Chro.40331 | aminopeptidase

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0016787      

  • Computed_GO_Functions:  hydrolase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
Chro.40331OTHER0.9992810.0001850.000534
No Results

  • Fasta :-

    >Chro.40331 MSNISKLKKLEELRGIMSQHGVDAYIISSSDPHMSEYTPDKYKRREFMTGFFGSQGICLV TQSSAHLIVDGRYIVEAKKTATPEYQVHLLKKGFYADIVDILKEESFDGTLGIDVEVTSW MSFKALANYIELSDLHLNTNFRIKLLNLNFVDVLRPQEEIEQGRSEIFVHGIEYAGESSK SKVNKVLLEMKKLNAKILFLSSLTQISWLLNLRGSDVHCTPVFLSYLIVEILDDTVGIDK KETSFNLKVFVNVESIKCCEEVLKNEFQDKISIIQIENIMDELFHSFSKLNSHTKDKLNK IWLPENFCNLAAMDTLFKVLNPRENCNNSSYYKYLIDYLNSSKLLITSESPIIMLRAIKN KIELKGMRECHIYDSLALTKFLYYLYKAGRDKTLFNGKVSEWDLSQKLLEFRKQQPKFVY PSFDTISSIGENGAIIHYRPEKENSSIIKPDLYLCDSGGQYHTGTTDVTRTLFLFGIGEE RPTIEQIESFTRVLIGFIRLHKLVFPIGTNATAIDVLARASLWEAGLDYLHGTGHGVGSF LSVHEEPWSICYKVGRDGASKQNLAAGAVVSIEPGYYEEGKYGIRIENLAEIIEADIDNG YKKMNKFLKFSPLTYAPIQKEMIDISILSDDELDWLNWYHSKTLENLEPLVDDDPEFLKW LVQVCSPINRYISKIDFPKTLYQ
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/576 Sequence name : 576 Sequence length : 683 VALUES OF COMPUTED PARAMETERS Coef20 : 3.760 CoefTot : -0.005 ChDiff : -14 ZoneTo : 10 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.376 1.565 0.117 0.586 MesoH : -0.318 0.529 -0.316 0.290 MuHd_075 : 9.161 4.143 2.577 2.971 MuHd_095 : 11.040 7.250 1.964 3.136 MuHd_100 : 4.436 2.746 0.038 0.862 MuHd_105 : 9.615 12.620 3.174 2.524 Hmax_075 : -10.150 0.350 -4.795 0.700 Hmax_095 : -2.712 2.713 -3.319 1.500 Hmax_100 : -4.900 5.400 -3.319 1.500 Hmax_105 : -1.750 7.700 -2.781 2.287 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8458 0.1542 DFMC : 0.8190 0.1810
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 683 Chro.40331 MSNISKLKKLEELRGIMSQHGVDAYIISSSDPHMSEYTPDKYKRREFMTGFFGSQGICLVTQSSAHLIVDGRYIVEAKKT 80 ATPEYQVHLLKKGFYADIVDILKEESFDGTLGIDVEVTSWMSFKALANYIELSDLHLNTNFRIKLLNLNFVDVLRPQEEI 160 EQGRSEIFVHGIEYAGESSKSKVNKVLLEMKKLNAKILFLSSLTQISWLLNLRGSDVHCTPVFLSYLIVEILDDTVGIDK 240 KETSFNLKVFVNVESIKCCEEVLKNEFQDKISIIQIENIMDELFHSFSKLNSHTKDKLNKIWLPENFCNLAAMDTLFKVL 320 NPRENCNNSSYYKYLIDYLNSSKLLITSESPIIMLRAIKNKIELKGMRECHIYDSLALTKFLYYLYKAGRDKTLFNGKVS 400 EWDLSQKLLEFRKQQPKFVYPSFDTISSIGENGAIIHYRPEKENSSIIKPDLYLCDSGGQYHTGTTDVTRTLFLFGIGEE 480 RPTIEQIESFTRVLIGFIRLHKLVFPIGTNATAIDVLARASLWEAGLDYLHGTGHGVGSFLSVHEEPWSICYKVGRDGAS 560 KQNLAAGAVVSIEPGYYEEGKYGIRIENLAEIIEADIDNGYKKMNKFLKFSPLTYAPIQKEMIDISILSDDELDWLNWYH 640 SKTLENLEPLVDDDPEFLKWLVQVCSPINRYISKIDFPKTLYQ 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ........................................... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Chro.40331 6 -MSNISK|LK 0.060 . Chro.40331 8 SNISKLK|KL 0.075 . Chro.40331 9 NISKLKK|LE 0.102 . Chro.40331 14 KKLEELR|GI 0.089 . Chro.40331 41 SEYTPDK|YK 0.081 . Chro.40331 43 YTPDKYK|RR 0.061 . Chro.40331 44 TPDKYKR|RE 0.182 . Chro.40331 45 PDKYKRR|EF 0.249 . Chro.40331 72 HLIVDGR|YI 0.105 . Chro.40331 78 RYIVEAK|KT 0.070 . Chro.40331 79 YIVEAKK|TA 0.099 . Chro.40331 91 YQVHLLK|KG 0.057 . Chro.40331 92 QVHLLKK|GF 0.122 . Chro.40331 103 DIVDILK|EE 0.054 . Chro.40331 124 TSWMSFK|AL 0.079 . Chro.40331 142 HLNTNFR|IK 0.079 . Chro.40331 144 NTNFRIK|LL 0.066 . Chro.40331 155 NFVDVLR|PQ 0.097 . Chro.40331 164 EEIEQGR|SE 0.112 . Chro.40331 180 YAGESSK|SK 0.072 . Chro.40331 182 GESSKSK|VN 0.074 . Chro.40331 185 SKSKVNK|VL 0.080 . Chro.40331 191 KVLLEMK|KL 0.061 . Chro.40331 192 VLLEMKK|LN 0.086 . Chro.40331 196 MKKLNAK|IL 0.065 . Chro.40331 213 SWLLNLR|GS 0.074 . Chro.40331 240 DTVGIDK|KE 0.052 . Chro.40331 241 TVGIDKK|ET 0.120 . Chro.40331 248 ETSFNLK|VF 0.064 . Chro.40331 257 VNVESIK|CC 0.074 . Chro.40331 264 CCEEVLK|NE 0.059 . Chro.40331 270 KNEFQDK|IS 0.072 . Chro.40331 289 LFHSFSK|LN 0.063 . Chro.40331 295 KLNSHTK|DK 0.076 . Chro.40331 297 NSHTKDK|LN 0.070 . Chro.40331 300 TKDKLNK|IW 0.067 . Chro.40331 318 AMDTLFK|VL 0.057 . Chro.40331 323 FKVLNPR|EN 0.077 . Chro.40331 333 NNSSYYK|YL 0.097 . Chro.40331 343 DYLNSSK|LL 0.060 . Chro.40331 356 SPIIMLR|AI 0.096 . Chro.40331 359 IMLRAIK|NK 0.095 . Chro.40331 361 LRAIKNK|IE 0.078 . Chro.40331 365 KNKIELK|GM 0.062 . Chro.40331 368 IELKGMR|EC 0.083 . Chro.40331 380 DSLALTK|FL 0.062 . Chro.40331 387 FLYYLYK|AG 0.063 . Chro.40331 390 YLYKAGR|DK 0.085 . Chro.40331 392 YKAGRDK|TL 0.071 . Chro.40331 398 KTLFNGK|VS 0.063 . Chro.40331 407 EWDLSQK|LL 0.060 . Chro.40331 412 QKLLEFR|KQ 0.078 . Chro.40331 413 KLLEFRK|QQ 0.068 . Chro.40331 417 FRKQQPK|FV 0.127 . Chro.40331 439 GAIIHYR|PE 0.096 . Chro.40331 442 IHYRPEK|EN 0.137 . Chro.40331 449 ENSSIIK|PD 0.065 . Chro.40331 470 GTTDVTR|TL 0.085 . Chro.40331 481 FGIGEER|PT 0.090 . Chro.40331 492 QIESFTR|VL 0.079 . Chro.40331 499 VLIGFIR|LH 0.076 . Chro.40331 502 GFIRLHK|LV 0.172 . Chro.40331 519 AIDVLAR|AS 0.079 . Chro.40331 553 PWSICYK|VG 0.067 . Chro.40331 556 ICYKVGR|DG 0.117 . Chro.40331 561 GRDGASK|QN 0.067 . Chro.40331 581 GYYEEGK|YG 0.076 . Chro.40331 585 EGKYGIR|IE 0.070 . Chro.40331 602 DIDNGYK|KM 0.058 . Chro.40331 603 IDNGYKK|MN 0.103 . Chro.40331 606 GYKKMNK|FL 0.066 . Chro.40331 609 KMNKFLK|FS 0.066 . Chro.40331 620 TYAPIQK|EM 0.064 . Chro.40331 642 LNWYHSK|TL 0.076 . Chro.40331 659 DDPEFLK|WL 0.060 . Chro.40331 670 VCSPINR|YI 0.142 . Chro.40331 674 INRYISK|ID 0.070 . Chro.40331 679 SKIDFPK|TL 0.078 . ____________________________^_________________

  • Fasta :-

    >Chro.40331 ATGTCAAATATTTCAAAATTGAAAAAACTAGAAGAACTTAGAGGTATTATGAGCCAACAT GGGGTTGACGCATATATCATTAGTTCAAGCGACCCTCATATGTCGGAATATACTCCTGAT AAATACAAACGAAGAGAATTTATGACTGGTTTCTTTGGGTCACAGGGAATTTGTCTTGTT ACACAGTCGAGCGCACATTTAATTGTTGATGGTAGATATATTGTCGAAGCAAAGAAGACT GCTACTCCTGAGTATCAGGTCCATTTGTTAAAAAAGGGCTTTTACGCTGATATTGTAGAT ATTTTAAAAGAAGAAAGTTTTGATGGTACATTAGGAATTGACGTTGAGGTTACTTCTTGG ATGTCATTTAAAGCCTTAGCTAATTATATTGAACTTTCAGATCTACATTTAAATACGAAC TTCCGAATAAAATTACTAAATTTGAATTTTGTCGATGTTTTACGGCCACAAGAAGAGATT GAACAAGGTAGAAGTGAGATTTTTGTTCATGGAATTGAATACGCTGGTGAATCATCTAAG TCAAAGGTTAACAAAGTTTTGTTGGAAATGAAAAAACTGAATGCAAAGATATTGTTTCTA AGCAGCCTAACTCAAATTTCATGGCTACTTAATTTAAGAGGTTCAGATGTACATTGCACA CCTGTATTTCTTTCATATCTAATTGTCGAAATTCTTGATGATACAGTTGGAATAGATAAG AAGGAAACATCATTTAATCTTAAAGTTTTTGTTAATGTTGAATCTATTAAGTGTTGCGAA GAAGTATTGAAAAATGAATTCCAGGACAAAATTTCTATAATTCAAATTGAAAATATAATG GATGAACTCTTTCATTCATTTAGTAAATTGAATTCACATACAAAAGACAAATTGAATAAA ATATGGCTGCCTGAGAATTTTTGCAACTTAGCAGCAATGGACACGTTATTTAAAGTATTG AACCCTCGTGAAAATTGCAATAATTCGAGTTACTATAAATATTTAATCGACTACTTAAAC TCTTCAAAATTACTGATAACTTCTGAGTCCCCTATCATCATGCTACGTGCAATAAAGAAC AAAATCGAATTAAAGGGAATGCGCGAGTGCCATATTTATGATAGTTTAGCACTTACTAAA TTCCTATATTATTTGTACAAGGCTGGAAGAGATAAGACTCTTTTTAATGGAAAAGTATCC GAATGGGATCTTTCTCAAAAGTTGCTTGAATTTAGAAAACAACAACCAAAATTTGTCTAT CCAAGTTTTGATACAATTTCTTCTATAGGAGAAAATGGGGCGATAATTCATTATCGTCCT GAAAAAGAAAATTCTTCAATTATTAAGCCTGATCTTTACCTTTGTGATTCTGGCGGACAG TACCATACTGGCACAACAGATGTAACAAGAACTTTGTTCTTGTTCGGGATTGGAGAAGAA AGGCCAACAATTGAGCAAATTGAATCATTTACTCGAGTATTGATAGGTTTTATTCGCTTA CATAAGCTAGTATTCCCAATTGGGACAAATGCTACTGCAATTGACGTTCTTGCAAGAGCC AGCCTATGGGAGGCTGGTTTAGATTATTTACATGGTACTGGACATGGGGTTGGCTCATTT TTATCTGTTCATGAAGAGCCCTGGTCAATTTGTTATAAGGTTGGAAGGGATGGTGCTTCT AAACAAAATCTAGCTGCAGGCGCAGTAGTTTCAATTGAACCTGGATACTATGAAGAAGGA AAATACGGTATAAGAATTGAAAACTTGGCTGAGATTATTGAAGCAGATATTGATAATGGC TACAAAAAGATGAATAAATTTCTCAAGTTCTCACCTCTTACATACGCACCCATTCAAAAA GAGATGATTGACATTTCAATTCTTTCAGATGATGAACTAGATTGGTTAAATTGGTATCAT TCAAAAACCCTGGAGAACTTAGAACCGCTGGTAGATGATGACCCCGAGTTTTTGAAATGG CTAGTTCAAGTATGTTCACCAATAAATAGATATATTTCAAAAATTGATTTTCCAAAAACA TTATACCAGTAA
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  • Fasta :-

    MSNISKLKKLEELRGIMSQHGVDAYIISSSDPHMSEYTPDKYKRREFMTGFFGSQGICLV TQSSAHLIVDGRYIVEAKKTATPEYQVHLLKKGFYADIVDILKEESFDGTLGIDVEVTSW MSFKALANYIELSDLHLNTNFRIKLLNLNFVDVLRPQEEIEQGRSEIFVHGIEYAGESSK SKVNKVLLEMKKLNAKILFLSSLTQISWLLNLRGSDVHCTPVFLSYLIVEILDDTVGIDK KETSFNLKVFVNVESIKCCEEVLKNEFQDKISIIQIENIMDELFHSFSKLNSHTKDKLNK IWLPENFCNLAAMDTLFKVLNPRENCNNSSYYKYLIDYLNSSKLLITSESPIIMLRAIKN KIELKGMRECHIYDSLALTKFLYYLYKAGRDKTLFNGKVSEWDLSQKLLEFRKQQPKFVY PSFDTISSIGENGAIIHYRPEKENSSIIKPDLYLCDSGGQYHTGTTDVTRTLFLFGIGEE RPTIEQIESFTRVLIGFIRLHKLVFPIGTNATAIDVLARASLWEAGLDYLHGTGHGVGSF LSVHEEPWSICYKVGRDGASKQNLAAGAVVSIEPGYYEEGKYGIRIENLAEIIEADIDNG YKKMNKFLKFSPLTYAPIQKEMIDISILSDDELDWLNWYHSKTLENLEPLVDDDPEFLKW LVQVCSPINRYISKIDFPKTLYQ

  • title: active site
  • coordinates: H437,D456,D467,S539,E573,E587
No Results
No Results
IDSitePeptideScoreMethod
Chro.40331673 SNRYISKIDF0.998unsp

Chro.40331      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India