Chro.40151 | hypothetical protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
Chro.40151OTHER0.9999590.0000060.000035
No Results

  • Fasta :-

    >Chro.40151 MTNLNNKKLNNNDINSELKIYSQRNVQQCAESFLRVEENNNNSIELINTYRFLNNHIPQD FPKSRIFNFDNKNISETNNYHIRRKSSNSGVKNKQNNNESITEIINHKLQDHFESINHFE KIKFLISSNYAFENIRKLNILPPIRIYELWKGTPMDIRQILFNAISIILTNRIKIWSNID VKQKDYFIIWGCNYLSQISTYLSIPEIITEQMIKIYYLNIDDPNIENFPDIRPLKNTLIE YCKNELQPKLDILFNEYSCNNNSINNNVRSKNIMKQNRDLNAETFLLIRNNSAFEVSYNN YEQNTHTHPRASSLNNRISSKILNLPLNFPNAFDNNLKIFNNSNTHSSNNCNVNAKSNCQ RRKTWHSGINNLEYILDEQSPSSFLIIILSLLRLHAIDGILNSRTLSILQEIYLLLNYNN EYFKSSLLIFDSLQMLTFNDIKKSELKCDTKNLEKGWNKSMRYLKVAGATILGGVVLATA TTIAAPGILAGLGTLGLAFPGILGTAMTAGTSAATMSAVAGVGGAGLSGWKMSRRESPLQ IFNFHQVGENPDKSGLLPILIGISGWLRNNDDIFIPWKIAFNGIEWMESYTVEFEPEVLS KLGNSIAITMSQDLAIFAGKAILLQTVVGTLTAALSWPITIMQYAATLDNTWAVSRQKTE QAAIILADVLCSIETTGDRPIKLVGYSMGARLIYLTLQIMYDRKQFNKIQDVVLLGLPSS LNTKKWIKARSVVSNRMINVFSRSDWVLAFFYRYMQWGFHVAGISPINVSGVENYDVTGM ITSHDQYPDKIREILYYVNFF
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/395 Sequence name : 395 Sequence length : 801 VALUES OF COMPUTED PARAMETERS Coef20 : 3.479 CoefTot : -0.786 ChDiff : 11 ZoneTo : 12 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.947 2.041 0.370 0.777 MesoH : 1.396 1.152 0.166 0.530 MuHd_075 : 26.078 22.860 8.459 6.420 MuHd_095 : 4.145 1.154 1.359 1.196 MuHd_100 : 11.308 6.904 1.911 1.160 MuHd_105 : 14.071 10.405 2.409 2.362 Hmax_075 : 2.217 10.383 -1.325 3.663 Hmax_095 : -8.800 -2.200 -5.709 0.306 Hmax_100 : -10.400 -2.300 -5.722 -0.240 Hmax_105 : -9.700 3.100 -5.073 1.220 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9753 0.0247 DFMC : 0.9635 0.0365
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 801 Chro.40151 MTNLNNKKLNNNDINSELKIYSQRNVQQCAESFLRVEENNNNSIELINTYRFLNNHIPQDFPKSRIFNFDNKNISETNNY 80 HIRRKSSNSGVKNKQNNNESITEIINHKLQDHFESINHFEKIKFLISSNYAFENIRKLNILPPIRIYELWKGTPMDIRQI 160 LFNAISIILTNRIKIWSNIDVKQKDYFIIWGCNYLSQISTYLSIPEIITEQMIKIYYLNIDDPNIENFPDIRPLKNTLIE 240 YCKNELQPKLDILFNEYSCNNNSINNNVRSKNIMKQNRDLNAETFLLIRNNSAFEVSYNNYEQNTHTHPRASSLNNRISS 320 KILNLPLNFPNAFDNNLKIFNNSNTHSSNNCNVNAKSNCQRRKTWHSGINNLEYILDEQSPSSFLIIILSLLRLHAIDGI 400 LNSRTLSILQEIYLLLNYNNEYFKSSLLIFDSLQMLTFNDIKKSELKCDTKNLEKGWNKSMRYLKVAGATILGGVVLATA 480 TTIAAPGILAGLGTLGLAFPGILGTAMTAGTSAATMSAVAGVGGAGLSGWKMSRRESPLQIFNFHQVGENPDKSGLLPIL 560 IGISGWLRNNDDIFIPWKIAFNGIEWMESYTVEFEPEVLSKLGNSIAITMSQDLAIFAGKAILLQTVVGTLTAALSWPIT 640 IMQYAATLDNTWAVSRQKTEQAAIILADVLCSIETTGDRPIKLVGYSMGARLIYLTLQIMYDRKQFNKIQDVVLLGLPSS 720 LNTKKWIKARSVVSNRMINVFSRSDWVLAFFYRYMQWGFHVAGISPINVSGVENYDVTGMITSHDQYPDKIREILYYVNF 800 F 880 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 . 880 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Chro.40151 7 MTNLNNK|KL 0.061 . Chro.40151 8 TNLNNKK|LN 0.093 . Chro.40151 19 DINSELK|IY 0.069 . Chro.40151 24 LKIYSQR|NV 0.144 . Chro.40151 35 CAESFLR|VE 0.075 . Chro.40151 51 ELINTYR|FL 0.104 . Chro.40151 63 IPQDFPK|SR 0.096 . Chro.40151 65 QDFPKSR|IF 0.091 . Chro.40151 72 IFNFDNK|NI 0.071 . Chro.40151 83 TNNYHIR|RK 0.100 . Chro.40151 84 NNYHIRR|KS 0.169 . Chro.40151 85 NYHIRRK|SS 0.141 . Chro.40151 92 SSNSGVK|NK 0.065 . Chro.40151 94 NSGVKNK|QN 0.074 . Chro.40151 108 TEIINHK|LQ 0.063 . Chro.40151 121 SINHFEK|IK 0.064 . Chro.40151 123 NHFEKIK|FL 0.071 . Chro.40151 136 YAFENIR|KL 0.075 . Chro.40151 137 AFENIRK|LN 0.061 . Chro.40151 145 NILPPIR|IY 0.079 . Chro.40151 151 RIYELWK|GT 0.073 . Chro.40151 158 GTPMDIR|QI 0.076 . Chro.40151 172 SIILTNR|IK 0.082 . Chro.40151 174 ILTNRIK|IW 0.063 . Chro.40151 182 WSNIDVK|QK 0.066 . Chro.40151 184 NIDVKQK|DY 0.079 . Chro.40151 214 ITEQMIK|IY 0.062 . Chro.40151 232 ENFPDIR|PL 0.077 . Chro.40151 235 PDIRPLK|NT 0.099 . Chro.40151 243 TLIEYCK|NE 0.056 . Chro.40151 249 KNELQPK|LD 0.058 . Chro.40151 269 SINNNVR|SK 0.132 . Chro.40151 271 NNNVRSK|NI 0.084 . Chro.40151 275 RSKNIMK|QN 0.068 . Chro.40151 278 NIMKQNR|DL 0.152 . Chro.40151 289 ETFLLIR|NN 0.086 . Chro.40151 310 NTHTHPR|AS 0.124 . Chro.40151 317 ASSLNNR|IS 0.150 . Chro.40151 321 NNRISSK|IL 0.066 . Chro.40151 338 AFDNNLK|IF 0.060 . Chro.40151 356 NCNVNAK|SN 0.110 . Chro.40151 361 AKSNCQR|RK 0.093 . Chro.40151 362 KSNCQRR|KT 0.249 . Chro.40151 363 SNCQRRK|TW 0.130 . Chro.40151 393 IILSLLR|LH 0.060 . Chro.40151 404 DGILNSR|TL 0.079 . Chro.40151 424 YNNEYFK|SS 0.084 . Chro.40151 442 LTFNDIK|KS 0.059 . Chro.40151 443 TFNDIKK|SE 0.121 . Chro.40151 447 IKKSELK|CD 0.064 . Chro.40151 451 ELKCDTK|NL 0.067 . Chro.40151 455 DTKNLEK|GW 0.063 . Chro.40151 459 LEKGWNK|SM 0.070 . Chro.40151 462 GWNKSMR|YL 0.223 . Chro.40151 465 KSMRYLK|VA 0.242 . Chro.40151 531 AGLSGWK|MS 0.054 . Chro.40151 534 SGWKMSR|RE 0.083 . Chro.40151 535 GWKMSRR|ES 0.153 . Chro.40151 553 VGENPDK|SG 0.064 . Chro.40151 568 GISGWLR|NN 0.101 . Chro.40151 578 DIFIPWK|IA 0.077 . Chro.40151 601 EPEVLSK|LG 0.065 . Chro.40151 620 LAIFAGK|AI 0.063 . Chro.40151 656 NTWAVSR|QK 0.087 . Chro.40151 658 WAVSRQK|TE 0.060 . Chro.40151 679 IETTGDR|PI 0.079 . Chro.40151 682 TGDRPIK|LV 0.232 . Chro.40151 691 GYSMGAR|LI 0.093 . Chro.40151 703 LQIMYDR|KQ 0.080 . Chro.40151 704 QIMYDRK|QF 0.098 . Chro.40151 708 DRKQFNK|IQ 0.076 . Chro.40151 724 PSSLNTK|KW 0.072 . Chro.40151 725 SSLNTKK|WI 0.096 . Chro.40151 728 NTKKWIK|AR 0.062 . Chro.40151 730 KKWIKAR|SV 0.323 . Chro.40151 736 RSVVSNR|MI 0.094 . Chro.40151 743 MINVFSR|SD 0.141 . Chro.40151 753 VLAFFYR|YM 0.131 . Chro.40151 790 HDQYPDK|IR 0.064 . Chro.40151 792 QYPDKIR|EI 0.090 . ____________________________^_________________

  • Fasta :-

    >Chro.40151 ATGACCAATTTAAACAATAAAAAACTGAATAATAATGATATAAATTCGGAATTGAAAATA TACTCCCAAAGGAATGTACAACAATGTGCAGAATCATTCTTGAGAGTTGAAGAAAATAAT AACAATAGTATTGAATTAATTAATACATATAGATTTTTAAACAACCATATTCCACAAGAT TTTCCAAAATCAAGAATATTTAATTTTGATAATAAAAACATTTCGGAAACAAATAATTAC CATATTAGAAGAAAATCAAGTAATTCTGGAGTAAAGAATAAACAGAATAATAATGAATCA ATAACTGAAATTATTAACCATAAACTTCAAGACCATTTTGAAAGTATTAATCATTTTGAA AAGATAAAATTCTTGATTTCAAGTAATTATGCTTTTGAAAATATCCGAAAATTGAATATT CTTCCTCCAATTAGAATTTATGAGCTTTGGAAAGGGACTCCAATGGATATTAGACAGATT TTATTTAATGCAATTTCCATAATTTTAACAAATCGTATAAAAATTTGGTCCAATATTGAT GTAAAACAAAAAGATTACTTTATTATATGGGGCTGTAATTATTTAAGCCAAATAAGTACT TATTTATCAATACCAGAAATAATAACAGAACAAATGATAAAAATATACTATTTAAATATT GATGATCCAAATATTGAGAATTTTCCAGATATTAGACCATTAAAAAATACTTTGATAGAG TATTGTAAAAATGAATTACAACCAAAACTTGATATTTTATTTAATGAATATAGTTGTAAT AATAATAGTATTAATAATAATGTAAGATCCAAAAATATTATGAAGCAAAATAGGGATTTA AATGCTGAAACTTTTTTACTGATCAGAAATAATAGTGCATTTGAAGTTTCATATAATAAT TATGAACAGAATACTCATACACATCCAAGAGCAAGTTCATTAAATAATAGAATATCTTCG AAAATATTAAATTTACCATTGAATTTCCCAAATGCTTTTGATAATAATTTGAAGATATTT AATAATAGCAATACTCATTCCAGTAATAATTGTAATGTTAATGCAAAATCAAATTGCCAA AGAAGAAAAACTTGGCATTCAGGCATTAATAATCTGGAATATATATTAGATGAACAATCA CCAAGCTCATTTTTAATAATAATATTATCATTATTAAGACTTCATGCAATTGATGGAATA TTAAATTCACGTACTTTATCAATTCTCCAAGAAATTTATCTTTTGTTGAATTATAATAAT GAATATTTTAAATCATCACTTTTAATTTTTGATTCTCTCCAAATGTTAACTTTTAATGAT ATTAAAAAGAGTGAACTTAAATGCGATACCAAAAATCTTGAAAAAGGTTGGAATAAATCA ATGAGATATTTAAAAGTTGCTGGTGCTACTATTTTGGGCGGTGTTGTATTGGCAACAGCT ACAACAATTGCAGCACCTGGTATTCTTGCAGGATTGGGCACATTAGGATTAGCTTTTCCT GGAATTCTTGGAACGGCCATGACTGCTGGAACAAGTGCAGCCACAATGTCAGCAGTTGCT GGTGTAGGAGGTGCAGGTCTTTCAGGATGGAAAATGAGTAGAAGAGAATCTCCATTACAA ATTTTTAACTTTCATCAAGTTGGTGAAAATCCGGATAAATCTGGTCTTCTTCCTATTTTA ATTGGTATTAGCGGTTGGCTTAGAAATAATGATGATATATTTATTCCTTGGAAAATTGCT TTTAATGGAATTGAATGGATGGAAAGTTATACTGTAGAATTTGAACCTGAAGTGTTATCA AAGTTAGGTAATTCCATAGCAATAACAATGTCACAAGATCTTGCCATTTTTGCAGGAAAA GCTATTTTGCTTCAAACAGTGGTTGGCACTTTAACAGCAGCTTTATCCTGGCCTATAACA ATTATGCAATATGCTGCAACTCTCGATAATACTTGGGCAGTTTCAAGACAAAAAACTGAG CAGGCTGCTATAATTCTTGCTGATGTTTTATGTTCAATTGAAACTACAGGTGATAGACCT ATTAAACTTGTTGGTTATAGTATGGGTGCTAGACTTATATATTTAACATTACAAATTATG TATGATCGTAAACAATTCAATAAAATTCAAGATGTTGTATTGTTAGGATTACCTTCATCT TTAAATACCAAGAAATGGATTAAAGCTAGATCTGTTGTTTCAAATCGAATGATTAATGTA TTTTCAAGGTCTGACTGGGTTCTTGCATTTTTTTATAGATATATGCAGTGGGGATTCCAT GTCGCAGGAATTTCACCCATAAATGTTTCTGGTGTTGAAAATTATGATGTTACGGGAATG ATTACCTCGCATGATCAATATCCTGATAAAATTCGTGAAATTTTATATTATGTTAACTTT TTTTAG
  • Download Fasta

  • Fasta :-

    MTNLNNKKLNNNDINSELKIYSQRNVQQCAESFLRVEENNNNSIELINTYRFLNNHIPQD FPKSRIFNFDNKNISETNNYHIRRKSSNSGVKNKQNNNESITEIINHKLQDHFESINHFE KIKFLISSNYAFENIRKLNILPPIRIYELWKGTPMDIRQILFNAISIILTNRIKIWSNID VKQKDYFIIWGCNYLSQISTYLSIPEIITEQMIKIYYLNIDDPNIENFPDIRPLKNTLIE YCKNELQPKLDILFNEYSCNNNSINNNVRSKNIMKQNRDLNAETFLLIRNNSAFEVSYNN YEQNTHTHPRASSLNNRISSKILNLPLNFPNAFDNNLKIFNNSNTHSSNNCNVNAKSNCQ RRKTWHSGINNLEYILDEQSPSSFLIIILSLLRLHAIDGILNSRTLSILQEIYLLLNYNN EYFKSSLLIFDSLQMLTFNDIKKSELKCDTKNLEKGWNKSMRYLKVAGATILGGVVLATA TTIAAPGILAGLGTLGLAFPGILGTAMTAGTSAATMSAVAGVGGAGLSGWKMSRRESPLQ IFNFHQVGENPDKSGLLPILIGISGWLRNNDDIFIPWKIAFNGIEWMESYTVEFEPEVLS KLGNSIAITMSQDLAIFAGKAILLQTVVGTLTAALSWPITIMQYAATLDNTWAVSRQKTE QAAIILADVLCSIETTGDRPIKLVGYSMGARLIYLTLQIMYDRKQFNKIQDVVLLGLPSS LNTKKWIKARSVVSNRMINVFSRSDWVLAFFYRYMQWGFHVAGISPINVSGVENYDVTGM ITSHDQYPDKIREILYYVNFF

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
Chro.40151533 SGWKMSRRES0.993unspChro.40151533 SGWKMSRRES0.993unspChro.40151533 SGWKMSRRES0.993unspChro.40151537 SSRRESPLQI0.997unspChro.4015186 SIRRKSSNSG0.992unspChro.40151312 SHPRASSLNN0.992unsp

Chro.40151      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India