Chro.40502 | hypothetical protein

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_IDPredictionOTHERSPmTPCS_Position
Chro.40502OTHER0.9430250.0560260.000950
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  • Fasta :-

    >Chro.40502 MEPFVLASVENTDITFEEYCDNIRNTNEWGGEVELVALSNSLEVPITVIRALNH
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/519 Sequence name : 519 Sequence length : 54 VALUES OF COMPUTED PARAMETERS Coef20 : 3.513 CoefTot : 0.000 ChDiff : -8 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.447 1.447 -0.040 0.504 MesoH : -1.322 -1.322 -1.322 -1.322 MuHd_075 : 20.390 17.130 5.846 3.926 MuHd_095 : 34.518 12.536 7.700 2.948 MuHd_100 : 29.797 11.298 6.448 2.435 MuHd_105 : 17.607 6.618 3.822 1.087 Hmax_075 : 5.833 13.417 0.367 4.678 Hmax_095 : 17.800 14.400 2.230 5.010 Hmax_100 : 16.400 10.900 1.720 3.860 Hmax_105 : 5.483 12.600 -0.039 4.328 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9993 0.0007 DFMC : 0.9990 0.0010
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 54 Chro.40502 MEPFVLASVENTDITFEEYCDNIRNTNEWGGEVELVALSNSLEVPITVIRALNH 80 ...................................................... 80 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Chro.40502 24 EYCDNIR|NT 0.075 . Chro.40502 50 VPITVIR|AL 0.093 . ____________________________^_________________

  • Fasta :-

    >Chro.40502 ATGGAACCTTTTGTTCTAGCCTCAGTTGAGAATACAGATATAACATTTGAAGAATACTGT GACAATATTAGAAATACCAATGAATGGGGAGGTGAGGTTGAATTAGTTGCTCTTTCTAAC TCTCTGGAAGTTCCCATTACAGTTATTAGAGCATTAAATCACAG
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  • Fasta :-

    MEPFVLASVENTDITFEEYCDNIRNTNEWGGEVELVALSNSLEVPITVIRALNH

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Chro.40502      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India