Chro.40483 | hypothetical protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0003824      GO:0046872      

  • Computed_GO_Functions:  catalytic activity      metal ion binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
Chro.40483OTHER0.9996280.0000530.000318
No Results

  • Fasta :-

    >Chro.40483 MVRDCRLAICKYHDTQISISENVNVWYKARNDKKHPYFKGILRLSSAFNSFKFITMILSY ILVISMNNTLNLPLIQDAKLTFSPRNSPEQLSNVPSLDLHISGYSSSLYIIIKTILSSFN SEEVITETVLNDSLFIYKGLLMKKKETMTSELKARELSWRIIAPNYPTLGRQYLGLSQIT YQELYNEFKKFKENLCIDGLFIGNLDRAELEKLLKEFSTRVGIKAKKEQCLKLFKSRSFP IKDFRGTANKVFYHYNRPDYFELSKNYINSNLDEKAMKKLDTKFSIENLFKLLNEECGQI NCTNEVMRSGYLDFKLSSDEFGPNIALLDIIIYKNIQDFYTDNVDIGILYLNDAYYNTYW LNESLKMTSESLSLKTFIEAFDSYYKWSVQLESWDYSANDLGLYISKFTDKYSNYLKNGF GEDYKAIKNLTISKLKNKLLKSDIDEEFNSHKFNLGYSESVIESLKELDFFDFKSKMNHI LNDYASFLLVQVQSTEKKDLILACKXSNLYSESRNPRRNRFXRI
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/737 Sequence name : 737 Sequence length : 524 VALUES OF COMPUTED PARAMETERS Coef20 : 4.319 CoefTot : 0.135 ChDiff : 7 ZoneTo : 3 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.665 1.818 0.186 0.632 MesoH : 0.000 0.497 -0.267 0.270 MuHd_075 : 2.622 1.793 3.236 1.605 MuHd_095 : 27.963 15.599 6.667 6.182 MuHd_100 : 27.025 11.009 5.769 4.855 MuHd_105 : 24.541 6.822 5.287 3.858 Hmax_075 : 2.917 8.400 2.722 1.948 Hmax_095 : 5.600 10.850 1.289 3.360 Hmax_100 : 7.900 10.100 1.701 3.460 Hmax_105 : 13.200 12.900 3.432 4.260 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9059 0.0941 DFMC : 0.9300 0.0700
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 524 Chro.40483 MVRDCRLAICKYHDTQISISENVNVWYKARNDKKHPYFKGILRLSSAFNSFKFITMILSYILVISMNNTLNLPLIQDAKL 80 TFSPRNSPEQLSNVPSLDLHISGYSSSLYIIIKTILSSFNSEEVITETVLNDSLFIYKGLLMKKKETMTSELKARELSWR 160 IIAPNYPTLGRQYLGLSQITYQELYNEFKKFKENLCIDGLFIGNLDRAELEKLLKEFSTRVGIKAKKEQCLKLFKSRSFP 240 IKDFRGTANKVFYHYNRPDYFELSKNYINSNLDEKAMKKLDTKFSIENLFKLLNEECGQINCTNEVMRSGYLDFKLSSDE 320 FGPNIALLDIIIYKNIQDFYTDNVDIGILYLNDAYYNTYWLNESLKMTSESLSLKTFIEAFDSYYKWSVQLESWDYSAND 400 LGLYISKFTDKYSNYLKNGFGEDYKAIKNLTISKLKNKLLKSDIDEEFNSHKFNLGYSESVIESLKELDFFDFKSKMNHI 480 LNDYASFLLVQVQSTEKKDLILACKXSNLYSESRNPRRNRFXRI 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ..........................................P. 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ Chro.40483 3 ----MVR|DC 0.090 . Chro.40483 6 -MVRDCR|LA 0.235 . Chro.40483 11 CRLAICK|YH 0.073 . Chro.40483 28 NVNVWYK|AR 0.064 . Chro.40483 30 NVWYKAR|ND 0.091 . Chro.40483 33 YKARNDK|KH 0.098 . Chro.40483 34 KARNDKK|HP 0.098 . Chro.40483 39 KKHPYFK|GI 0.070 . Chro.40483 43 YFKGILR|LS 0.074 . Chro.40483 52 SAFNSFK|FI 0.085 . Chro.40483 79 PLIQDAK|LT 0.061 . Chro.40483 85 KLTFSPR|NS 0.096 . Chro.40483 113 SLYIIIK|TI 0.068 . Chro.40483 138 DSLFIYK|GL 0.060 . Chro.40483 143 YKGLLMK|KK 0.064 . Chro.40483 144 KGLLMKK|KE 0.065 . Chro.40483 145 GLLMKKK|ET 0.137 . Chro.40483 153 TMTSELK|AR 0.055 . Chro.40483 155 TSELKAR|EL 0.136 . Chro.40483 160 ARELSWR|II 0.128 . Chro.40483 171 NYPTLGR|QY 0.065 . Chro.40483 189 ELYNEFK|KF 0.060 . Chro.40483 190 LYNEFKK|FK 0.108 . Chro.40483 192 NEFKKFK|EN 0.063 . Chro.40483 207 FIGNLDR|AE 0.072 . Chro.40483 212 DRAELEK|LL 0.061 . Chro.40483 215 ELEKLLK|EF 0.060 . Chro.40483 220 LKEFSTR|VG 0.087 . Chro.40483 224 STRVGIK|AK 0.064 . Chro.40483 226 RVGIKAK|KE 0.060 . Chro.40483 227 VGIKAKK|EQ 0.083 . Chro.40483 232 KKEQCLK|LF 0.052 . Chro.40483 235 QCLKLFK|SR 0.069 . Chro.40483 237 LKLFKSR|SF 0.128 . Chro.40483 242 SRSFPIK|DF 0.101 . Chro.40483 245 FPIKDFR|GT 0.106 . Chro.40483 250 FRGTANK|VF 0.059 . Chro.40483 257 VFYHYNR|PD 0.079 . Chro.40483 265 DYFELSK|NY 0.057 . Chro.40483 275 NSNLDEK|AM 0.061 . Chro.40483 278 LDEKAMK|KL 0.079 . Chro.40483 279 DEKAMKK|LD 0.072 . Chro.40483 283 MKKLDTK|FS 0.071 . Chro.40483 291 SIENLFK|LL 0.066 . Chro.40483 308 CTNEVMR|SG 0.116 . Chro.40483 315 SGYLDFK|LS 0.063 . Chro.40483 334 LDIIIYK|NI 0.064 . Chro.40483 366 WLNESLK|MT 0.082 . Chro.40483 375 SESLSLK|TF 0.075 . Chro.40483 386 AFDSYYK|WS 0.056 . Chro.40483 407 LGLYISK|FT 0.066 . Chro.40483 411 ISKFTDK|YS 0.068 . Chro.40483 417 KYSNYLK|NG 0.060 . Chro.40483 425 GFGEDYK|AI 0.060 . Chro.40483 428 EDYKAIK|NL 0.061 . Chro.40483 434 KNLTISK|LK 0.059 . Chro.40483 436 LTISKLK|NK 0.053 . Chro.40483 438 ISKLKNK|LL 0.065 . Chro.40483 441 LKNKLLK|SD 0.119 . Chro.40483 452 EEFNSHK|FN 0.064 . Chro.40483 466 SVIESLK|EL 0.058 . Chro.40483 474 LDFFDFK|SK 0.070 . Chro.40483 476 FFDFKSK|MN 0.063 . Chro.40483 497 QVQSTEK|KD 0.051 . Chro.40483 498 VQSTEKK|DL 0.135 . Chro.40483 505 DLILACK|XS 0.057 . Chro.40483 514 NLYSESR|NP 0.077 . Chro.40483 517 SESRNPR|RN 0.266 . Chro.40483 518 ESRNPRR|NR 0.125 . Chro.40483 520 RNPRRNR|FX 0.376 . Chro.40483 523 RRNRFXR|I- 0.553 *ProP* ____________________________^_________________

  • Fasta :-

    >Chro.40483 ATGGTTCGAGATTGTCGTTTAGCTATATGTAAATATCATGATACACAAATTTCTATTTCT GAAAATGTTAATGTTTGGTATAAAGCTAGAAATGATAAGAAACATCCATATTTTAAAGGA ATATTAAGACTAAGTTCAGCTTTCAATTCTTTCAAATTTATTACTATGATATTGAGCTAT ATTTTAGTGATTTCAATGAATAATACTTTAAATTTACCTTTAATTCAAGATGCAAAGCTT ACATTTAGTCCAAGAAATAGTCCCGAACAACTTTCAAATGTTCCAAGCTTAGATTTACAT ATAAGTGGTTATAGTTCAAGTTTATATATTATTATTAAGACCATCCTTTCATCATTCAAT TCAGAAGAAGTTATTACAGAGACAGTTTTAAATGACTCATTATTCATTTATAAAGGATTA TTAATGAAAAAAAAAGAAACAATGACTTCAGAGCTTAAAGCAAGAGAACTTTCTTGGAGA ATAATTGCTCCAAATTATCCAACATTGGGTCGGCAATACTTAGGTTTAAGTCAAATAACT TATCAAGAATTATATAATGAATTTAAGAAATTTAAGGAGAATTTATGTATTGATGGATTA TTTATAGGTAACTTGGATAGAGCGGAATTAGAGAAATTATTAAAGGAATTTTCGACTAGA GTTGGTATTAAAGCTAAAAAAGAGCAATGTCTTAAATTATTTAAGAGTAGATCTTTCCCA ATTAAGGATTTTCGTGGTACAGCTAATAAAGTATTTTATCATTATAATCGTCCAGATTAT TTTGAGTTGTCAAAGAATTATATTAATTCAAATTTAGATGAAAAAGCAATGAAGAAACTT GATACAAAGTTTTCAATTGAGAATCTATTTAAGTTATTAAATGAGGAATGTGGTCAGATT AATTGTACAAATGAGGTAATGAGGAGTGGTTACTTGGATTTTAAATTAAGTTCGGATGAA TTTGGTCCAAATATTGCTTTATTGGATATCATCATCTATAAGAATATTCAGGATTTTTAT ACTGACAATGTTGATATCGGAATTTTATATTTAAATGATGCCTATTACAATACATACTGG CTTAATGAGTCTTTAAAAATGACAAGTGAAAGTTTGAGTTTAAAGACATTCATTGAGGCA TTTGATAGTTATTATAAATGGAGTGTTCAATTAGAGTCTTGGGATTACTCAGCTAATGAT TTGGGGTTATATATATCTAAATTTACAGATAAATATAGTAATTACCTCAAGAATGGTTTT GGAGAGGATTATAAGGCGATAAAGAATTTAACTATTTCAAAGCTCAAGAATAAGTTGTTA AAATCGGATATTGATGAAGAGTTTAATAGTCATAAGTTTAATCTTGGGTATTCGGAATCA GTAATAGAAAGTCTTAAGGAGCTTGATTTTTTCGACTTTAAATCCAAAATGAATCATATT TTAAACGATTATGCTTCATTCCTTCTTGTTCAAGTTCAATCTACTGAAAAGAAAGATTTA ATTTTAGCTTGTAAATNCTCAAATTTGTATTCAGAAAGTAGAAATCCGAGAAGAAATAGA TTTNACAGAATATGA
  • Download Fasta

  • Fasta :-

    MVRDCRLAICKYHDTQISISENVNVWYKARNDKKHPYFKGILRLSSAFNSFKFITMILSY ILVISMNNTLNLPLIQDAKLTFSPRNSPEQLSNVPSLDLHISGYSSSLYIIIKTILSSFN SEEVITETVLNDSLFIYKGLLMKKKETMTSELKARELSWRIIAPNYPTLGRQYLGLSQIT YQELYNEFKKFKENLCIDGLFIGNLDRAELEKLLKEFSTRVGIKAKKEQCLKLFKSRSFP IKDFRGTANKVFYHYNRPDYFELSKNYINSNLDEKAMKKLDTKFSIENLFKLLNEECGQI NCTNEVMRSGYLDFKLSSDEFGPNIALLDIIIYKNIQDFYTDNVDIGILYLNDAYYNTYW LNESLKMTSESLSLKTFIEAFDSYYKWSVQLESWDYSANDLGLYISKFTDKYSNYLKNGF GEDYKAIKNLTISKLKNKLLKSDIDEEFNSHKFNLGYSESVIESLKELDFFDFKSKMNHI LNDYASFLLVQVQSTEKKDLILACKXSNLYSESRNPRRNRFXRI

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
Chro.40483442 SKLLKSDIDE0.993unspChro.40483442 SKLLKSDIDE0.993unspChro.40483442 SKLLKSDIDE0.993unspChro.40483464 SSVIESLKEL0.995unspChro.4048383 SKLTFSPRNS0.994unspChro.4048387 SSPRNSPEQL0.997unsp

Chro.40483      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India