Chro.20103 | involved in a-factor processing

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0003824      GO:0046872      

  • Computed_GO_Functions:  catalytic activity      metal ion binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
Chro.20103OTHER0.9998860.0000970.000016
No Results

  • Fasta :-

    >Chro.20103 MINNSQELVQKVDDIVLPECEDRKYRALELKNGLTAFLVSDKETKTSGCCLTVYIGAMYS PKNLNGLAHFLEHMLFCGTKKYPNVDEYQKFIASHGGKRQGSTTRSTTTYYFEIKNNAFN EALDRFSSFFTEPLFCKDMTEKEVSAIENEFHLKYHSDERVRFHLLGQLSNKSHPLNCFT TGNKETLEVKPKKLGINLHSELLKFYSSYYSSNIMSVVLYGKEDLDILEKYTIEYFSKIP NHQVNCFDYTKIFMEIPPYTRETSNRKIIKLIPYETDKRLKIYFPLPPLDKYYDSCAPAY IANIIGHKGEGGISSILRAKKLATGASFAITNEDPCALAQFGVVLTDEGYNNIGQVLEII FNFLVLFKATPVIPELVGEFIGITRAGFTYQPKFSIRDLFSLPAKYLKYKCKFEEILSSG FLVKKFSQDDVFSILEYLNNDNFFVLLSSQAIEEEYKKNQENFIVEHYYGTKYSISELDE DLLSIINSSSPEKALKLGLILPKPNQFVSTDFSIVNPQKVCVNDYSRIPELLNFDELKAQ GNTDSYNIHSHPLNIWFKPDSTFNSPHSLINMRLIAERILEFKENSSFEKLSNFSNKLVF QVFGEILNEVMYRSMHELSSDILAASLSYTINFNSRTNVFVLQGFGLSHKLNYLISIMFE KLYHGTEVRKYYDEAILIISKDWKNKIIKPNLTSFSLECISESLSPFFFNRQEKLNVLES FTFELFCSIRQHFLSNCRLEGLIMGNFSEPNAKCISIQHWKNLINFQNSVKNEVKSSGIR VEQFSIVNLEKDIYTLNYIPNSSDKNGCWMLSFFLGEYNLRKQVLCDLILPFVSSEAFAD LRTNQQLAYVVRATQIFSSPAIIIGYYLQSSEYTNALTLERLLEFHINKTKVELKSKLNK EMFIKLKDSTIQTLSSNPKSIFDEYKTYLHEINERSYLFDIRQRKIDILNNVQYNEFIDF YDSIWTSNSVLTEIRSQIDDTKNSGMGSEYKDPSIPEGYLKLESITQISRNKNTPTISLE DKLKNL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/906 Sequence name : 906 Sequence length : 1026 VALUES OF COMPUTED PARAMETERS Coef20 : 3.341 CoefTot : -0.311 ChDiff : -8 ZoneTo : 6 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.924 1.782 0.141 0.645 MesoH : -0.064 0.719 -0.218 0.373 MuHd_075 : 9.449 11.490 1.802 2.824 MuHd_095 : 36.216 27.875 10.832 6.877 MuHd_100 : 41.336 31.342 12.506 7.929 MuHd_105 : 40.665 29.928 12.481 7.904 Hmax_075 : 0.900 13.500 -0.771 4.280 Hmax_095 : 10.300 16.188 1.287 4.690 Hmax_100 : 17.700 22.000 3.774 6.260 Hmax_105 : 18.200 24.600 4.650 7.020 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8830 0.1170 DFMC : 0.9623 0.0377
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 1026 Chro.20103 MINNSQELVQKVDDIVLPECEDRKYRALELKNGLTAFLVSDKETKTSGCCLTVYIGAMYSPKNLNGLAHFLEHMLFCGTK 80 KYPNVDEYQKFIASHGGKRQGSTTRSTTTYYFEIKNNAFNEALDRFSSFFTEPLFCKDMTEKEVSAIENEFHLKYHSDER 160 VRFHLLGQLSNKSHPLNCFTTGNKETLEVKPKKLGINLHSELLKFYSSYYSSNIMSVVLYGKEDLDILEKYTIEYFSKIP 240 NHQVNCFDYTKIFMEIPPYTRETSNRKIIKLIPYETDKRLKIYFPLPPLDKYYDSCAPAYIANIIGHKGEGGISSILRAK 320 KLATGASFAITNEDPCALAQFGVVLTDEGYNNIGQVLEIIFNFLVLFKATPVIPELVGEFIGITRAGFTYQPKFSIRDLF 400 SLPAKYLKYKCKFEEILSSGFLVKKFSQDDVFSILEYLNNDNFFVLLSSQAIEEEYKKNQENFIVEHYYGTKYSISELDE 480 DLLSIINSSSPEKALKLGLILPKPNQFVSTDFSIVNPQKVCVNDYSRIPELLNFDELKAQGNTDSYNIHSHPLNIWFKPD 560 STFNSPHSLINMRLIAERILEFKENSSFEKLSNFSNKLVFQVFGEILNEVMYRSMHELSSDILAASLSYTINFNSRTNVF 640 VLQGFGLSHKLNYLISIMFEKLYHGTEVRKYYDEAILIISKDWKNKIIKPNLTSFSLECISESLSPFFFNRQEKLNVLES 720 FTFELFCSIRQHFLSNCRLEGLIMGNFSEPNAKCISIQHWKNLINFQNSVKNEVKSSGIRVEQFSIVNLEKDIYTLNYIP 800 NSSDKNGCWMLSFFLGEYNLRKQVLCDLILPFVSSEAFADLRTNQQLAYVVRATQIFSSPAIIIGYYLQSSEYTNALTLE 880 RLLEFHINKTKVELKSKLNKEMFIKLKDSTIQTLSSNPKSIFDEYKTYLHEINERSYLFDIRQRKIDILNNVQYNEFIDF 960 YDSIWTSNSVLTEIRSQIDDTKNSGMGSEYKDPSIPEGYLKLESITQISRNKNTPTISLEDKLKNL 1040 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ................................................................................ 960 .................................................................. 1040 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Chro.20103 11 SQELVQK|VD 0.069 . Chro.20103 23 LPECEDR|KY 0.089 . Chro.20103 24 PECEDRK|YR 0.072 . Chro.20103 26 CEDRKYR|AL 0.280 . Chro.20103 31 YRALELK|NG 0.064 . Chro.20103 42 AFLVSDK|ET 0.063 . Chro.20103 45 VSDKETK|TS 0.068 . Chro.20103 62 GAMYSPK|NL 0.069 . Chro.20103 80 MLFCGTK|KY 0.061 . Chro.20103 81 LFCGTKK|YP 0.101 . Chro.20103 90 NVDEYQK|FI 0.061 . Chro.20103 98 IASHGGK|RQ 0.074 . Chro.20103 99 ASHGGKR|QG 0.205 . Chro.20103 105 RQGSTTR|ST 0.165 . Chro.20103 115 TYYFEIK|NN 0.061 . Chro.20103 125 FNEALDR|FS 0.085 . Chro.20103 137 TEPLFCK|DM 0.078 . Chro.20103 142 CKDMTEK|EV 0.101 . Chro.20103 154 ENEFHLK|YH 0.080 . Chro.20103 160 KYHSDER|VR 0.083 . Chro.20103 162 HSDERVR|FH 0.083 . Chro.20103 172 LGQLSNK|SH 0.070 . Chro.20103 184 CFTTGNK|ET 0.053 . Chro.20103 190 KETLEVK|PK 0.058 . Chro.20103 192 TLEVKPK|KL 0.101 . Chro.20103 193 LEVKPKK|LG 0.084 . Chro.20103 204 LHSELLK|FY 0.083 . Chro.20103 222 SVVLYGK|ED 0.059 . Chro.20103 230 DLDILEK|YT 0.062 . Chro.20103 238 TIEYFSK|IP 0.069 . Chro.20103 251 NCFDYTK|IF 0.061 . Chro.20103 261 EIPPYTR|ET 0.068 . Chro.20103 266 TRETSNR|KI 0.165 . Chro.20103 267 RETSNRK|II 0.069 . Chro.20103 270 SNRKIIK|LI 0.069 . Chro.20103 278 IPYETDK|RL 0.062 . Chro.20103 279 PYETDKR|LK 0.085 . Chro.20103 281 ETDKRLK|IY 0.062 . Chro.20103 291 PLPPLDK|YY 0.061 . Chro.20103 308 ANIIGHK|GE 0.064 . Chro.20103 318 GISSILR|AK 0.099 . Chro.20103 320 SSILRAK|KL 0.070 . Chro.20103 321 SILRAKK|LA 0.288 . Chro.20103 368 NFLVLFK|AT 0.060 . Chro.20103 385 EFIGITR|AG 0.081 . Chro.20103 393 GFTYQPK|FS 0.069 . Chro.20103 397 QPKFSIR|DL 0.123 . Chro.20103 405 LFSLPAK|YL 0.075 . Chro.20103 408 LPAKYLK|YK 0.079 . Chro.20103 410 AKYLKYK|CK 0.076 . Chro.20103 412 YLKYKCK|FE 0.081 . Chro.20103 424 SSGFLVK|KF 0.070 . Chro.20103 425 SGFLVKK|FS 0.109 . Chro.20103 457 AIEEEYK|KN 0.059 . Chro.20103 458 IEEEYKK|NQ 0.083 . Chro.20103 472 EHYYGTK|YS 0.066 . Chro.20103 493 NSSSPEK|AL 0.071 . Chro.20103 496 SPEKALK|LG 0.056 . Chro.20103 503 LGLILPK|PN 0.062 . Chro.20103 519 SIVNPQK|VC 0.056 . Chro.20103 527 CVNDYSR|IP 0.072 . Chro.20103 538 LNFDELK|AQ 0.066 . Chro.20103 558 PLNIWFK|PD 0.070 . Chro.20103 573 HSLINMR|LI 0.085 . Chro.20103 578 MRLIAER|IL 0.121 . Chro.20103 583 ERILEFK|EN 0.071 . Chro.20103 590 ENSSFEK|LS 0.067 . Chro.20103 597 LSNFSNK|LV 0.146 . Chro.20103 613 LNEVMYR|SM 0.132 . Chro.20103 636 TINFNSR|TN 0.101 . Chro.20103 650 GFGLSHK|LN 0.059 . Chro.20103 661 ISIMFEK|LY 0.069 . Chro.20103 669 YHGTEVR|KY 0.081 . Chro.20103 670 HGTEVRK|YY 0.095 . Chro.20103 681 AILIISK|DW 0.058 . Chro.20103 684 IISKDWK|NK 0.072 . Chro.20103 686 SKDWKNK|II 0.087 . Chro.20103 689 WKNKIIK|PN 0.069 . Chro.20103 711 SPFFFNR|QE 0.086 . Chro.20103 714 FFNRQEK|LN 0.110 . Chro.20103 730 ELFCSIR|QH 0.076 . Chro.20103 738 HFLSNCR|LE 0.073 . Chro.20103 753 FSEPNAK|CI 0.074 . Chro.20103 761 ISIQHWK|NL 0.071 . Chro.20103 771 NFQNSVK|NE 0.056 . Chro.20103 775 SVKNEVK|SS 0.095 . Chro.20103 780 VKSSGIR|VE 0.074 . Chro.20103 791 SIVNLEK|DI 0.072 . Chro.20103 805 IPNSSDK|NG 0.073 . Chro.20103 821 LGEYNLR|KQ 0.063 . Chro.20103 822 GEYNLRK|QV 0.093 . Chro.20103 842 EAFADLR|TN 0.071 . Chro.20103 852 QLAYVVR|AT 0.092 . Chro.20103 881 NALTLER|LL 0.075 . Chro.20103 889 LEFHINK|TK 0.054 . Chro.20103 891 FHINKTK|VE 0.056 . Chro.20103 895 KTKVELK|SK 0.081 . Chro.20103 897 KVELKSK|LN 0.059 . Chro.20103 900 LKSKLNK|EM 0.082 . Chro.20103 905 NKEMFIK|LK 0.065 . Chro.20103 907 EMFIKLK|DS 0.076 . Chro.20103 919 TLSSNPK|SI 0.140 . Chro.20103 926 SIFDEYK|TY 0.067 . Chro.20103 935 LHEINER|SY 0.098 . Chro.20103 942 SYLFDIR|QR 0.070 . Chro.20103 944 LFDIRQR|KI 0.082 . Chro.20103 945 FDIRQRK|ID 0.153 . Chro.20103 975 SVLTEIR|SQ 0.100 . Chro.20103 982 SQIDDTK|NS 0.068 . Chro.20103 991 GMGSEYK|DP 0.077 . Chro.20103 1001 IPEGYLK|LE 0.064 . Chro.20103 1010 SITQISR|NK 0.066 . Chro.20103 1012 TQISRNK|NT 0.060 . Chro.20103 1022 TISLEDK|LK 0.067 . Chro.20103 1024 SLEDKLK|NL 0.070 . ____________________________^_________________

  • Fasta :-

    >Chro.20103 ATGATTAATAATTCACAGGAACTGGTTCAAAAAGTGGATGACATAGTACTTCCAGAATGT GAAGATAGAAAGTACAGAGCTTTAGAGCTTAAGAACGGTCTAACAGCCTTTTTAGTATCA GATAAAGAAACTAAAACAAGTGGATGCTGCCTTACAGTCTACATTGGAGCTATGTACTCT CCTAAAAATTTAAATGGATTGGCACACTTTTTAGAACATATGTTATTCTGTGGAACAAAA AAATATCCGAACGTGGATGAATATCAAAAATTTATTGCAAGCCATGGAGGAAAGAGGCAG GGATCTACTACAAGATCAACTACAACATATTACTTTGAAATAAAAAATAATGCTTTTAAT GAAGCATTGGATAGATTTTCTTCATTCTTTACAGAACCATTGTTTTGCAAGGATATGACA GAAAAAGAGGTTTCTGCCATTGAAAATGAGTTCCATCTTAAATATCACAGTGATGAAAGA GTTAGATTTCATTTACTTGGTCAATTGTCAAACAAATCACATCCTTTGAATTGTTTTACT ACCGGGAATAAAGAAACTTTGGAAGTCAAACCTAAAAAATTGGGAATCAATCTCCATTCT GAACTTTTAAAGTTCTACTCTTCCTATTACAGCAGTAATATTATGTCAGTTGTTCTTTAT GGAAAAGAAGATCTAGACATATTGGAAAAGTATACTATTGAATATTTTTCAAAAATTCCA AATCACCAAGTTAATTGTTTTGATTATACAAAGATTTTCATGGAAATTCCTCCTTATACA AGAGAAACTTCAAATAGAAAAATTATTAAGTTAATACCTTATGAAACTGACAAAAGATTA AAAATCTACTTCCCACTTCCTCCTTTAGACAAATATTACGATAGCTGTGCTCCTGCTTAT ATTGCAAACATTATTGGACATAAAGGTGAGGGAGGAATATCATCAATATTAAGAGCTAAA AAGCTTGCTACTGGTGCTTCTTTTGCTATTACTAATGAAGATCCATGTGCACTAGCTCAG TTTGGGGTTGTCCTAACTGATGAGGGATATAATAATATTGGACAAGTATTGGAAATCATT TTCAACTTTTTAGTATTATTTAAGGCAACACCTGTTATTCCAGAACTAGTTGGTGAGTTT ATTGGGATTACTAGAGCAGGTTTTACTTATCAACCCAAATTCTCAATTCGTGATTTATTC TCATTACCAGCAAAGTATCTCAAATACAAATGTAAATTTGAAGAAATCCTCTCTTCTGGT TTTCTTGTGAAAAAATTCTCACAAGATGATGTATTTTCTATTTTGGAATACTTAAATAAT GACAATTTTTTTGTCTTACTATCTTCGCAAGCAATTGAGGAAGAGTATAAGAAAAATCAA GAAAACTTTATTGTTGAACATTATTATGGAACAAAATATAGTATTTCAGAACTAGATGAA GATTTGCTTTCAATAATTAACTCCTCCTCACCAGAAAAGGCTTTAAAACTTGGGTTAATT TTGCCAAAACCGAATCAATTTGTGTCAACAGATTTCTCAATAGTAAACCCACAAAAGGTT TGTGTTAATGATTACTCGAGAATTCCTGAACTTCTAAATTTTGATGAATTGAAAGCTCAA GGTAATACCGATTCTTACAATATTCATTCTCATCCTTTAAATATTTGGTTTAAACCAGAT TCAACCTTTAATTCTCCTCATTCATTAATCAATATGAGATTAATTGCTGAGAGAATTCTG GAATTTAAAGAAAACTCATCTTTTGAGAAATTGTCAAATTTTTCAAATAAGTTAGTTTTC CAAGTATTTGGTGAAATTTTAAATGAAGTTATGTATAGAAGTATGCATGAGCTCTCTTCA GATATATTAGCAGCAAGTTTATCTTATACAATTAATTTCAATTCTAGAACAAATGTATTT GTTTTACAAGGATTTGGACTTTCTCACAAATTAAATTATTTGATTTCAATAATGTTCGAG AAATTATATCATGGAACAGAGGTTAGAAAATATTATGATGAAGCCATATTAATTATAAGC AAAGATTGGAAGAATAAGATAATAAAACCAAATTTGACTTCATTTTCACTAGAATGTATC TCAGAATCTTTGTCTCCTTTTTTCTTCAATCGTCAAGAAAAATTAAATGTTTTGGAATCA TTTACTTTTGAATTGTTTTGTTCTATAAGACAACACTTTTTATCAAACTGTAGACTTGAA GGGTTAATTATGGGGAATTTTTCAGAGCCAAATGCAAAGTGTATTTCAATACAACATTGG AAAAATTTGATAAATTTCCAGAATTCTGTTAAAAATGAAGTAAAATCTTCTGGAATAAGA GTAGAACAATTTTCAATTGTTAATTTAGAAAAGGACATTTATACTTTAAATTATATTCCA AATAGTTCTGACAAAAATGGATGCTGGATGTTGAGTTTCTTCCTTGGAGAGTATAATTTA AGGAAACAAGTCCTATGTGATTTGATTTTACCCTTTGTCTCAAGTGAAGCTTTTGCTGAT CTCAGAACTAATCAACAATTAGCTTACGTTGTTAGAGCTACACAGATATTTTCTTCTCCT GCAATTATTATTGGATACTATTTACAATCATCTGAGTATACCAATGCTCTAACTCTTGAG AGGCTTTTAGAGTTTCATATAAACAAAACAAAAGTGGAACTAAAAAGTAAATTGAATAAG GAAATGTTTATAAAATTGAAGGATTCCACAATTCAAACCCTTTCATCAAATCCAAAAAGT ATCTTTGATGAGTATAAGACTTATCTTCATGAGATTAATGAAAGATCATATTTATTTGAT ATAAGACAAAGGAAAATAGATATATTAAATAATGTACAATACAATGAATTTATTGATTTT TATGATAGTATATGGACTTCAAACTCCGTATTAACAGAAATAAGATCTCAAATAGATGAT ACTAAGAATTCTGGTATGGGTTCTGAGTATAAAGATCCGTCTATTCCAGAAGGATATTTA AAATTGGAGTCAATTACTCAGATTTCAAGGAACAAAAATACACCCACGATTTCGCTGGAA GATAAACTAAAGAATTTGTAA
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  • Fasta :-

    MINNSQELVQKVDDIVLPECEDRKYRALELKNGLTAFLVSDKETKTSGCCLTVYIGAMYS PKNLNGLAHFLEHMLFCGTKKYPNVDEYQKFIASHGGKRQGSTTRSTTTYYFEIKNNAFN EALDRFSSFFTEPLFCKDMTEKEVSAIENEFHLKYHSDERVRFHLLGQLSNKSHPLNCFT TGNKETLEVKPKKLGINLHSELLKFYSSYYSSNIMSVVLYGKEDLDILEKYTIEYFSKIP NHQVNCFDYTKIFMEIPPYTRETSNRKIIKLIPYETDKRLKIYFPLPPLDKYYDSCAPAY IANIIGHKGEGGISSILRAKKLATGASFAITNEDPCALAQFGVVLTDEGYNNIGQVLEII FNFLVLFKATPVIPELVGEFIGITRAGFTYQPKFSIRDLFSLPAKYLKYKCKFEEILSSG FLVKKFSQDDVFSILEYLNNDNFFVLLSSQAIEEEYKKNQENFIVEHYYGTKYSISELDE DLLSIINSSSPEKALKLGLILPKPNQFVSTDFSIVNPQKVCVNDYSRIPELLNFDELKAQ GNTDSYNIHSHPLNIWFKPDSTFNSPHSLINMRLIAERILEFKENSSFEKLSNFSNKLVF QVFGEILNEVMYRSMHELSSDILAASLSYTINFNSRTNVFVLQGFGLSHKLNYLISIMFE KLYHGTEVRKYYDEAILIISKDWKNKIIKPNLTSFSLECISESLSPFFFNRQEKLNVLES FTFELFCSIRQHFLSNCRLEGLIMGNFSEPNAKCISIQHWKNLINFQNSVKNEVKSSGIR VEQFSIVNLEKDIYTLNYIPNSSDKNGCWMLSFFLGEYNLRKQVLCDLILPFVSSEAFAD LRTNQQLAYVVRATQIFSSPAIIIGYYLQSSEYTNALTLERLLEFHINKTKVELKSKLNK EMFIKLKDSTIQTLSSNPKSIFDEYKTYLHEINERSYLFDIRQRKIDILNNVQYNEFIDF YDSIWTSNSVLTEIRSQIDDTKNSGMGSEYKDPSIPEGYLKLESITQISRNKNTPTISLE DKLKNL

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
Chro.20103145 SEKEVSAIEN0.996unspChro.20103145 SEKEVSAIEN0.996unspChro.20103145 SEKEVSAIEN0.996unspChro.20103395 SQPKFSIRDL0.996unspChro.20103490 SINSSSPEKA0.993unspChro.20103769 SNFQNSVKNE0.995unspChro.20103920 SSNPKSIFDE0.993unspChro.2010340 SAFLVSDKET0.997unspChro.20103102 SKRQGSTTRS0.996unsp

Chro.20103      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India