Chro.30129 | hypothetical protein

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_IDPredictionOTHERSPmTPCS_Position
Chro.30129OTHER0.8895060.0056970.104797
No Results

  • Fasta :-

    >Chro.30129 MILITWGNPSSAIDHWGHIGGFVSGTCLGIICNFKSDLKPKWYKAAFGVSIALISSTLIG PIIRIWAFELAPCVVFPEKLMNP
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/841 Sequence name : 841 Sequence length : 83 VALUES OF COMPUTED PARAMETERS Coef20 : 3.374 CoefTot : -2.356 ChDiff : 2 ZoneTo : 68 KR : 5 DE : 2 CleavSite : 66 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.988 1.965 0.409 0.742 MesoH : 0.338 0.785 -0.121 0.406 MuHd_075 : 18.587 18.071 5.919 5.581 MuHd_095 : 21.425 20.823 7.039 6.789 MuHd_100 : 19.360 20.084 7.343 6.159 MuHd_105 : 23.091 19.044 7.354 6.158 Hmax_075 : 12.017 24.900 5.609 5.215 Hmax_095 : 18.200 22.600 6.027 7.639 Hmax_100 : 17.700 21.500 4.021 7.330 Hmax_105 : 14.600 14.583 4.062 6.260 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9084 0.0916 DFMC : 0.9060 0.0940
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 83 Chro.30129 MILITWGNPSSAIDHWGHIGGFVSGTCLGIICNFKSDLKPKWYKAAFGVSIALISSTLIGPIIRIWAFELAPCVVFPEKL 80 MNP 160 ................................................................................ 80 ... 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Chro.30129 35 GIICNFK|SD 0.065 . Chro.30129 39 NFKSDLK|PK 0.053 . Chro.30129 41 KSDLKPK|WY 0.085 . Chro.30129 44 LKPKWYK|AA 0.077 . Chro.30129 64 LIGPIIR|IW 0.077 . Chro.30129 79 CVVFPEK|LM 0.062 . ____________________________^_________________

  • Fasta :-

    >Chro.30129 ATGATTTTGATTACTTGGGGCAACCCATCATCGGCTATTGATCACTGGGGTCATATTGGA GGATTCGTTTCTGGTACTTGTCTTGGAATTATATGCAATTTTAAGTCAGATTTAAAGCCA AAATGGTATAAGGCTGCTTTTGGAGTTTCTATTGCTTTAATTTCATCCACTTTGATTGGT CCTATCATCAGAATATGGGCGTTTGAACTTGCTCCTTGTGTAGTTTTTCCAGAGAAACTT ATGAATCCTTGA
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  • Fasta :-

    MILITWGNPSSAIDHWGHIGGFVSGTCLGIICNFKSDLKPKWYKAAFGVSIALISSTLIG PIIRIWAFELAPCVVFPEKLMNP

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Chro.30129      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India