Chro.50116 | leucine aminopeptidase

  • Computed_GO_Component_IDs:  GO:0005622      

  • Computed_GO_Components:  intracellular      

  • Computed_GO_Function_IDs:  GO:0004177      

  • Computed_GO_Functions:  aminopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
Chro.50116OTHER0.9999720.0000260.000002
No Results

  • Fasta :-

    >Chro.50116 MVNPIHPECIPMSEFNESLKFEFSVLKDKYDESLKGDCLVLCVPSKDIMQSIPSFYESLD TILNGILKDIIETANQESSLKDENNTIHVNLPPKYPFKYLMLISFDENKNTSPVFFNKMI TQMNEFQKKNKNIQSFTVVLGFDNVVSSDVMYFCTQFPIDNTIEKRFKGNIVGSEPKKPT KKIERIHFVLRSEDTIKDCNSRVLDAQFVSRGLLFARDLTSAPPNYCDPVNMAKEVISMA KSVGLEGKILQTKECEELKMGAFLAVAQGSKSPAQFVHLTYKPKGEIKKRIALVGKGITM DTGGYNIKHQMIHFMKGDMGGAAAVFGTALSVGLIKPENIEVHFISAICDNLVSRDAYLP GCIITASNGKTIEVGNTDAEGRLTLADALVYACNLKVETVIDLATLTGANYKLFEGRYAS VLGNNDELFQMIQTCGKTVYEKFWQLPLDPEFQEMVKSEIADLNNTSEGKAPISTSAAFL CEFVDKNVKYAHIDIAGCSGMGTFGNGFGVKTLVTIIKELSSKC
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/597 Sequence name : 597 Sequence length : 524 VALUES OF COMPUTED PARAMETERS Coef20 : 3.149 CoefTot : -0.879 ChDiff : -6 ZoneTo : 7 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.953 1.724 0.337 0.695 MesoH : -0.212 0.541 -0.250 0.301 MuHd_075 : 22.698 18.009 7.084 5.301 MuHd_095 : 9.948 11.291 3.699 1.490 MuHd_100 : 19.975 15.951 5.940 3.286 MuHd_105 : 23.245 18.582 6.948 4.189 Hmax_075 : 11.783 14.817 2.180 5.087 Hmax_095 : 3.150 8.838 -0.127 3.071 Hmax_100 : 10.300 10.700 1.663 3.380 Hmax_105 : 11.667 14.467 2.418 4.530 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9776 0.0224 DFMC : 0.9648 0.0352
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 524 Chro.50116 MVNPIHPECIPMSEFNESLKFEFSVLKDKYDESLKGDCLVLCVPSKDIMQSIPSFYESLDTILNGILKDIIETANQESSL 80 KDENNTIHVNLPPKYPFKYLMLISFDENKNTSPVFFNKMITQMNEFQKKNKNIQSFTVVLGFDNVVSSDVMYFCTQFPID 160 NTIEKRFKGNIVGSEPKKPTKKIERIHFVLRSEDTIKDCNSRVLDAQFVSRGLLFARDLTSAPPNYCDPVNMAKEVISMA 240 KSVGLEGKILQTKECEELKMGAFLAVAQGSKSPAQFVHLTYKPKGEIKKRIALVGKGITMDTGGYNIKHQMIHFMKGDMG 320 GAAAVFGTALSVGLIKPENIEVHFISAICDNLVSRDAYLPGCIITASNGKTIEVGNTDAEGRLTLADALVYACNLKVETV 400 IDLATLTGANYKLFEGRYASVLGNNDELFQMIQTCGKTVYEKFWQLPLDPEFQEMVKSEIADLNNTSEGKAPISTSAAFL 480 CEFVDKNVKYAHIDIAGCSGMGTFGNGFGVKTLVTIIKELSSKC 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ............................................ 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Chro.50116 20 EFNESLK|FE 0.071 . Chro.50116 27 FEFSVLK|DK 0.063 . Chro.50116 29 FSVLKDK|YD 0.064 . Chro.50116 35 KYDESLK|GD 0.059 . Chro.50116 46 VLCVPSK|DI 0.097 . Chro.50116 68 ILNGILK|DI 0.075 . Chro.50116 81 NQESSLK|DE 0.062 . Chro.50116 94 HVNLPPK|YP 0.076 . Chro.50116 98 PPKYPFK|YL 0.072 . Chro.50116 109 ISFDENK|NT 0.076 . Chro.50116 118 SPVFFNK|MI 0.085 . Chro.50116 128 QMNEFQK|KN 0.070 . Chro.50116 129 MNEFQKK|NK 0.118 . Chro.50116 131 EFQKKNK|NI 0.067 . Chro.50116 165 IDNTIEK|RF 0.062 . Chro.50116 166 DNTIEKR|FK 0.259 . Chro.50116 168 TIEKRFK|GN 0.068 . Chro.50116 177 IVGSEPK|KP 0.061 . Chro.50116 178 VGSEPKK|PT 0.159 . Chro.50116 181 EPKKPTK|KI 0.078 . Chro.50116 182 PKKPTKK|IE 0.088 . Chro.50116 185 PTKKIER|IH 0.080 . Chro.50116 191 RIHFVLR|SE 0.166 . Chro.50116 197 RSEDTIK|DC 0.067 . Chro.50116 202 IKDCNSR|VL 0.101 . Chro.50116 211 DAQFVSR|GL 0.098 . Chro.50116 217 RGLLFAR|DL 0.118 . Chro.50116 234 DPVNMAK|EV 0.079 . Chro.50116 241 EVISMAK|SV 0.131 . Chro.50116 248 SVGLEGK|IL 0.078 . Chro.50116 253 GKILQTK|EC 0.066 . Chro.50116 259 KECEELK|MG 0.055 . Chro.50116 271 AVAQGSK|SP 0.068 . Chro.50116 282 FVHLTYK|PK 0.072 . Chro.50116 284 HLTYKPK|GE 0.072 . Chro.50116 288 KPKGEIK|KR 0.064 . Chro.50116 289 PKGEIKK|RI 0.104 . Chro.50116 290 KGEIKKR|IA 0.223 . Chro.50116 296 RIALVGK|GI 0.077 . Chro.50116 308 TGGYNIK|HQ 0.067 . Chro.50116 316 QMIHFMK|GD 0.076 . Chro.50116 336 LSVGLIK|PE 0.064 . Chro.50116 355 CDNLVSR|DA 0.111 . Chro.50116 370 ITASNGK|TI 0.072 . Chro.50116 382 NTDAEGR|LT 0.071 . Chro.50116 396 VYACNLK|VE 0.056 . Chro.50116 412 LTGANYK|LF 0.061 . Chro.50116 417 YKLFEGR|YA 0.130 . Chro.50116 437 MIQTCGK|TV 0.083 . Chro.50116 442 GKTVYEK|FW 0.064 . Chro.50116 457 EFQEMVK|SE 0.072 . Chro.50116 470 NNTSEGK|AP 0.056 . Chro.50116 486 LCEFVDK|NV 0.075 . Chro.50116 489 FVDKNVK|YA 0.064 . Chro.50116 511 GNGFGVK|TL 0.069 . Chro.50116 518 TLVTIIK|EL 0.069 . Chro.50116 523 IKELSSK|C- 0.065 . ____________________________^_________________

  • Fasta :-

    >Chro.50116 ATGGTAAATCCAATACATCCAGAATGCATTCCAATGTCGGAATTTAATGAATCGTTAAAA TTTGAATTTTCAGTCTTAAAAGACAAATATGACGAAAGCTTAAAAGGGGATTGTCTCGTA TTATGCGTTCCAAGTAAAGATATTATGCAAAGTATACCTTCATTTTACGAATCTTTAGAC ACTATTTTAAATGGAATACTTAAAGATATTATAGAAACGGCAAATCAAGAATCATCTCTT AAAGATGAAAATAATACAATTCATGTGAATTTGCCTCCAAAATACCCGTTTAAGTATTTG ATGTTAATATCATTTGATGAAAATAAGAATACAAGTCCAGTATTTTTCAATAAAATGATA ACTCAAATGAATGAATTCCAGAAAAAAAATAAGAATATTCAAAGTTTTACAGTTGTTCTT GGCTTTGATAATGTGGTATCTTCAGATGTTATGTATTTCTGTACTCAGTTTCCAATTGAT AACACAATTGAAAAGAGATTTAAAGGAAACATTGTAGGCTCTGAGCCAAAGAAACCAACA AAGAAGATTGAAAGAATCCATTTTGTTCTTAGGTCAGAAGATACTATAAAGGACTGTAAT AGTAGAGTTTTGGATGCTCAATTTGTTTCTAGGGGTTTATTATTCGCAAGAGATCTTACA TCTGCTCCTCCAAATTATTGTGACCCAGTCAATATGGCAAAAGAAGTTATTAGTATGGCA AAATCTGTTGGGCTTGAAGGAAAGATTCTTCAAACAAAAGAATGCGAAGAACTCAAGATG GGAGCTTTTCTAGCTGTTGCACAGGGTAGCAAGTCTCCAGCTCAATTTGTCCATCTTACT TATAAACCAAAGGGGGAGATTAAAAAAAGAATTGCCTTAGTAGGTAAGGGAATTACTATG GATACTGGTGGATACAATATTAAGCATCAAATGATTCATTTTATGAAGGGAGATATGGGA GGTGCTGCTGCTGTTTTTGGCACAGCTCTCTCAGTTGGACTAATTAAGCCAGAGAATATT GAAGTTCATTTCATTTCCGCAATATGTGATAATTTGGTCTCCAGGGATGCTTATTTACCA GGGTGTATTATCACTGCCTCTAATGGAAAAACCATTGAAGTTGGTAATACTGACGCAGAG GGAAGACTCACTCTAGCTGATGCCCTTGTCTATGCTTGTAACCTCAAAGTCGAGACTGTC ATAGATTTGGCTACATTGACAGGGGCTAACTATAAGCTCTTTGAGGGCAGATATGCTTCT GTTCTTGGAAATAATGACGAATTATTCCAGATGATTCAAACATGCGGCAAAACTGTTTAT GAGAAATTCTGGCAGTTACCTTTGGACCCAGAATTTCAAGAAATGGTCAAATCTGAAATT GCTGACCTAAATAATACTTCTGAAGGAAAGGCCCCAATTTCTACCTCAGCTGCCTTTTTG TGCGAGTTTGTAGACAAGAATGTGAAATATGCCCACATTGATATTGCTGGTTGTTCTGGA ATGGGAACCTTTGGTAATGGCTTTGGCGTCAAGACTTTAGTCACTATTATTAAAGAGCTT TCCTCAAAATGTTGA
  • Download Fasta

  • Fasta :-

    MVNPIHPECIPMSEFNESLKFEFSVLKDKYDESLKGDCLVLCVPSKDIMQSIPSFYESLD TILNGILKDIIETANQESSLKDENNTIHVNLPPKYPFKYLMLISFDENKNTSPVFFNKMI TQMNEFQKKNKNIQSFTVVLGFDNVVSSDVMYFCTQFPIDNTIEKRFKGNIVGSEPKKPT KKIERIHFVLRSEDTIKDCNSRVLDAQFVSRGLLFARDLTSAPPNYCDPVNMAKEVISMA KSVGLEGKILQTKECEELKMGAFLAVAQGSKSPAQFVHLTYKPKGEIKKRIALVGKGITM DTGGYNIKHQMIHFMKGDMGGAAAVFGTALSVGLIKPENIEVHFISAICDNLVSRDAYLP GCIITASNGKTIEVGNTDAEGRLTLADALVYACNLKVETVIDLATLTGANYKLFEGRYAS VLGNNDELFQMIQTCGKTVYEKFWQLPLDPEFQEMVKSEIADLNNTSEGKAPISTSAAFL CEFVDKNVKYAHIDIAGCSGMGTFGNGFGVKTLVTIIKELSSKC

  • title: Substrate-binding/catalytic site
  • coordinates: K296,D301,K308,D318,D378,E380,R382,L406
No Results
No Results
IDSitePeptideScoreMethod
Chro.5011679 SNQESSLKDE0.994unsp

Chro.50116      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India