Chro.20263 | methionine aminopeptidase, type II

_IDPredictionOTHERSPmTPCS_Position
Chro.20263OTHER0.9999950.0000000.000005
No Results

  • Fasta :-

    >Chro.20263 MSENEYNEKDNQNNGKELGTKTEQKTQLLLEESGVLNLDKPLNEIESIDNKQNNKKKKKK KKKKGKENLYEDKDDTYDPDLPTYSIPIQDNTHLRKVCNWPAIEFSKQTSPPTVPINKIY SRHEFPEGEIIEYNGSNSYRISSEELKDKEKLHILDYASLRRAAEVHRQVRKYMQSIIRP EMKLIDMCNILESKVKDLVAAEGLKCGWGFPTGCSLNHCAAHYTPNPHDFTKLTQDDICK LDFGVQVNGMIIDCAFTVAFNDVFDPLIQSTLDATNTGLKVAGIDVMFSEIGSAIEEVIK SYEFEYKSKVYNIKPIKNLNGHSILPYHIHGGKSVPIIATNDDTRMEENEIYAIETFATT GRGYVTEGPDCSHYMKYYDNPFLNENSTRLNSAKILLGGINTHFGTLAFCRRWLDQLGFN KHALALKSLVDSEIIRPYPPLNDIPGSFSSQMEHTILLRPSCKEVVSRGDDF
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/781 Sequence name : 781 Sequence length : 472 VALUES OF COMPUTED PARAMETERS Coef20 : 2.349 CoefTot : 0.112 ChDiff : -9 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.888 1.365 0.092 0.532 MesoH : -0.455 0.514 -0.316 0.279 MuHd_075 : 14.258 6.035 4.452 1.961 MuHd_095 : 11.406 5.058 4.031 2.654 MuHd_100 : 15.330 7.133 3.442 2.839 MuHd_105 : 19.708 10.049 4.516 3.418 Hmax_075 : -21.583 -12.017 -7.960 -1.213 Hmax_095 : -23.600 -13.475 -9.023 -1.872 Hmax_100 : -14.700 -8.700 -7.313 -0.860 Hmax_105 : -17.675 -10.675 -8.291 -1.435 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9956 0.0044 DFMC : 0.9863 0.0137
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 472 Chro.20263 MSENEYNEKDNQNNGKELGTKTEQKTQLLLEESGVLNLDKPLNEIESIDNKQNNKKKKKKKKKKGKENLYEDKDDTYDPD 80 LPTYSIPIQDNTHLRKVCNWPAIEFSKQTSPPTVPINKIYSRHEFPEGEIIEYNGSNSYRISSEELKDKEKLHILDYASL 160 RRAAEVHRQVRKYMQSIIRPEMKLIDMCNILESKVKDLVAAEGLKCGWGFPTGCSLNHCAAHYTPNPHDFTKLTQDDICK 240 LDFGVQVNGMIIDCAFTVAFNDVFDPLIQSTLDATNTGLKVAGIDVMFSEIGSAIEEVIKSYEFEYKSKVYNIKPIKNLN 320 GHSILPYHIHGGKSVPIIATNDDTRMEENEIYAIETFATTGRGYVTEGPDCSHYMKYYDNPFLNENSTRLNSAKILLGGI 400 NTHFGTLAFCRRWLDQLGFNKHALALKSLVDSEIIRPYPPLNDIPGSFSSQMEHTILLRPSCKEVVSRGDDF 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ........................................................................ 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Chro.20263 9 ENEYNEK|DN 0.069 . Chro.20263 16 DNQNNGK|EL 0.092 . Chro.20263 21 GKELGTK|TE 0.058 . Chro.20263 25 GTKTEQK|TQ 0.059 . Chro.20263 40 GVLNLDK|PL 0.070 . Chro.20263 51 IESIDNK|QN 0.066 . Chro.20263 55 DNKQNNK|KK 0.057 . Chro.20263 56 NKQNNKK|KK 0.100 . Chro.20263 57 KQNNKKK|KK 0.142 . Chro.20263 58 QNNKKKK|KK 0.168 . Chro.20263 59 NNKKKKK|KK 0.138 . Chro.20263 60 NKKKKKK|KK 0.152 . Chro.20263 61 KKKKKKK|KK 0.173 . Chro.20263 62 KKKKKKK|KK 0.209 . Chro.20263 63 KKKKKKK|KG 0.122 . Chro.20263 64 KKKKKKK|GK 0.174 . Chro.20263 66 KKKKKGK|EN 0.072 . Chro.20263 73 ENLYEDK|DD 0.063 . Chro.20263 95 QDNTHLR|KV 0.141 . Chro.20263 96 DNTHLRK|VC 0.066 . Chro.20263 107 PAIEFSK|QT 0.069 . Chro.20263 118 PTVPINK|IY 0.066 . Chro.20263 122 INKIYSR|HE 0.100 . Chro.20263 140 NGSNSYR|IS 0.167 . Chro.20263 147 ISSEELK|DK 0.077 . Chro.20263 149 SEELKDK|EK 0.070 . Chro.20263 151 ELKDKEK|LH 0.056 . Chro.20263 161 LDYASLR|RA 0.103 . Chro.20263 162 DYASLRR|AA 0.163 . Chro.20263 168 RAAEVHR|QV 0.169 . Chro.20263 171 EVHRQVR|KY 0.326 . Chro.20263 172 VHRQVRK|YM 0.101 . Chro.20263 179 YMQSIIR|PE 0.089 . Chro.20263 183 IIRPEMK|LI 0.074 . Chro.20263 194 CNILESK|VK 0.055 . Chro.20263 196 ILESKVK|DL 0.087 . Chro.20263 205 VAAEGLK|CG 0.055 . Chro.20263 232 NPHDFTK|LT 0.074 . Chro.20263 240 TQDDICK|LD 0.065 . Chro.20263 280 ATNTGLK|VA 0.066 . Chro.20263 300 AIEEVIK|SY 0.077 . Chro.20263 307 SYEFEYK|SK 0.075 . Chro.20263 309 EFEYKSK|VY 0.060 . Chro.20263 314 SKVYNIK|PI 0.072 . Chro.20263 317 YNIKPIK|NL 0.059 . Chro.20263 333 YHIHGGK|SV 0.089 . Chro.20263 345 ATNDDTR|ME 0.095 . Chro.20263 362 TFATTGR|GY 0.112 . Chro.20263 376 DCSHYMK|YY 0.080 . Chro.20263 389 LNENSTR|LN 0.112 . Chro.20263 394 TRLNSAK|IL 0.101 . Chro.20263 411 GTLAFCR|RW 0.092 . Chro.20263 412 TLAFCRR|WL 0.239 . Chro.20263 421 DQLGFNK|HA 0.063 . Chro.20263 427 KHALALK|SL 0.087 . Chro.20263 436 VDSEIIR|PY 0.084 . Chro.20263 459 EHTILLR|PS 0.075 . Chro.20263 463 LLRPSCK|EV 0.082 . Chro.20263 468 CKEVVSR|GD 0.111 . ____________________________^_________________

  • Fasta :-

    >Chro.20263 ATGAGTGAAAATGAATATAATGAAAAAGATAATCAAAATAATGGAAAAGAATTGGGAACT AAAACTGAACAAAAAACTCAGCTTCTACTCGAAGAATCAGGTGTTTTAAATCTTGATAAA CCTCTAAATGAAATAGAATCTATTGACAATAAACAGAATAATAAAAAGAAAAAAAAGAAA AAGAAAAAAAAAGGAAAGGAGAACCTATACGAAGATAAAGATGATACCTATGATCCAGAT CTTCCTACTTATTCAATTCCTATACAAGATAACACTCATCTGAGAAAAGTTTGCAACTGG CCAGCTATTGAATTTAGCAAACAAACATCTCCTCCAACTGTGCCTATAAATAAAATTTAC TCAAGACATGAATTTCCAGAGGGCGAAATAATTGAATATAATGGGTCTAACTCATATAGA ATATCGTCTGAAGAATTAAAAGATAAAGAAAAACTCCATATTTTGGACTACGCCTCTTTA AGAAGAGCAGCAGAGGTACATAGACAAGTTCGAAAATATATGCAGAGTATCATTCGACCA GAGATGAAACTTATAGATATGTGCAATATTTTAGAGAGTAAAGTGAAAGACTTAGTTGCT GCAGAAGGGCTCAAGTGTGGATGGGGATTTCCAACAGGATGTTCGCTTAATCATTGTGCA GCGCACTATACTCCAAACCCCCATGACTTTACAAAATTAACCCAAGATGACATTTGTAAA TTAGACTTTGGTGTACAGGTTAATGGAATGATAATTGACTGTGCTTTTACCGTTGCATTC AATGATGTTTTTGACCCTTTAATTCAATCTACTTTAGATGCAACAAATACAGGATTAAAA GTTGCCGGAATTGATGTTATGTTTTCTGAAATAGGCTCAGCCATAGAAGAAGTCATTAAA TCTTATGAATTTGAGTACAAAAGTAAAGTTTATAATATTAAACCTATTAAGAATCTAAAT GGTCATTCAATTCTACCATATCATATCCATGGAGGGAAATCAGTACCAATTATTGCAACA AATGATGACACAAGAATGGAGGAAAATGAAATATATGCCATCGAAACATTTGCAACCACT GGAAGAGGCTACGTTACAGAAGGGCCAGATTGTAGCCACTATATGAAATACTACGACAAT CCCTTCCTAAACGAAAATTCAACCAGACTTAATTCTGCTAAAATTCTTCTTGGTGGAATT AATACCCATTTCGGTACACTTGCGTTCTGTAGAAGATGGTTGGACCAATTAGGATTTAAT AAGCATGCACTAGCTCTTAAATCATTAGTAGACTCGGAAATCATTCGGCCATATCCTCCA TTAAACGACATTCCGGGTTCATTCTCCTCTCAAATGGAACACACCATTTTATTAAGGCCT TCTTGTAAAGAGGTTGTATCCAGAGGTGATGACTTTTAA
  • Download Fasta

  • Fasta :-

    MSENEYNEKDNQNNGKELGTKTEQKTQLLLEESGVLNLDKPLNEIESIDNKQNNKKKKKK KKKKGKENLYEDKDDTYDPDLPTYSIPIQDNTHLRKVCNWPAIEFSKQTSPPTVPINKIY SRHEFPEGEIIEYNGSNSYRISSEELKDKEKLHILDYASLRRAAEVHRQVRKYMQSIIRP EMKLIDMCNILESKVKDLVAAEGLKCGWGFPTGCSLNHCAAHYTPNPHDFTKLTQDDICK LDFGVQVNGMIIDCAFTVAFNDVFDPLIQSTLDATNTGLKVAGIDVMFSEIGSAIEEVIK SYEFEYKSKVYNIKPIKNLNGHSILPYHIHGGKSVPIIATNDDTRMEENEIYAIETFATT GRGYVTEGPDCSHYMKYYDNPFLNENSTRLNSAKILLGGINTHFGTLAFCRRWLDQLGFN KHALALKSLVDSEIIRPYPPLNDIPGSFSSQMEHTILLRPSCKEVVSRGDDF

  • title: active site
  • coordinates: H222,D242,D253,H322,E355,E453
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
Chro.20263142 SSYRISSEEL0.994unspChro.20263461 SLLRPSCKEV0.997unsp

Chro.20263      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India