.10431 394 VRNMDIK|IL 0.066 . Chro.10431 407 SPILSFR|VE 0.077 . Chro.10431 415 EVEDTEK|NN 0.057 . Chro.10431 426 EILSIIR|QV 0.082 . Chro.10431 447 YVMNYFK|IH 0.064 . Chro.10431 452 FKIHDVK|FS 0.070 . Chro.10431 455 HDVKFSK|IF 0.066 . Chro.10431 468 TNDVIFK|LF 0.068 . Chro.10431 488 NNMINPK|LL 0.069 . Chro.10431 510 DHFFLIK|SC 0.071 . Chro.10431 519 DFASEER|TT 0.088 . Chro.10431 522 SEERTTK|TV 0.194 . ____________________________^_________________

  • Fasta :-

    >Chro.10431 ATGGCCGATATTATATTTAAGAGCAATGAATCGATTAGAAGTTTAAATTCGAAGAATTCA AATAGAGAAGATTTTATTGAAAATGATAACATGATAGATGAAAGTGCCTTGCTTGTTGAT TTGAAACAGAAAGAAGAATCTTTTACTGAATTCGAATGTAAGAGGTTCAGTTTTATTTCC AAAGAAGAGAAATCCGGAAAATTATTATTAAAAACTTGTCAACCATGTCAGAACTTGGAA GTGAGTAACACTACCGATAAGACTGCACTAGAATTACCCTCAGTTTATCTTAGGGACTAT ATGTATTTGAAACTTAATAATGGAATTAAAGTTATCTTAATTAGTGATGCGATAGATATG GAAATGGGAATAGGAATTCAATATCCAGTAAGCTTAATTGAAGGATGTAATGATCTTGGC GGAGTAAGACTTATTTCAAATGTTCTGATTAGAGGCCTTAAGGATTATTTCAGAGAGGTA GCACTTATTAAATCATATTTTTTACACAACTCAAGGGTTTCAATAAATTTTTCGACAAAT GAGAATATATTACAAATATTGAAATATTTTTCAGAAGTTTTTGTTAATTTTGAAATATCC ATTGAAAAATTTGTAGAAGCGTATAAATTAACAATTGATCAATTTAAATCAAGACAAGAT GCTCAATATACTCGAATAGTTGGCAAATTGTTTGAAATTGCTCATCCAAATAGTTATTTT AAGAACTCATGCCATACTTTTAATGACCAAGTACTAGAAAATGAATATGCTGGATATGAG CTTGTTCAACTTAGGAAGAAGATTATAAATGCTATTAGAAATAACTTTTCATCGAATCTA TTATCTGTAATAATTACAACCCCAAATGCTTTAAATTGTTCGCAATTATTAGTTTCAAAG GGTTTAAGTTCTATGAGAAATTTGAATCTGAGTATCCCAAACACATTTGATAATGAAAAA TATGCAATTCCTTTTTCTACAGATAATTTGATTGGTAAAAGGCTTACATTCCCAAGTTTT TTTCCTATAAAGCAATTTTTCTTTTGTTTCTTTATTGAAGAAAGTTTAGAGGCAAATATA AAAGAAATTGAAGGAGCTTTAGCAGAAATGTTCATTCATGGTGGAAACTCATTATTATCT AATTTAAAAAATAGAGGCTTGGTTAGAAATATGGACATTAAAATACTCTTGGCAGAAAGT TCCCCAATATTATCTTTTCGTGTAGAAGTTGAAGATACAGAAAAGAATAATCCAGCAGAG ATTTTAAGTATAATTCGTCAGGTAGTCTATACTTTTACAGAATCGCCCTTATTGGAGAGT TATGTTATGAATTATTTTAAAATTCACGATGTAAAGTTTTCAAAGATATTTACAACATCA TCAACAAATGATGTCATTTTTAAATTGTTTAATATTATTAATACATCTCCATTAGAAGAA ATTAATAACATGATTAATCCAAAACTACTTTTGGAATCAGTAGAAACAGTTCTGAGCTAT ACAACTTTTGACCACTTCTTCTTAATTAAAAGTTGTGATTTTGCTTCGGAGGAGCGAACG ACCAAAACAGTCGAGAATGAACAGATTTAA
  • Download Fasta

  • Fasta :-

    MADIIFKSNESIRSLNSKNSNREDFIENDNMIDESALLVDLKQKEESFTEFECKRFSFIS KEEKSGKLLLKTCQPCQNLEVSNTTDKTALELPSVYLRDYMYLKLNNGIKVILISDAIDM EMGIGIQYPVSLIEGCNDLGGVRLISNVLIRGLKDYFREVALIKSYFLHNSRVSINFSTN ENILQILKYFSEVFVNFEISIEKFVEAYKLTIDQFKSRQDAQYTRIVGKLFEIAHPNSYF KNSCHTFNDQVLENEYAGYELVQLRKKIINAIRNNFSSNLLSVIITTPNALNCSQLLVSK GLSSMRNLNLSIPNTFDNEKYAIPFSTDNLIGKRLTFPSFFPIKQFFFCFFIEESLEANI KEIEGALAEMFIHGGNSLLSNLKNRGLVRNMDIKILLAESSPILSFRVEVEDTEKNNPAE ILSIIRQVVYTFTESPLLESYVMNYFKIHDVKFSKIFTTSSTNDVIFKLFNIINTSPLEE INNMINPKLLLESVETVLSYTTFDHFFLIKSCDFASEERTTKTVENEQI

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
Chro.1043120 SNSKNSNRED0.992unspChro.1043147 SQKEESFTEF0.995unsp

Chro.10431      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India