Chro.30478 | hypothetical protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0003824      GO:0046872      

  • Computed_GO_Functions:  catalytic activity      metal ion binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
Chro.30478OTHER0.9998820.0001090.000009
No Results

  • Fasta :-

    >Chro.30478 MEINPQNMIIIFNLKGDKETIEDTGELTLFDQSILNKDCAKYEEFLSQNKKFRFVILTNV LSKEFKGVIKTKNKFRFILEEQNFCLKKYISHFPESLTQELKIYNKDKDPKTKYNLEKYN IVERLVVPKKLRDLLSSDSSQRATNFPQFQDFYYFIPHKVPTHKIYLAMNFFFPFENKKM ASIRSTRIATILLFIKEILLSFSESVSSHLANYSVDFIPKIYLPYDSIVNAFGLSLSLGS APNAFSQFLSNLSINLNSYIDLDEKTFHEFVSYLRKVQVEKSKSPNFIEKVNQINLNHLI STETILNELQTLKVEEVREVFQTMIRQSQISGVIYGNLTPLDAEKYLSRLFSNLIGETPK KKTLIFKSRRKSGVSMRLRYSRMITKIGSKRTRTRKIVLSKRKKSLIKNNGQRTKISNKT KTIKSEMLSKSKLYKLYSSAFSKSNSEECKNLQILDMSSIRPISKFFLYEETNDKVNVSI LWIYIDKASPESFIFAQYLKLIIENRLNYLQKNNNNNNNINTYIKNYHISSSSYLISIEG SSSKEDSNAINNLLLSYLDTFLFPGSSIFNLDLFNSIKEFLVKKYKKEGHYLDSSVANIF EEIINKRFDFTRFRSVLNLLDRLTFENFTSNLEKVRKSAFYILYSMSYKSQPIVPNGFMH LRDPTDIFKLHGIKTFKPAYSRVDKQLNNLP
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/281 Sequence name : 281 Sequence length : 691 VALUES OF COMPUTED PARAMETERS Coef20 : 3.237 CoefTot : -1.284 ChDiff : 37 ZoneTo : 16 KR : 1 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.300 1.612 0.115 0.581 MesoH : 0.220 0.706 -0.192 0.361 MuHd_075 : 13.041 7.611 4.044 1.517 MuHd_095 : 20.000 4.847 3.904 1.953 MuHd_100 : 13.978 2.695 2.143 1.279 MuHd_105 : 4.738 2.228 2.415 1.222 Hmax_075 : 3.967 10.733 -0.870 3.687 Hmax_095 : 9.600 6.000 -0.609 3.700 Hmax_100 : 6.200 6.400 -1.063 3.740 Hmax_105 : -3.600 6.800 -2.743 2.840 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9971 0.0029 DFMC : 0.9941 0.0059
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 691 Chro.30478 MEINPQNMIIIFNLKGDKETIEDTGELTLFDQSILNKDCAKYEEFLSQNKKFRFVILTNVLSKEFKGVIKTKNKFRFILE 80 EQNFCLKKYISHFPESLTQELKIYNKDKDPKTKYNLEKYNIVERLVVPKKLRDLLSSDSSQRATNFPQFQDFYYFIPHKV 160 PTHKIYLAMNFFFPFENKKMASIRSTRIATILLFIKEILLSFSESVSSHLANYSVDFIPKIYLPYDSIVNAFGLSLSLGS 240 APNAFSQFLSNLSINLNSYIDLDEKTFHEFVSYLRKVQVEKSKSPNFIEKVNQINLNHLISTETILNELQTLKVEEVREV 320 FQTMIRQSQISGVIYGNLTPLDAEKYLSRLFSNLIGETPKKKTLIFKSRRKSGVSMRLRYSRMITKIGSKRTRTRKIVLS 400 KRKKSLIKNNGQRTKISNKTKTIKSEMLSKSKLYKLYSSAFSKSNSEECKNLQILDMSSIRPISKFFLYEETNDKVNVSI 480 LWIYIDKASPESFIFAQYLKLIIENRLNYLQKNNNNNNNINTYIKNYHISSSSYLISIEGSSSKEDSNAINNLLLSYLDT 560 FLFPGSSIFNLDLFNSIKEFLVKKYKKEGHYLDSSVANIFEEIINKRFDFTRFRSVLNLLDRLTFENFTSNLEKVRKSAF 640 YILYSMSYKSQPIVPNGFMHLRDPTDIFKLHGIKTFKPAYSRVDKQLNNLP 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Chro.30478 15 IIIFNLK|GD 0.059 . Chro.30478 18 FNLKGDK|ET 0.056 . Chro.30478 37 DQSILNK|DC 0.083 . Chro.30478 41 LNKDCAK|YE 0.064 . Chro.30478 50 EFLSQNK|KF 0.055 . Chro.30478 51 FLSQNKK|FR 0.157 . Chro.30478 53 SQNKKFR|FV 0.191 . Chro.30478 63 LTNVLSK|EF 0.073 . Chro.30478 66 VLSKEFK|GV 0.103 . Chro.30478 70 EFKGVIK|TK 0.061 . Chro.30478 72 KGVIKTK|NK 0.071 . Chro.30478 74 VIKTKNK|FR 0.071 . Chro.30478 76 KTKNKFR|FI 0.136 . Chro.30478 87 EQNFCLK|KY 0.062 . Chro.30478 88 QNFCLKK|YI 0.154 . Chro.30478 102 SLTQELK|IY 0.057 . Chro.30478 106 ELKIYNK|DK 0.071 . Chro.30478 108 KIYNKDK|DP 0.084 . Chro.30478 111 NKDKDPK|TK 0.064 . Chro.30478 113 DKDPKTK|YN 0.073 . Chro.30478 118 TKYNLEK|YN 0.085 . Chro.30478 124 KYNIVER|LV 0.098 . Chro.30478 129 ERLVVPK|KL 0.081 . Chro.30478 130 RLVVPKK|LR 0.075 . Chro.30478 132 VVPKKLR|DL 0.095 . Chro.30478 142 SSDSSQR|AT 0.096 . Chro.30478 159 YYFIPHK|VP 0.056 . Chro.30478 164 HKVPTHK|IY 0.068 . Chro.30478 178 FFPFENK|KM 0.058 . Chro.30478 179 FPFENKK|MA 0.106 . Chro.30478 184 KKMASIR|ST 0.196 . Chro.30478 187 ASIRSTR|IA 0.336 . Chro.30478 196 TILLFIK|EI 0.059 . Chro.30478 220 SVDFIPK|IY 0.060 . Chro.30478 265 YIDLDEK|TF 0.054 . Chro.30478 275 EFVSYLR|KV 0.077 . Chro.30478 276 FVSYLRK|VQ 0.072 . Chro.30478 281 RKVQVEK|SK 0.094 . Chro.30478 283 VQVEKSK|SP 0.083 . Chro.30478 290 SPNFIEK|VN 0.079 . Chro.30478 313 NELQTLK|VE 0.056 . Chro.30478 318 LKVEEVR|EV 0.112 . Chro.30478 326 VFQTMIR|QS 0.079 . Chro.30478 345 TPLDAEK|YL 0.074 . Chro.30478 349 AEKYLSR|LF 0.085 . Chro.30478 360 LIGETPK|KK 0.063 . Chro.30478 361 IGETPKK|KT 0.078 . Chro.30478 362 GETPKKK|TL 0.087 . Chro.30478 367 KKTLIFK|SR 0.095 . Chro.30478 369 TLIFKSR|RK 0.116 . Chro.30478 370 LIFKSRR|KS 0.200 . Chro.30478 371 IFKSRRK|SG 0.083 . Chro.30478 377 KSGVSMR|LR 0.087 . Chro.30478 379 GVSMRLR|YS 0.116 . Chro.30478 382 MRLRYSR|MI 0.409 . Chro.30478 386 YSRMITK|IG 0.067 . Chro.30478 390 ITKIGSK|RT 0.054 . Chro.30478 391 TKIGSKR|TR 0.165 . Chro.30478 393 IGSKRTR|TR 0.108 . Chro.30478 395 SKRTRTR|KI 0.094 . Chro.30478 396 KRTRTRK|IV 0.359 . Chro.30478 401 RKIVLSK|RK 0.059 . Chro.30478 402 KIVLSKR|KK 0.145 . Chro.30478 403 IVLSKRK|KS 0.075 . Chro.30478 404 VLSKRKK|SL 0.240 . Chro.30478 408 RKKSLIK|NN 0.074 . Chro.30478 413 IKNNGQR|TK 0.082 . Chro.30478 415 NNGQRTK|IS 0.066 . Chro.30478 419 RTKISNK|TK 0.063 . Chro.30478 421 KISNKTK|TI 0.086 . Chro.30478 424 NKTKTIK|SE 0.072 . Chro.30478 430 KSEMLSK|SK 0.077 . Chro.30478 432 EMLSKSK|LY 0.053 . Chro.30478 435 SKSKLYK|LY 0.086 . Chro.30478 443 YSSAFSK|SN 0.109 . Chro.30478 450 SNSEECK|NL 0.079 . Chro.30478 461 LDMSSIR|PI 0.108 . Chro.30478 465 SIRPISK|FF 0.069 . Chro.30478 475 YEETNDK|VN 0.054 . Chro.30478 487 LWIYIDK|AS 0.059 . Chro.30478 500 IFAQYLK|LI 0.060 . Chro.30478 506 KLIIENR|LN 0.078 . Chro.30478 512 RLNYLQK|NN 0.069 . Chro.30478 525 NINTYIK|NY 0.064 . Chro.30478 544 IEGSSSK|ED 0.069 . Chro.30478 578 DLFNSIK|EF 0.057 . Chro.30478 583 IKEFLVK|KY 0.070 . Chro.30478 584 KEFLVKK|YK 0.095 . Chro.30478 586 FLVKKYK|KE 0.077 . Chro.30478 587 LVKKYKK|EG 0.094 . Chro.30478 606 FEEIINK|RF 0.054 . Chro.30478 607 EEIINKR|FD 0.183 . Chro.30478 612 KRFDFTR|FR 0.105 . Chro.30478 614 FDFTRFR|SV 0.144 . Chro.30478 622 VLNLLDR|LT 0.091 . Chro.30478 634 FTSNLEK|VR 0.063 . Chro.30478 636 SNLEKVR|KS 0.078 . Chro.30478 637 NLEKVRK|SA 0.186 . Chro.30478 649 LYSMSYK|SQ 0.098 . Chro.30478 662 NGFMHLR|DP 0.118 . Chro.30478 669 DPTDIFK|LH 0.061 . Chro.30478 674 FKLHGIK|TF 0.057 . Chro.30478 677 HGIKTFK|PA 0.067 . Chro.30478 682 FKPAYSR|VD 0.067 . Chro.30478 685 AYSRVDK|QL 0.141 . ____________________________^_________________

  • Fasta :-

    >Chro.30478 ATGGAAATTAATCCACAAAATATGATCATCATCTTCAACCTGAAGGGTGACAAAGAAACG ATCGAAGATACTGGTGAATTAACCTTGTTTGACCAGAGTATTTTAAATAAAGATTGCGCC AAGTATGAAGAATTTCTAAGTCAAAATAAAAAATTTAGATTTGTTATTTTAACAAACGTT TTATCTAAAGAATTTAAAGGAGTTATAAAAACAAAGAATAAATTTAGATTCATTTTGGAA GAACAAAACTTTTGTCTGAAAAAATACATTTCACATTTCCCAGAATCTTTAACTCAAGAA TTAAAGATATACAATAAAGATAAAGATCCAAAAACAAAATACAATCTTGAGAAATACAAT ATTGTTGAGAGGCTTGTTGTTCCAAAGAAACTTCGTGATCTTCTATCTTCAGACTCTTCA CAAAGAGCAACAAATTTTCCGCAATTTCAAGATTTTTATTATTTCATTCCGCACAAAGTA CCAACCCACAAAATTTATTTAGCAATGAACTTCTTTTTTCCCTTTGAAAACAAGAAAATG GCCTCTATTCGATCAACCCGTATTGCTACCATATTACTATTTATTAAAGAGATCTTGCTT TCTTTTTCCGAAAGTGTTTCTTCACATCTTGCAAATTATAGCGTTGATTTTATTCCAAAA ATCTATTTACCATACGATTCAATAGTTAATGCATTTGGATTATCATTATCACTTGGAAGC GCGCCAAACGCATTTTCTCAATTTTTATCAAATCTTTCAATTAATTTGAATTCCTATATT GATTTGGATGAAAAAACATTTCATGAATTTGTTTCTTATTTAAGGAAAGTCCAGGTAGAA AAGTCCAAGAGTCCTAATTTTATTGAGAAGGTAAATCAAATCAATCTTAATCATTTAATT TCAACTGAAACAATTTTGAATGAGTTACAAACTCTAAAAGTTGAGGAGGTTAGAGAAGTT TTCCAAACAATGATTAGACAGAGCCAAATTTCTGGAGTTATTTATGGAAACCTAACTCCA TTAGACGCAGAGAAGTATCTAAGTCGATTATTTTCAAATTTAATTGGTGAAACCCCAAAG AAAAAAACTTTAATTTTTAAATCTAGAAGAAAGTCGGGAGTATCAATGAGATTAAGATAC TCACGTATGATAACTAAAATTGGGTCAAAACGAACTAGAACCAGAAAGATTGTGTTGAGT AAAAGGAAGAAAAGTTTGATAAAAAATAATGGTCAAAGAACCAAAATTTCCAATAAAACA AAAACTATTAAAAGTGAAATGCTTTCTAAATCAAAACTTTATAAGCTTTACTCTTCAGCT TTTTCTAAATCAAATTCAGAGGAATGTAAGAATTTGCAAATTTTAGATATGTCATCAATT AGACCTATTTCGAAGTTTTTCTTATATGAAGAAACAAATGATAAAGTAAACGTTTCAATT TTATGGATATATATTGATAAAGCCTCTCCAGAATCATTTATATTTGCTCAATACCTTAAA CTTATTATAGAAAATAGACTGAATTACCTACAAAAAAATAATAATAATAATAATAATATA AATACTTATATAAAAAATTATCATATATCTTCGAGCTCATATTTAATCTCAATAGAGGGT TCATCAAGCAAAGAAGATTCAAATGCAATAAACAACCTATTATTAAGTTACCTAGATACA TTCCTTTTTCCAGGCTCTTCAATTTTTAATCTAGACCTGTTCAATTCAATAAAAGAATTT CTTGTGAAAAAGTACAAGAAGGAAGGGCATTATTTAGATTCCTCAGTCGCAAATATATTT GAAGAAATCATTAACAAAAGATTCGACTTCACTAGGTTCAGATCAGTTTTGAATCTCCTA GATCGACTAACTTTCGAGAATTTTACTTCAAACCTTGAAAAAGTACGCAAGTCAGCATTT TATATATTATATTCAATGTCTTATAAATCGCAGCCAATAGTTCCAAATGGTTTTATGCAC TTACGTGATCCAACCGATATTTTCAAACTTCATGGAATTAAAACATTCAAACCGGCATAT TCCAGAGTTGACAAACAACTTAACAATCTCCCTTAA
  • Download Fasta

  • Fasta :-

    MEINPQNMIIIFNLKGDKETIEDTGELTLFDQSILNKDCAKYEEFLSQNKKFRFVILTNV LSKEFKGVIKTKNKFRFILEEQNFCLKKYISHFPESLTQELKIYNKDKDPKTKYNLEKYN IVERLVVPKKLRDLLSSDSSQRATNFPQFQDFYYFIPHKVPTHKIYLAMNFFFPFENKKM ASIRSTRIATILLFIKEILLSFSESVSSHLANYSVDFIPKIYLPYDSIVNAFGLSLSLGS APNAFSQFLSNLSINLNSYIDLDEKTFHEFVSYLRKVQVEKSKSPNFIEKVNQINLNHLI STETILNELQTLKVEEVREVFQTMIRQSQISGVIYGNLTPLDAEKYLSRLFSNLIGETPK KKTLIFKSRRKSGVSMRLRYSRMITKIGSKRTRTRKIVLSKRKKSLIKNNGQRTKISNKT KTIKSEMLSKSKLYKLYSSAFSKSNSEECKNLQILDMSSIRPISKFFLYEETNDKVNVSI LWIYIDKASPESFIFAQYLKLIIENRLNYLQKNNNNNNNINTYIKNYHISSSSYLISIEG SSSKEDSNAINNLLLSYLDTFLFPGSSIFNLDLFNSIKEFLVKKYKKEGHYLDSSVANIF EEIINKRFDFTRFRSVLNLLDRLTFENFTSNLEKVRKSAFYILYSMSYKSQPIVPNGFMH LRDPTDIFKLHGIKTFKPAYSRVDKQLNNLP

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
Chro.30478442 SSSAFSKSNS0.993unspChro.30478442 SSSAFSKSNS0.993unspChro.30478442 SSSAFSKSNS0.993unspChro.30478542 SIEGSSSKED0.997unspChro.30478543 SEGSSSKEDS0.998unspChro.30478328 SMIRQSQISG0.99unspChro.30478372 SSRRKSGVSM0.998unsp

Chro.30478      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India