Chro.50128 | USP31 protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

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  • Curated_GO_Function_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
Chro.50128OTHER0.9919870.0046970.003316
No Results

  • Fasta :-

    >Chro.50128 MLGGTLNAGIGGTGFNMGVAEHSSVEKSGSISETPIIHSVTTPETPMTALNQASPISLTP LAPLGVLNPIPQFGVGLSPLNGLSGLSSPLVQHQLQLQNLYNLIYCNKQGHLQSQLIPSS GAGNGNFTNIEEFNHLVSREITNEGHKTKSIDEFSDDSTLVKSSLGSTATITPSKIQESQ GSSNISTTPNLGNEPNIFGSCNGNNNNAILSQYIQYLQFIQGQQVLEANKNLILGSLLNQ GNSQQNQIQNQIQSQLQLQKHQEQMRLQQHFVGGQPGNDSSLLDKGQQSQTRFPLINFQN SEEKGLKGGGAPANQNSKLKLPSQKLDSKLDSSTTEQCNHSKKRWKWVHFDDSEVQEWTP KFSLCNNSNINRMVTRTGYMLIYKRKDWAPHQPTCNTGITNACTDVDTNMGLVPGMSLGG DLGVKECERNLILKKLSVLNLRKQNVTYLKNVILRPSIDRWREEWTKRLEASKDDDNELV KNYLFGGFLAIPNDWWMCYVHGDDLEKILCHNSGEFIKFWSYENLYCKHSVVEGGKQGKH EEAEGSKFLDPFLFWEGRVKLFPPELLSALAECISKENSLLRDYYSLDDGYVTNDSVKQD NSKKADTLNFDSETQVECLNLSKSMCLKCVESLYGILNISLKQSRIIYEIMRTDIANESE VCLTSTRMFNSLIAKFDLKHKNPMQMFQRKQSQLNDKFGIVSKNESSTIDFDYNWRSIFT DIKRDIQRNGNTSEQMLLQLHNASDSHSFQAASIESGLYKSTNRVQDWSKDIALGSAKCP HGSYVRSKVSGKTVILIPLRLLEEFMSLEEQRSRKITSFVLFNKVKKDKEEIIASIYKKY LRYKCSNKLLPCKHCTTP
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/257 Sequence name : 257 Sequence length : 858 VALUES OF COMPUTED PARAMETERS Coef20 : 3.209 CoefTot : -1.492 ChDiff : 4 ZoneTo : 20 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.153 1.241 0.098 0.588 MesoH : 0.459 0.386 -0.165 0.324 MuHd_075 : 13.041 13.348 4.801 3.665 MuHd_095 : 9.854 11.084 2.949 2.679 MuHd_100 : 2.750 6.102 1.021 0.982 MuHd_105 : 5.643 7.190 1.538 1.371 Hmax_075 : 16.000 16.000 3.086 5.850 Hmax_095 : 16.538 12.338 2.406 4.926 Hmax_100 : 15.300 12.500 2.590 5.150 Hmax_105 : 14.700 11.100 2.275 4.930 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9202 0.0798 DFMC : 0.9500 0.0500
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 858 Chro.50128 MLGGTLNAGIGGTGFNMGVAEHSSVEKSGSISETPIIHSVTTPETPMTALNQASPISLTPLAPLGVLNPIPQFGVGLSPL 80 NGLSGLSSPLVQHQLQLQNLYNLIYCNKQGHLQSQLIPSSGAGNGNFTNIEEFNHLVSREITNEGHKTKSIDEFSDDSTL 160 VKSSLGSTATITPSKIQESQGSSNISTTPNLGNEPNIFGSCNGNNNNAILSQYIQYLQFIQGQQVLEANKNLILGSLLNQ 240 GNSQQNQIQNQIQSQLQLQKHQEQMRLQQHFVGGQPGNDSSLLDKGQQSQTRFPLINFQNSEEKGLKGGGAPANQNSKLK 320 LPSQKLDSKLDSSTTEQCNHSKKRWKWVHFDDSEVQEWTPKFSLCNNSNINRMVTRTGYMLIYKRKDWAPHQPTCNTGIT 400 NACTDVDTNMGLVPGMSLGGDLGVKECERNLILKKLSVLNLRKQNVTYLKNVILRPSIDRWREEWTKRLEASKDDDNELV 480 KNYLFGGFLAIPNDWWMCYVHGDDLEKILCHNSGEFIKFWSYENLYCKHSVVEGGKQGKHEEAEGSKFLDPFLFWEGRVK 560 LFPPELLSALAECISKENSLLRDYYSLDDGYVTNDSVKQDNSKKADTLNFDSETQVECLNLSKSMCLKCVESLYGILNIS 640 LKQSRIIYEIMRTDIANESEVCLTSTRMFNSLIAKFDLKHKNPMQMFQRKQSQLNDKFGIVSKNESSTIDFDYNWRSIFT 720 DIKRDIQRNGNTSEQMLLQLHNASDSHSFQAASIESGLYKSTNRVQDWSKDIALGSAKCPHGSYVRSKVSGKTVILIPLR 800 LLEEFMSLEEQRSRKITSFVLFNKVKKDKEEIIASIYKKYLRYKCSNKLLPCKHCTTP 880 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 .......................................................... 880 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Chro.50128 27 EHSSVEK|SG 0.106 . Chro.50128 108 NLIYCNK|QG 0.058 . Chro.50128 139 FNHLVSR|EI 0.117 . Chro.50128 147 ITNEGHK|TK 0.063 . Chro.50128 149 NEGHKTK|SI 0.117 . Chro.50128 162 DDSTLVK|SS 0.084 . Chro.50128 175 ATITPSK|IQ 0.064 . Chro.50128 230 QVLEANK|NL 0.052 . Chro.50128 260 SQLQLQK|HQ 0.071 . Chro.50128 266 KHQEQMR|LQ 0.088 . Chro.50128 285 DSSLLDK|GQ 0.070 . Chro.50128 292 GQQSQTR|FP 0.099 . Chro.50128 304 FQNSEEK|GL 0.071 . Chro.50128 307 SEEKGLK|GG 0.066 . Chro.50128 318 PANQNSK|LK 0.058 . Chro.50128 320 NQNSKLK|LP 0.087 . Chro.50128 325 LKLPSQK|LD 0.066 . Chro.50128 329 SQKLDSK|LD 0.061 . Chro.50128 342 EQCNHSK|KR 0.064 . Chro.50128 343 QCNHSKK|RW 0.125 . Chro.50128 344 CNHSKKR|WK 0.326 . Chro.50128 346 HSKKRWK|WV 0.090 . Chro.50128 361 VQEWTPK|FS 0.059 . Chro.50128 372 NNSNINR|MV 0.167 . Chro.50128 376 INRMVTR|TG 0.086 . Chro.50128 384 GYMLIYK|RK 0.066 . Chro.50128 385 YMLIYKR|KD 0.096 . Chro.50128 386 MLIYKRK|DW 0.173 . Chro.50128 425 GGDLGVK|EC 0.057 . Chro.50128 429 GVKECER|NL 0.072 . Chro.50128 434 ERNLILK|KL 0.068 . Chro.50128 435 RNLILKK|LS 0.076 . Chro.50128 442 LSVLNLR|KQ 0.065 . Chro.50128 443 SVLNLRK|QN 0.075 . Chro.50128 450 QNVTYLK|NV 0.063 . Chro.50128 455 LKNVILR|PS 0.098 . Chro.50128 460 LRPSIDR|WR 0.083 . Chro.50128 462 PSIDRWR|EE 0.081 . Chro.50128 467 WREEWTK|RL 0.070 . Chro.50128 468 REEWTKR|LE 0.132 . Chro.50128 473 KRLEASK|DD 0.073 . Chro.50128 481 DDNELVK|NY 0.059 . Chro.50128 507 HGDDLEK|IL 0.059 . Chro.50128 518 NSGEFIK|FW 0.076 . Chro.50128 528 YENLYCK|HS 0.064 . Chro.50128 536 SVVEGGK|QG 0.063 . Chro.50128 539 EGGKQGK|HE 0.076 . Chro.50128 547 EEAEGSK|FL 0.077 . Chro.50128 558 FLFWEGR|VK 0.063 . Chro.50128 560 FWEGRVK|LF 0.060 . Chro.50128 576 LAECISK|EN 0.059 . Chro.50128 582 KENSLLR|DY 0.107 . Chro.50128 598 VTNDSVK|QD 0.063 . Chro.50128 603 VKQDNSK|KA 0.075 . Chro.50128 604 KQDNSKK|AD 0.097 . Chro.50128 623 ECLNLSK|SM 0.061 . Chro.50128 628 SKSMCLK|CV 0.097 . Chro.50128 642 ILNISLK|QS 0.072 . Chro.50128 645 ISLKQSR|II 0.107 . Chro.50128 652 IIYEIMR|TD 0.087 . Chro.50128 667 VCLTSTR|MF 0.071 . Chro.50128 675 FNSLIAK|FD 0.071 . Chro.50128 679 IAKFDLK|HK 0.066 . Chro.50128 681 KFDLKHK|NP 0.060 . Chro.50128 689 PMQMFQR|KQ 0.098 . Chro.50128 690 MQMFQRK|QS 0.088 . Chro.50128 697 QSQLNDK|FG 0.069 . Chro.50128 703 KFGIVSK|NE 0.061 . Chro.50128 716 DFDYNWR|SI 0.100 . Chro.50128 723 SIFTDIK|RD 0.058 . Chro.50128 724 IFTDIKR|DI 0.219 . Chro.50128 728 IKRDIQR|NG 0.114 . Chro.50128 760 IESGLYK|ST 0.134 . Chro.50128 764 LYKSTNR|VQ 0.077 . Chro.50128 770 RVQDWSK|DI 0.068 . Chro.50128 778 IALGSAK|CP 0.065 . Chro.50128 786 PHGSYVR|SK 0.097 . Chro.50128 788 GSYVRSK|VS 0.081 . Chro.50128 792 RSKVSGK|TV 0.079 . Chro.50128 800 VILIPLR|LL 0.073 . Chro.50128 812 MSLEEQR|SR 0.098 . Chro.50128 814 LEEQRSR|KI 0.075 . Chro.50128 815 EEQRSRK|IT 0.331 . Chro.50128 824 SFVLFNK|VK 0.064 . Chro.50128 826 VLFNKVK|KD 0.064 . Chro.50128 827 LFNKVKK|DK 0.200 . Chro.50128 829 NKVKKDK|EE 0.064 . Chro.50128 838 IIASIYK|KY 0.057 . Chro.50128 839 IASIYKK|YL 0.140 . Chro.50128 842 IYKKYLR|YK 0.079 . Chro.50128 844 KKYLRYK|CS 0.073 . Chro.50128 848 RYKCSNK|LL 0.059 . Chro.50128 853 NKLLPCK|HC 0.061 . ____________________________^_________________

  • Fasta :-

    >Chro.50128 ATGCTTGGAGGTACGTTAAACGCAGGGATAGGAGGAACAGGTTTTAATATGGGAGTTGCT GAGCATTCCTCTGTAGAGAAGAGCGGAAGCATAAGCGAGACACCTATAATACATTCAGTT ACTACTCCAGAAACTCCTATGACGGCCTTGAATCAGGCATCTCCAATTTCTCTCACGCCA TTGGCTCCTCTTGGAGTTTTGAATCCTATTCCACAATTTGGTGTAGGGTTGTCTCCTTTA AATGGATTATCTGGCCTAAGTTCTCCTTTAGTTCAGCACCAGCTACAGTTGCAGAACCTA TATAACTTGATTTACTGTAATAAACAGGGACATCTGCAATCACAGTTGATTCCAAGTTCA GGGGCTGGGAATGGAAACTTCACAAATATTGAAGAATTTAACCATTTGGTTAGTAGGGAG ATAACAAATGAAGGGCATAAAACCAAATCTATAGATGAATTCTCTGATGACTCAACCCTA GTAAAGTCCTCTCTGGGATCTACTGCAACAATAACTCCATCAAAGATCCAAGAATCTCAA GGATCATCAAACATCTCAACCACTCCGAATTTAGGGAACGAACCAAATATTTTTGGTAGC TGCAATGGTAATAATAACAACGCAATACTCAGCCAGTACATCCAATACTTGCAGTTCATT CAGGGCCAACAAGTCTTGGAAGCCAACAAAAACCTTATATTAGGCTCTCTATTAAACCAA GGAAATAGTCAGCAGAATCAAATCCAAAATCAAATTCAGAGCCAACTCCAGCTCCAAAAA CATCAGGAACAAATGAGATTACAACAACATTTTGTAGGTGGACAACCCGGAAATGACTCA TCCTTGTTGGATAAAGGACAACAAAGTCAAACTCGTTTTCCTCTAATCAACTTTCAAAAC TCTGAAGAAAAAGGTCTTAAGGGAGGAGGAGCACCAGCTAACCAAAATTCTAAACTGAAA TTACCTTCCCAAAAGCTTGACTCTAAATTAGACTCCAGCACAACTGAACAATGTAACCAT TCCAAAAAAAGATGGAAATGGGTACATTTTGATGATAGCGAAGTTCAGGAATGGACTCCC AAGTTTTCCCTCTGCAATAACTCTAATATCAATCGAATGGTCACTAGAACTGGGTATATG CTCATTTATAAAAGAAAAGATTGGGCGCCACACCAACCCACATGCAATACCGGTATTACT AATGCATGCACTGATGTGGACACAAATATGGGTTTAGTGCCAGGAATGTCACTAGGCGGG GATTTGGGTGTGAAAGAGTGCGAAAGGAATTTAATTTTGAAGAAGTTGAGTGTTTTGAAC TTGAGGAAGCAGAATGTAACATATTTAAAGAATGTTATATTAAGACCTTCTATAGATAGA TGGCGAGAAGAGTGGACTAAAAGACTTGAGGCATCAAAGGATGATGACAATGAGCTAGTT AAGAATTACTTGTTTGGTGGGTTTTTGGCAATACCCAATGATTGGTGGATGTGCTATGTT CACGGAGATGACTTAGAGAAGATTTTGTGTCATAACTCTGGTGAATTCATCAAATTTTGG AGCTATGAGAATTTATATTGCAAACATTCTGTAGTTGAAGGAGGAAAGCAAGGAAAACAT GAGGAAGCAGAAGGTAGTAAATTTTTAGACCCATTTTTGTTCTGGGAGGGACGGGTGAAG TTGTTTCCTCCTGAACTTCTTAGCGCTTTGGCTGAATGTATCTCCAAGGAAAACTCTCTG CTTAGGGATTACTATTCTTTGGATGATGGGTACGTAACCAATGACTCAGTTAAACAGGAC AATTCCAAGAAAGCAGATACTTTGAATTTTGATTCTGAAACTCAAGTTGAATGTTTGAAT TTGAGCAAGAGTATGTGCTTAAAATGCGTGGAAAGCTTATATGGAATTCTAAATATTTCT TTAAAGCAGTCAAGAATTATTTACGAGATTATGAGGACTGACATTGCTAATGAGAGCGAA GTCTGCTTGACCAGCACTAGGATGTTTAATAGCTTGATAGCAAAGTTTGACTTGAAGCAT AAAAATCCTATGCAAATGTTTCAAAGGAAACAAAGCCAACTTAATGATAAGTTTGGGATA GTTAGTAAGAACGAGAGCTCCACAATAGATTTTGATTATAACTGGAGGTCAATTTTTACT GATATTAAAAGAGATATTCAGAGAAATGGAAATACAAGTGAACAGATGCTTCTTCAACTT CATAATGCATCTGATTCACATTCTTTTCAGGCTGCAAGCATTGAAAGTGGATTATATAAA TCAACCAATAGGGTGCAGGATTGGTCAAAAGATATTGCATTAGGCTCGGCAAAATGTCCA CATGGATCATATGTGAGATCAAAAGTTTCTGGTAAGACGGTGATTTTGATTCCACTGAGG TTGTTAGAGGAGTTTATGTCATTGGAGGAGCAGAGGAGTAGAAAGATAACTTCCTTTGTA TTATTTAATAAAGTCAAAAAGGACAAAGAGGAGATTATTGCCAGTATTTACAAGAAATAT TTGAGATACAAGTGCAGTAACAAGCTGCTTCCGTGCAAACATTGTACAACGCCGTAA
  • Download Fasta

  • Fasta :-

    MLGGTLNAGIGGTGFNMGVAEHSSVEKSGSISETPIIHSVTTPETPMTALNQASPISLTP LAPLGVLNPIPQFGVGLSPLNGLSGLSSPLVQHQLQLQNLYNLIYCNKQGHLQSQLIPSS GAGNGNFTNIEEFNHLVSREITNEGHKTKSIDEFSDDSTLVKSSLGSTATITPSKIQESQ GSSNISTTPNLGNEPNIFGSCNGNNNNAILSQYIQYLQFIQGQQVLEANKNLILGSLLNQ GNSQQNQIQNQIQSQLQLQKHQEQMRLQQHFVGGQPGNDSSLLDKGQQSQTRFPLINFQN SEEKGLKGGGAPANQNSKLKLPSQKLDSKLDSSTTEQCNHSKKRWKWVHFDDSEVQEWTP KFSLCNNSNINRMVTRTGYMLIYKRKDWAPHQPTCNTGITNACTDVDTNMGLVPGMSLGG DLGVKECERNLILKKLSVLNLRKQNVTYLKNVILRPSIDRWREEWTKRLEASKDDDNELV KNYLFGGFLAIPNDWWMCYVHGDDLEKILCHNSGEFIKFWSYENLYCKHSVVEGGKQGKH EEAEGSKFLDPFLFWEGRVKLFPPELLSALAECISKENSLLRDYYSLDDGYVTNDSVKQD NSKKADTLNFDSETQVECLNLSKSMCLKCVESLYGILNISLKQSRIIYEIMRTDIANESE VCLTSTRMFNSLIAKFDLKHKNPMQMFQRKQSQLNDKFGIVSKNESSTIDFDYNWRSIFT DIKRDIQRNGNTSEQMLLQLHNASDSHSFQAASIESGLYKSTNRVQDWSKDIALGSAKCP HGSYVRSKVSGKTVILIPLRLLEEFMSLEEQRSRKITSFVLFNKVKKDKEEIIASIYKKY LRYKCSNKLLPCKHCTTP

    No Results
    No Results
IDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscore
Chro.50128T340.5550.097Chro.50128T450.5510.029Chro.50128T480.5350.345Chro.50128T420.5140.094
IDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscore
Chro.50128T340.5550.097Chro.50128T450.5510.029Chro.50128T480.5350.345Chro.50128T420.5140.094
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
Chro.50128333 SKLDSSTTEQ0.996unspChro.50128333 SKLDSSTTEQ0.996unspChro.50128333 SKLDSSTTEQ0.996unspChro.50128341 SQCNHSKKRW0.995unspChro.50128707 SKNESSTIDF0.995unspChro.50128807 SEEFMSLEEQ0.991unspChro.5012830 SEKSGSISET0.994unspChro.50128328 SQKLDSKLDS0.996unsp

Chro.50128      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India