Chro.20292 | hypothetical protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0003824      GO:0046872      

  • Computed_GO_Functions:  catalytic activity      metal ion binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
Chro.20292OTHER0.9998930.0000490.000059
No Results

  • Fasta :-

    >Chro.20292 MAANGNDLELITSILSKNPLIHRPDIVFGKLSDGLDYCIFNSESQRNSFHLNLVLNTGSI HEEEFEKGFANFVQQLILTELNKELLRIRTEHLTNITSSTDFHCTIFNIYNEVENTKLND SELRATFFDVLEIFLLTIYKFREKLSSSSDIFSDRIEEIKNKTFDIIEKSDKSVANYIEK QIFLQFHRDTLLPKRWPIGEKSSIENITVTGLLKFINKWYLPNNMCLFIVGDIPASNELL ANHLSSFVSGIKSLNLEKRASGINLYETSSSHNIFSVKERIGHKTINNALNIIEKYTGSD FQREVVIQHPSIDQVSISIGVKLEICPLVDEGEIFMNAVDTIISNAIHTKLLNSLSQLAC DEELTSISWDFYNSSRENCGWNTFSIVSDEKNWRAVFRLGIQQIVSICNTKMSMEEFEEI VLITISDYKKSAEEELGDDPKLVLDGLIDDWLCGSIPLSKKQEYQLFCKVVDRINPEIIQ CRCKALFSHIIYYFDENDHYNKESSFTGCIFVSKPLHNSFQNSEIDPENSINTSNNICKA PESESEFIKSLLEEYKACVYKDLELSVESAKSYSNEVFFEKNSYKIERMSESFEFGIWDA LKASTYITIDKIFDSIRTNFNSLVGDLVNSDESIEHLNGKYSIKELDSLAERIKFNSNNF QNDSYEQGSHSLPNDICDLGL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/833 Sequence name : 833 Sequence length : 681 VALUES OF COMPUTED PARAMETERS Coef20 : 3.738 CoefTot : -0.236 ChDiff : -37 ZoneTo : 6 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.553 1.435 0.017 0.567 MesoH : -0.478 0.381 -0.377 0.230 MuHd_075 : 19.372 13.347 5.701 4.451 MuHd_095 : 12.811 11.306 4.165 3.088 MuHd_100 : 17.324 10.712 4.331 3.394 MuHd_105 : 17.726 11.451 4.319 3.911 Hmax_075 : 9.683 11.783 0.613 4.643 Hmax_095 : 9.100 11.400 0.163 3.940 Hmax_100 : 9.500 9.400 0.442 3.890 Hmax_105 : 4.600 7.000 -0.716 3.150 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9537 0.0463 DFMC : 0.9646 0.0354
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 681 Chro.20292 MAANGNDLELITSILSKNPLIHRPDIVFGKLSDGLDYCIFNSESQRNSFHLNLVLNTGSIHEEEFEKGFANFVQQLILTE 80 LNKELLRIRTEHLTNITSSTDFHCTIFNIYNEVENTKLNDSELRATFFDVLEIFLLTIYKFREKLSSSSDIFSDRIEEIK 160 NKTFDIIEKSDKSVANYIEKQIFLQFHRDTLLPKRWPIGEKSSIENITVTGLLKFINKWYLPNNMCLFIVGDIPASNELL 240 ANHLSSFVSGIKSLNLEKRASGINLYETSSSHNIFSVKERIGHKTINNALNIIEKYTGSDFQREVVIQHPSIDQVSISIG 320 VKLEICPLVDEGEIFMNAVDTIISNAIHTKLLNSLSQLACDEELTSISWDFYNSSRENCGWNTFSIVSDEKNWRAVFRLG 400 IQQIVSICNTKMSMEEFEEIVLITISDYKKSAEEELGDDPKLVLDGLIDDWLCGSIPLSKKQEYQLFCKVVDRINPEIIQ 480 CRCKALFSHIIYYFDENDHYNKESSFTGCIFVSKPLHNSFQNSEIDPENSINTSNNICKAPESESEFIKSLLEEYKACVY 560 KDLELSVESAKSYSNEVFFEKNSYKIERMSESFEFGIWDALKASTYITIDKIFDSIRTNFNSLVGDLVNSDESIEHLNGK 640 YSIKELDSLAERIKFNSNNFQNDSYEQGSHSLPNDICDLGL 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ......................................... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Chro.20292 17 ITSILSK|NP 0.067 . Chro.20292 23 KNPLIHR|PD 0.075 . Chro.20292 30 PDIVFGK|LS 0.065 . Chro.20292 46 FNSESQR|NS 0.099 . Chro.20292 67 HEEEFEK|GF 0.064 . Chro.20292 83 ILTELNK|EL 0.060 . Chro.20292 87 LNKELLR|IR 0.075 . Chro.20292 89 KELLRIR|TE 0.067 . Chro.20292 117 NEVENTK|LN 0.065 . Chro.20292 124 LNDSELR|AT 0.080 . Chro.20292 140 FLLTIYK|FR 0.059 . Chro.20292 142 LTIYKFR|EK 0.077 . Chro.20292 144 IYKFREK|LS 0.059 . Chro.20292 155 SDIFSDR|IE 0.110 . Chro.20292 160 DRIEEIK|NK 0.060 . Chro.20292 162 IEEIKNK|TF 0.076 . Chro.20292 169 TFDIIEK|SD 0.071 . Chro.20292 172 IIEKSDK|SV 0.103 . Chro.20292 180 VANYIEK|QI 0.071 . Chro.20292 188 IFLQFHR|DT 0.075 . Chro.20292 194 RDTLLPK|RW 0.068 . Chro.20292 195 DTLLPKR|WP 0.119 . Chro.20292 201 RWPIGEK|SS 0.078 . Chro.20292 214 TVTGLLK|FI 0.060 . Chro.20292 218 LLKFINK|WY 0.063 . Chro.20292 252 SFVSGIK|SL 0.068 . Chro.20292 258 KSLNLEK|RA 0.065 . Chro.20292 259 SLNLEKR|AS 0.342 . Chro.20292 278 HNIFSVK|ER 0.062 . Chro.20292 280 IFSVKER|IG 0.132 . Chro.20292 284 KERIGHK|TI 0.070 . Chro.20292 295 ALNIIEK|YT 0.079 . Chro.20292 303 TGSDFQR|EV 0.212 . Chro.20292 322 SISIGVK|LE 0.059 . Chro.20292 350 SNAIHTK|LL 0.066 . Chro.20292 376 DFYNSSR|EN 0.079 . Chro.20292 391 SIVSDEK|NW 0.065 . Chro.20292 394 SDEKNWR|AV 0.146 . Chro.20292 398 NWRAVFR|LG 0.130 . Chro.20292 411 VSICNTK|MS 0.066 . Chro.20292 429 ITISDYK|KS 0.059 . Chro.20292 430 TISDYKK|SA 0.318 . Chro.20292 441 ELGDDPK|LV 0.079 . Chro.20292 460 GSIPLSK|KQ 0.065 . Chro.20292 461 SIPLSKK|QE 0.088 . Chro.20292 469 EYQLFCK|VV 0.077 . Chro.20292 473 FCKVVDR|IN 0.088 . Chro.20292 482 PEIIQCR|CK 0.074 . Chro.20292 484 IIQCRCK|AL 0.070 . Chro.20292 502 ENDHYNK|ES 0.062 . Chro.20292 514 GCIFVSK|PL 0.071 . Chro.20292 539 TSNNICK|AP 0.074 . Chro.20292 549 SESEFIK|SL 0.097 . Chro.20292 556 SLLEEYK|AC 0.059 . Chro.20292 561 YKACVYK|DL 0.096 . Chro.20292 571 LSVESAK|SY 0.099 . Chro.20292 581 NEVFFEK|NS 0.075 . Chro.20292 585 FEKNSYK|IE 0.066 . Chro.20292 588 NSYKIER|MS 0.134 . Chro.20292 602 GIWDALK|AS 0.063 . Chro.20292 611 TYITIDK|IF 0.069 . Chro.20292 617 KIFDSIR|TN 0.094 . Chro.20292 640 IEHLNGK|YS 0.087 . Chro.20292 644 NGKYSIK|EL 0.066 . Chro.20292 652 LDSLAER|IK 0.083 . Chro.20292 654 SLAERIK|FN 0.075 . ____________________________^_________________

  • Fasta :-

    >Chro.20292 ATGGCAGCTAATGGGAATGATTTAGAGCTTATCACAAGCATTCTATCTAAGAATCCATTA ATTCATAGGCCAGACATTGTATTTGGAAAATTGAGTGACGGCCTAGATTATTGTATATTT AACAGTGAATCGCAAAGAAACAGTTTCCACTTGAATCTTGTCTTAAATACGGGCAGTATT CATGAAGAAGAGTTTGAAAAGGGATTTGCGAATTTTGTCCAACAATTGATTTTAACCGAA TTAAATAAAGAGCTGTTGAGAATCCGTACAGAGCATTTAACAAACATAACATCATCAACT GATTTTCATTGTACAATTTTCAATATATACAATGAAGTTGAAAATACCAAGCTTAACGAC TCAGAACTTAGAGCAACTTTCTTTGATGTATTAGAAATTTTTTTGCTAACTATTTACAAA TTCCGGGAGAAACTATCTTCGTCCTCAGATATATTTTCAGACAGAATAGAAGAAATAAAA AATAAAACATTTGATATCATTGAAAAATCTGATAAATCTGTAGCAAACTATATCGAAAAG CAAATTTTTTTGCAATTTCATAGAGATACTCTATTACCTAAGAGATGGCCAATAGGAGAA AAGTCGAGTATTGAAAATATCACAGTAACAGGTTTATTAAAGTTTATTAATAAATGGTAT CTTCCGAATAATATGTGTCTGTTTATTGTAGGAGACATTCCTGCTTCTAATGAACTTTTG GCAAACCACTTATCTAGTTTTGTTTCTGGAATTAAAAGTTTAAATCTTGAAAAACGAGCC TCTGGTATTAATTTATATGAAACTTCTAGCTCCCACAATATTTTTTCTGTGAAAGAGCGT ATTGGACACAAAACTATAAATAACGCACTAAATATTATCGAAAAATACACAGGTTCAGAT TTTCAAAGGGAAGTTGTCATTCAGCATCCAAGTATTGATCAGGTCTCAATTTCTATTGGA GTAAAACTAGAGATTTGCCCATTAGTAGATGAAGGTGAGATTTTTATGAATGCAGTTGAC ACAATAATATCTAACGCTATACATACAAAATTACTGAATTCACTATCTCAATTGGCATGC GATGAAGAATTAACATCTATATCTTGGGACTTTTACAATTCGTCTCGTGAAAATTGTGGT TGGAATACATTTTCAATTGTTAGCGATGAAAAGAACTGGAGAGCAGTTTTTAGATTAGGC ATTCAACAGATTGTATCTATATGCAATACAAAAATGTCTATGGAGGAGTTTGAAGAGATA GTATTAATTACTATCTCTGACTACAAAAAATCGGCAGAAGAAGAATTAGGAGATGACCCA AAATTAGTTCTTGATGGTTTGATTGATGATTGGCTTTGCGGAAGTATTCCATTGAGTAAA AAGCAAGAATATCAACTATTTTGTAAAGTTGTAGACCGGATCAATCCCGAAATTATACAA TGCAGGTGCAAAGCTTTATTTAGCCATATTATTTACTACTTTGACGAAAATGATCATTAT AATAAAGAATCTTCCTTTACAGGATGTATTTTTGTGAGTAAGCCATTACATAATTCTTTT CAGAATTCAGAAATTGATCCAGAAAACTCTATAAATACTTCGAATAACATCTGCAAAGCT CCAGAATCAGAGTCAGAATTTATCAAGTCACTACTTGAGGAATATAAGGCATGTGTTTAT AAAGATCTTGAATTATCTGTTGAATCAGCTAAAAGTTATTCAAATGAAGTTTTTTTTGAG AAAAATAGCTACAAAATTGAGAGAATGTCAGAAAGCTTTGAATTTGGAATTTGGGATGCG CTCAAGGCATCTACATATATTACTATAGATAAGATTTTTGACTCTATAAGAACTAACTTT AATTCGCTTGTTGGCGACTTAGTAAATTCGGACGAAAGCATTGAACATTTGAATGGCAAA TATTCCATAAAAGAGCTTGATTCACTTGCTGAAAGAATCAAATTTAATTCAAATAATTTT CAAAATGATTCATACGAGCAAGGAAGCCATAGCTTACCAAATGACATTTGCGACTTAGGT CTTTAA
  • Download Fasta

  • Fasta :-

    MAANGNDLELITSILSKNPLIHRPDIVFGKLSDGLDYCIFNSESQRNSFHLNLVLNTGSI HEEEFEKGFANFVQQLILTELNKELLRIRTEHLTNITSSTDFHCTIFNIYNEVENTKLND SELRATFFDVLEIFLLTIYKFREKLSSSSDIFSDRIEEIKNKTFDIIEKSDKSVANYIEK QIFLQFHRDTLLPKRWPIGEKSSIENITVTGLLKFINKWYLPNNMCLFIVGDIPASNELL ANHLSSFVSGIKSLNLEKRASGINLYETSSSHNIFSVKERIGHKTINNALNIIEKYTGSD FQREVVIQHPSIDQVSISIGVKLEICPLVDEGEIFMNAVDTIISNAIHTKLLNSLSQLAC DEELTSISWDFYNSSRENCGWNTFSIVSDEKNWRAVFRLGIQQIVSICNTKMSMEEFEEI VLITISDYKKSAEEELGDDPKLVLDGLIDDWLCGSIPLSKKQEYQLFCKVVDRINPEIIQ CRCKALFSHIIYYFDENDHYNKESSFTGCIFVSKPLHNSFQNSEIDPENSINTSNNICKA PESESEFIKSLLEEYKACVYKDLELSVESAKSYSNEVFFEKNSYKIERMSESFEFGIWDA LKASTYITIDKIFDSIRTNFNSLVGDLVNSDESIEHLNGKYSIKELDSLAERIKFNSNNF QNDSYEQGSHSLPNDICDLGL

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
Chro.20292431 SDYKKSAEEE0.991unspChro.20292431 SDYKKSAEEE0.991unspChro.20292431 SDYKKSAEEE0.991unspChro.20292523 SSFQNSEIDP0.993unspChro.20292566 SDLELSVESA0.991unspChro.20292590 SIERMSESFE0.995unspChro.20292642 SNGKYSIKEL0.995unspChro.20292147 SEKLSSSSDI0.997unspChro.20292413 SNTKMSMEEF0.996unsp

Chro.20292      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India