Chro.30470 | hypothetical protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0003824      GO:0046872      

  • Computed_GO_Functions:  catalytic activity      metal ion binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
Chro.30470SP0.0590160.9388930.002091CS pos: 23-24. ISS-YI. Pr: 0.6043
No Results

  • Fasta :-

    >Chro.30470 MFRLISLISVACLFLLNENLISSYIGSKSKSHYSHSLLELEKVSGENGFETFKYRDVYLN EDVLISRKSFNNGFTLFNIQQPFESSYSDFRITFNSGSSSDPIHLPGIRYFALFIFSKQV NVCMSKVFSEETHANFKIKIDATRSTLIFTFLTEQTNKFFDCFLNTIKNQSYLENSSYFV EILQASEEFEKILDDPSSIEVDKLMIRMIYGNLPSFGCESLQISSIFSESCFKSSIKLNV ELPKYSRQIVNSIFKPHAMSAIFIGKLNNSSLIKGLSSLTKGKLRKTDDLDCNKINKANM AIKNLTSNIILRNGFHTNILRLYIPFETYDLESLASNGQAFILSILNSRHRSGILNFIFM NRFANNVNSYYYSEYTTTILYLEVNLTEKGLQNIPIIIESIVSYLTLIKRTVSSDKLFSE AQNLFNYHLTKSTVILSEAIENYLSSHFIMSKSSSNILNSNINTQFTRANVEYFISKMNL NSITVTLYVPDQLDHLSLFKKNEKSGIFPVETIEPHTNTRVFIFKMADIFPNKLSSLSTK YAVDTFGLQLPNNDLISNISLPFFHSAPIFEKLLHLHKSLDIHYKYLKELGSETIISRTM AYKSITTSGIWFSSNGLFSKSVNLELKFSLRKWSPLLEKFNGEVSSFLILATIHILTAIL NIKLSETLYYTNRLKSNIAFIPAQSFSDMISDPFEIFLVVNAPIDYFTLIMNDVLNTILS FDSYLTEEIVIRAKKAARNTLLRLYEGYTQFEKDLKIVTQIVSSQHCSFLRLGTSLKNDF DIELIRIVYSSLFTSPSIYGLIQGNLTPFHANHILNVFIQGLGHEFFSMEINEENSLNFF NKEVHNNDKNDSNDYAPILEINTSILDISTIPNEYKSMYTHKLDFTADASYSTVVLLIGK LTVPSFIKATAIKEALSNEISSRISSDKKIDFASSLSIVANNFVVVSLSIRSVEFLAGTL NRILDKELNQSISKVLKSHKSKSYVNKILENMNFVDNVFETKFLLSKISILNLVGGTREY LDKMELSDISDLLSDIETVPRIMIATQKVTNLKASKTSLDFIPSGYKDIRSDYKCLLEHP NTVFN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/486 Sequence name : 486 Sequence length : 1085 VALUES OF COMPUTED PARAMETERS Coef20 : 4.842 CoefTot : 0.491 ChDiff : 0 ZoneTo : 38 KR : 3 DE : 1 CleavSite : 13 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.982 2.212 0.321 0.746 MesoH : 0.069 0.807 -0.227 0.368 MuHd_075 : 27.201 25.486 9.658 7.039 MuHd_095 : 24.644 16.990 7.914 5.089 MuHd_100 : 26.498 16.978 8.343 5.378 MuHd_105 : 18.737 12.752 6.176 4.964 Hmax_075 : 18.900 13.388 4.758 7.840 Hmax_095 : 20.000 22.662 5.753 6.396 Hmax_100 : 20.000 24.800 5.753 7.030 Hmax_105 : 18.700 21.100 5.302 6.310 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7048 0.2952 DFMC : 0.7369 0.2631
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 1085 Chro.30470 MFRLISLISVACLFLLNENLISSYIGSKSKSHYSHSLLELEKVSGENGFETFKYRDVYLNEDVLISRKSFNNGFTLFNIQ 80 QPFESSYSDFRITFNSGSSSDPIHLPGIRYFALFIFSKQVNVCMSKVFSEETHANFKIKIDATRSTLIFTFLTEQTNKFF 160 DCFLNTIKNQSYLENSSYFVEILQASEEFEKILDDPSSIEVDKLMIRMIYGNLPSFGCESLQISSIFSESCFKSSIKLNV 240 ELPKYSRQIVNSIFKPHAMSAIFIGKLNNSSLIKGLSSLTKGKLRKTDDLDCNKINKANMAIKNLTSNIILRNGFHTNIL 320 RLYIPFETYDLESLASNGQAFILSILNSRHRSGILNFIFMNRFANNVNSYYYSEYTTTILYLEVNLTEKGLQNIPIIIES 400 IVSYLTLIKRTVSSDKLFSEAQNLFNYHLTKSTVILSEAIENYLSSHFIMSKSSSNILNSNINTQFTRANVEYFISKMNL 480 NSITVTLYVPDQLDHLSLFKKNEKSGIFPVETIEPHTNTRVFIFKMADIFPNKLSSLSTKYAVDTFGLQLPNNDLISNIS 560 LPFFHSAPIFEKLLHLHKSLDIHYKYLKELGSETIISRTMAYKSITTSGIWFSSNGLFSKSVNLELKFSLRKWSPLLEKF 640 NGEVSSFLILATIHILTAILNIKLSETLYYTNRLKSNIAFIPAQSFSDMISDPFEIFLVVNAPIDYFTLIMNDVLNTILS 720 FDSYLTEEIVIRAKKAARNTLLRLYEGYTQFEKDLKIVTQIVSSQHCSFLRLGTSLKNDFDIELIRIVYSSLFTSPSIYG 800 LIQGNLTPFHANHILNVFIQGLGHEFFSMEINEENSLNFFNKEVHNNDKNDSNDYAPILEINTSILDISTIPNEYKSMYT 880 HKLDFTADASYSTVVLLIGKLTVPSFIKATAIKEALSNEISSRISSDKKIDFASSLSIVANNFVVVSLSIRSVEFLAGTL 960 NRILDKELNQSISKVLKSHKSKSYVNKILENMNFVDNVFETKFLLSKISILNLVGGTREYLDKMELSDISDLLSDIETVP 1040 RIMIATQKVTNLKASKTSLDFIPSGYKDIRSDYKCLLEHPNTVFN 1120 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ................................................................................ 960 ................................................................................ 1040 ............................................. 1120 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Chro.30470 3 ----MFR|LI 0.085 . Chro.30470 28 SSYIGSK|SK 0.085 . Chro.30470 30 YIGSKSK|SH 0.069 . Chro.30470 42 SLLELEK|VS 0.063 . Chro.30470 53 NGFETFK|YR 0.062 . Chro.30470 55 FETFKYR|DV 0.179 . Chro.30470 67 EDVLISR|KS 0.077 . Chro.30470 68 DVLISRK|SF 0.098 . Chro.30470 91 SSYSDFR|IT 0.103 . Chro.30470 109 IHLPGIR|YF 0.072 . Chro.30470 118 ALFIFSK|QV 0.076 . Chro.30470 126 VNVCMSK|VF 0.062 . Chro.30470 137 ETHANFK|IK 0.066 . Chro.30470 139 HANFKIK|ID 0.072 . Chro.30470 144 IKIDATR|ST 0.118 . Chro.30470 158 LTEQTNK|FF 0.074 . Chro.30470 168 CFLNTIK|NQ 0.061 . Chro.30470 191 ASEEFEK|IL 0.061 . Chro.30470 203 SSIEVDK|LM 0.065 . Chro.30470 207 VDKLMIR|MI 0.098 . Chro.30470 233 FSESCFK|SS 0.069 . Chro.30470 237 CFKSSIK|LN 0.056 . Chro.30470 244 LNVELPK|YS 0.086 . Chro.30470 247 ELPKYSR|QI 0.076 . Chro.30470 255 IVNSIFK|PH 0.057 . Chro.30470 266 SAIFIGK|LN 0.064 . Chro.30470 274 NNSSLIK|GL 0.077 . Chro.30470 281 GLSSLTK|GK 0.079 . Chro.30470 283 SSLTKGK|LR 0.058 . Chro.30470 285 LTKGKLR|KT 0.096 . Chro.30470 286 TKGKLRK|TD 0.079 . Chro.30470 294 DDLDCNK|IN 0.056 . Chro.30470 297 DCNKINK|AN 0.070 . Chro.30470 303 KANMAIK|NL 0.066 . Chro.30470 312 TSNIILR|NG 0.086 . Chro.30470 321 FHTNILR|LY 0.075 . Chro.30470 349 LSILNSR|HR 0.098 . Chro.30470 351 ILNSRHR|SG 0.110 . Chro.30470 362 NFIFMNR|FA 0.105 . Chro.30470 389 EVNLTEK|GL 0.064 . Chro.30470 409 SYLTLIK|RT 0.054 . Chro.30470 410 YLTLIKR|TV 0.151 . Chro.30470 416 RTVSSDK|LF 0.074 . Chro.30470 431 FNYHLTK|ST 0.076 . Chro.30470 452 SHFIMSK|SS 0.094 . Chro.30470 468 INTQFTR|AN 0.088 . Chro.30470 477 VEYFISK|MN 0.061 . Chro.30470 500 DHLSLFK|KN 0.061 . Chro.30470 501 HLSLFKK|NE 0.114 . Chro.30470 504 LFKKNEK|SG 0.066 . Chro.30470 520 EPHTNTR|VF 0.086 . Chro.30470 525 TRVFIFK|MA 0.090 . Chro.30470 533 ADIFPNK|LS 0.061 . Chro.30470 540 LSSLSTK|YA 0.099 . Chro.30470 572 SAPIFEK|LL 0.060 . Chro.30470 578 KLLHLHK|SL 0.081 . Chro.30470 585 SLDIHYK|YL 0.077 . Chro.30470 588 IHYKYLK|EL 0.066 . Chro.30470 598 SETIISR|TM 0.068 . Chro.30470 603 SRTMAYK|SI 0.129 . Chro.30470 620 SNGLFSK|SV 0.117 . Chro.30470 627 SVNLELK|FS 0.060 . Chro.30470 631 ELKFSLR|KW 0.101 . Chro.30470 632 LKFSLRK|WS 0.068 . Chro.30470 639 WSPLLEK|FN 0.068 . Chro.30470 663 TAILNIK|LS 0.061 . Chro.30470 673 TLYYTNR|LK 0.094 . Chro.30470 675 YYTNRLK|SN 0.073 . Chro.30470 732 TEEIVIR|AK 0.115 . Chro.30470 734 EIVIRAK|KA 0.061 . Chro.30470 735 IVIRAKK|AA 0.323 . Chro.30470 738 RAKKAAR|NT 0.081 . Chro.30470 743 ARNTLLR|LY 0.105 . Chro.30470 753 GYTQFEK|DL 0.065 . Chro.30470 756 QFEKDLK|IV 0.077 . Chro.30470 771 QHCSFLR|LG 0.075 . Chro.30470 777 RLGTSLK|ND 0.068 . Chro.30470 786 FDIELIR|IV 0.120 . Chro.30470 842 SLNFFNK|EV 0.108 . Chro.30470 849 EVHNNDK|ND 0.060 . Chro.30470 876 TIPNEYK|SM 0.083 . Chro.30470 882 KSMYTHK|LD 0.075 . Chro.30470 900 VVLLIGK|LT 0.054 . Chro.30470 908 TVPSFIK|AT 0.068 . Chro.30470 913 IKATAIK|EA 0.073 . Chro.30470 923 SNEISSR|IS 0.121 . Chro.30470 928 SRISSDK|KI 0.075 . Chro.30470 929 RISSDKK|ID 0.103 . Chro.30470 951 VVSLSIR|SV 0.215 . Chro.30470 962 LAGTLNR|IL 0.145 . Chro.30470 966 LNRILDK|EL 0.072 . Chro.30470 974 LNQSISK|VL 0.056 . Chro.30470 977 SISKVLK|SH 0.082 . Chro.30470 980 KVLKSHK|SK 0.085 . Chro.30470 982 LKSHKSK|SY 0.112 . Chro.30470 987 SKSYVNK|IL 0.099 . Chro.30470 1002 DNVFETK|FL 0.065 . Chro.30470 1007 TKFLLSK|IS 0.062 . Chro.30470 1018 NLVGGTR|EY 0.077 . Chro.30470 1023 TREYLDK|ME 0.064 . Chro.30470 1041 DIETVPR|IM 0.084 . Chro.30470 1048 IMIATQK|VT 0.057 . Chro.30470 1053 QKVTNLK|AS 0.068 . Chro.30470 1056 TNLKASK|TS 0.062 . Chro.30470 1067 FIPSGYK|DI 0.059 . Chro.30470 1070 SGYKDIR|SD 0.146 . Chro.30470 1074 DIRSDYK|CL 0.068 . ____________________________^_________________

  • Fasta :-

    >Chro.30470 ATGTTTCGACTAATTAGTTTAATTTCAGTCGCATGCTTGTTTTTATTAAATGAAAATTTA ATTAGCAGTTATATTGGTTCAAAGAGTAAGTCACATTATTCCCATTCTTTATTAGAGTTA GAAAAAGTTAGTGGCGAGAATGGCTTTGAAACTTTTAAATACAGAGATGTTTATCTTAAT GAAGATGTTTTAATCTCAAGAAAGTCATTCAATAATGGCTTTACTTTGTTTAACATTCAG CAGCCATTTGAAAGTTCTTATTCTGATTTTAGAATAACTTTTAATAGTGGAAGTTCCTCC GATCCAATACATTTACCTGGTATTAGATATTTTGCTCTATTTATATTCAGCAAACAAGTG AATGTTTGTATGAGCAAGGTTTTTAGCGAGGAAACTCATGCTAATTTTAAAATTAAGATA GATGCAACCAGATCTACTTTGATATTCACATTTTTAACTGAACAAACAAATAAGTTCTTT GACTGTTTTCTAAATACTATTAAAAACCAATCGTATTTAGAAAATAGTTCTTATTTTGTC GAAATTCTACAAGCTTCAGAAGAATTTGAAAAAATTCTTGATGATCCAAGTTCAATTGAG GTTGACAAGCTTATGATTAGAATGATTTACGGTAATCTACCATCATTTGGCTGCGAATCT TTACAAATTTCAAGCATTTTCTCGGAATCCTGTTTCAAGAGTTCTATTAAATTGAATGTC GAATTACCAAAATACTCAAGACAAATTGTTAATAGTATCTTCAAGCCTCATGCCATGTCC GCAATATTCATTGGTAAATTAAATAATTCAAGTCTCATTAAAGGGCTTTCTTCATTGACA AAAGGTAAGCTCAGAAAGACAGATGATTTAGATTGTAATAAAATCAATAAAGCCAACATG GCTATCAAAAACTTGACAAGTAATATTATTTTAAGAAATGGCTTCCATACGAATATATTG AGGCTTTATATACCATTTGAAACTTATGATTTGGAATCACTTGCATCAAATGGACAAGCT TTTATATTAAGTATCCTCAATTCCAGACATAGAAGTGGTATTTTAAACTTTATTTTTATG AATAGATTTGCTAATAATGTAAATAGTTACTACTATTCTGAATATACCACCACTATTTTG TATTTGGAAGTGAATCTGACTGAAAAAGGATTACAAAATATTCCAATTATAATTGAATCC ATAGTTTCTTACCTCACTTTAATAAAGAGAACTGTTTCTAGCGACAAGCTTTTCTCTGAA GCACAGAATTTATTCAATTATCACCTCACCAAGTCAACAGTAATTTTATCGGAGGCTATA GAGAACTATTTAAGTTCGCATTTCATTATGTCCAAATCTTCATCCAACATTCTCAATTCA AATATTAACACTCAGTTTACACGCGCAAATGTTGAGTATTTCATTTCAAAAATGAACTTG AATTCTATTACAGTTACTCTTTATGTTCCTGATCAATTGGATCATTTGTCACTCTTCAAA AAAAATGAAAAGTCTGGAATATTCCCAGTTGAAACAATTGAGCCTCACACGAATACTAGA GTTTTTATATTTAAAATGGCTGATATTTTTCCCAATAAACTATCTTCCTTAAGTACAAAA TATGCAGTTGATACATTTGGTCTACAATTACCAAACAATGATTTAATCAGCAATATTTCT TTACCATTTTTCCACTCAGCGCCTATTTTTGAAAAGTTACTTCATCTACACAAGTCGTTA GATATCCACTACAAATATCTTAAGGAATTGGGCAGTGAGACCATAATATCTCGTACAATG GCATATAAATCGATTACCACATCTGGAATATGGTTCTCCAGTAATGGATTATTTAGCAAG AGCGTTAATCTTGAGCTGAAATTTAGTTTACGTAAATGGAGTCCTTTATTAGAAAAGTTT AATGGTGAAGTTTCATCTTTTTTAATTCTGGCTACAATTCACATTTTGACTGCAATTCTA AACATTAAGCTGAGTGAAACTTTATACTATACAAATAGATTGAAATCAAATATAGCCTTT ATTCCAGCTCAATCATTTAGCGATATGATTTCAGATCCATTTGAAATATTTCTAGTTGTA AATGCACCAATCGACTATTTTACTTTGATCATGAATGACGTTTTAAATACTATTTTATCC TTTGATAGCTACTTAACAGAGGAAATAGTTATTCGCGCGAAGAAAGCTGCTAGAAATACT TTATTGAGACTGTATGAAGGTTATACACAATTCGAAAAGGATCTAAAAATTGTTACTCAA ATAGTTTCTTCCCAGCATTGTTCATTTTTAAGACTTGGTACCTCTCTTAAGAATGATTTT GATATTGAGCTTATCCGAATAGTATACTCTTCTTTATTCACATCTCCATCTATTTATGGC CTTATTCAAGGTAACCTCACTCCTTTCCATGCCAATCACATTTTGAATGTGTTTATTCAA GGTCTTGGCCATGAGTTCTTCTCAATGGAAATTAACGAAGAAAACAGTTTAAATTTCTTT AACAAAGAAGTTCACAATAATGATAAGAATGATTCCAATGATTATGCTCCAATATTAGAA ATCAATACATCTATTTTGGATATTTCCACTATTCCAAATGAATATAAAAGTATGTATACT CATAAGCTAGACTTTACTGCTGATGCTTCTTACTCAACAGTTGTATTACTTATTGGTAAA TTAACGGTTCCGAGCTTTATTAAGGCAACTGCTATCAAAGAAGCTTTGTCCAATGAAATT TCATCTAGAATTTCGTCAGACAAAAAAATTGATTTCGCTTCTTCTTTATCAATTGTTGCG AATAATTTTGTTGTGGTGTCACTAAGCATCAGGAGTGTTGAATTTTTGGCAGGAACATTA AATAGAATTCTAGACAAGGAATTAAATCAATCCATTTCCAAGGTTCTTAAAAGCCATAAA TCCAAGAGTTATGTTAATAAAATCTTAGAGAATATGAATTTTGTAGATAATGTCTTTGAA ACAAAGTTTCTTTTATCAAAAATTAGTATTTTGAATCTTGTTGGTGGTACTAGAGAATAC TTGGATAAAATGGAGTTATCCGACATCTCTGATTTGTTATCTGATATAGAAACTGTTCCG CGTATTATGATTGCCACTCAAAAAGTAACTAATTTGAAGGCTTCCAAGACTTCTCTGGAC TTCATTCCAAGTGGTTATAAAGATATTAGAAGCGACTACAAATGTCTTCTTGAACATCCA AATACAGTTTTCAATTGA
  • Download Fasta

  • Fasta :-

    MFRLISLISVACLFLLNENLISSYIGSKSKSHYSHSLLELEKVSGENGFETFKYRDVYLN EDVLISRKSFNNGFTLFNIQQPFESSYSDFRITFNSGSSSDPIHLPGIRYFALFIFSKQV NVCMSKVFSEETHANFKIKIDATRSTLIFTFLTEQTNKFFDCFLNTIKNQSYLENSSYFV EILQASEEFEKILDDPSSIEVDKLMIRMIYGNLPSFGCESLQISSIFSESCFKSSIKLNV ELPKYSRQIVNSIFKPHAMSAIFIGKLNNSSLIKGLSSLTKGKLRKTDDLDCNKINKANM AIKNLTSNIILRNGFHTNILRLYIPFETYDLESLASNGQAFILSILNSRHRSGILNFIFM NRFANNVNSYYYSEYTTTILYLEVNLTEKGLQNIPIIIESIVSYLTLIKRTVSSDKLFSE AQNLFNYHLTKSTVILSEAIENYLSSHFIMSKSSSNILNSNINTQFTRANVEYFISKMNL NSITVTLYVPDQLDHLSLFKKNEKSGIFPVETIEPHTNTRVFIFKMADIFPNKLSSLSTK YAVDTFGLQLPNNDLISNISLPFFHSAPIFEKLLHLHKSLDIHYKYLKELGSETIISRTM AYKSITTSGIWFSSNGLFSKSVNLELKFSLRKWSPLLEKFNGEVSSFLILATIHILTAIL NIKLSETLYYTNRLKSNIAFIPAQSFSDMISDPFEIFLVVNAPIDYFTLIMNDVLNTILS FDSYLTEEIVIRAKKAARNTLLRLYEGYTQFEKDLKIVTQIVSSQHCSFLRLGTSLKNDF DIELIRIVYSSLFTSPSIYGLIQGNLTPFHANHILNVFIQGLGHEFFSMEINEENSLNFF NKEVHNNDKNDSNDYAPILEINTSILDISTIPNEYKSMYTHKLDFTADASYSTVVLLIGK LTVPSFIKATAIKEALSNEISSRISSDKKIDFASSLSIVANNFVVVSLSIRSVEFLAGTL NRILDKELNQSISKVLKSHKSKSYVNKILENMNFVDNVFETKFLLSKISILNLVGGTREY LDKMELSDISDLLSDIETVPRIMIATQKVTNLKASKTSLDFIPSGYKDIRSDYKCLLEHP NTVFN

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
Chro.30470538 SLSSLSTKYA0.99unspChro.30470538 SLSSLSTKYA0.99unspChro.30470538 SLSSLSTKYA0.99unspChro.30470926 SSRISSDKKI0.996unspChro.30470978 SKVLKSHKSK0.992unspChro.304701034 SSDLLSDIET0.995unspChro.3047031 SSKSKSHYSH0.994unspChro.3047044 SLEKVSGENG0.991unsp

Chro.30470      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India