Chro.50138 | hypothetical protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005524      GO:0004672      

  • Computed_GO_Functions:  ATP binding      protein kinase activity      

  • Computed_GO_Process_IDs:  GO:0006468      

  • Computed_GO_Processes:  protein phosphorylation      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

No Results
No Results

  • Fasta :-

    >Chro.50138 MNELDSWNRKWRTLWCWTHIYVHYKRAQIYTRNLPEEVKYTYWNSKHSQFAELIWRNISE LRGWWIKVGQFLSTRGDLLPREYVTYLSKLQDIMPCMEWNIVEGILKEELGKDIEKMFKE IQEKPIAAASISQVHKAVLNEEEKKVVIKVQYPNIQETLNHDMKNLEQLTWAFGLLEENS DSIHILNEWKSSANLELDFKNELKNQKRAYEMFEDSGIEIIIPKVYTEYTTEKILTMEYI KGFNILNKMLLKENRVNKRELLEILCDSFAYQIHIHGFFHGDPQPSNIFLVYDDLKRKYI PAILDWGMVKIFDKSKQIAFSK
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/102 Sequence name : 102 Sequence length : 322 VALUES OF COMPUTED PARAMETERS Coef20 : 4.368 CoefTot : -0.134 ChDiff : -2 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.318 0.741 -0.235 0.436 MesoH : -1.247 0.015 -0.613 0.139 MuHd_075 : 12.082 8.009 2.447 2.286 MuHd_095 : 20.748 7.520 2.950 5.613 MuHd_100 : 29.570 11.347 3.156 7.579 MuHd_105 : 36.154 15.278 4.349 8.990 Hmax_075 : -4.725 -2.100 -4.267 -0.035 Hmax_095 : 4.300 0.700 -3.904 3.840 Hmax_100 : 8.300 0.700 -3.450 3.840 Hmax_105 : 15.900 6.100 -1.326 5.220 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.4816 0.5184 DFMC : 0.6799 0.3201
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 322 Chro.50138 MNELDSWNRKWRTLWCWTHIYVHYKRAQIYTRNLPEEVKYTYWNSKHSQFAELIWRNISELRGWWIKVGQFLSTRGDLLP 80 REYVTYLSKLQDIMPCMEWNIVEGILKEELGKDIEKMFKEIQEKPIAAASISQVHKAVLNEEEKKVVIKVQYPNIQETLN 160 HDMKNLEQLTWAFGLLEENSDSIHILNEWKSSANLELDFKNELKNQKRAYEMFEDSGIEIIIPKVYTEYTTEKILTMEYI 240 KGFNILNKMLLKENRVNKRELLEILCDSFAYQIHIHGFFHGDPQPSNIFLVYDDLKRKYIPAILDWGMVKIFDKSKQIAF 320 SK 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .. 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Chro.50138 9 ELDSWNR|KW 0.074 . Chro.50138 10 LDSWNRK|WR 0.082 . Chro.50138 12 SWNRKWR|TL 0.440 . Chro.50138 25 HIYVHYK|RA 0.078 . Chro.50138 26 IYVHYKR|AQ 0.143 . Chro.50138 32 RAQIYTR|NL 0.091 . Chro.50138 39 NLPEEVK|YT 0.064 . Chro.50138 46 YTYWNSK|HS 0.066 . Chro.50138 56 FAELIWR|NI 0.093 . Chro.50138 62 RNISELR|GW 0.116 . Chro.50138 67 LRGWWIK|VG 0.056 . Chro.50138 75 GQFLSTR|GD 0.069 . Chro.50138 81 RGDLLPR|EY 0.075 . Chro.50138 89 YVTYLSK|LQ 0.059 . Chro.50138 107 IVEGILK|EE 0.051 . Chro.50138 112 LKEELGK|DI 0.093 . Chro.50138 116 LGKDIEK|MF 0.062 . Chro.50138 119 DIEKMFK|EI 0.064 . Chro.50138 124 FKEIQEK|PI 0.066 . Chro.50138 136 SISQVHK|AV 0.100 . Chro.50138 144 VLNEEEK|KV 0.068 . Chro.50138 145 LNEEEKK|VV 0.132 . Chro.50138 149 EKKVVIK|VQ 0.067 . Chro.50138 164 TLNHDMK|NL 0.084 . Chro.50138 190 HILNEWK|SS 0.072 . Chro.50138 200 NLELDFK|NE 0.053 . Chro.50138 204 DFKNELK|NQ 0.061 . Chro.50138 207 NELKNQK|RA 0.064 . Chro.50138 208 ELKNQKR|AY 0.250 . Chro.50138 224 IEIIIPK|VY 0.060 . Chro.50138 233 TEYTTEK|IL 0.063 . Chro.50138 241 LTMEYIK|GF 0.062 . Chro.50138 248 GFNILNK|ML 0.072 . Chro.50138 252 LNKMLLK|EN 0.060 . Chro.50138 255 MLLKENR|VN 0.083 . Chro.50138 258 KENRVNK|RE 0.098 . Chro.50138 259 ENRVNKR|EL 0.209 . Chro.50138 296 LVYDDLK|RK 0.052 . Chro.50138 297 VYDDLKR|KY 0.118 . Chro.50138 298 YDDLKRK|YI 0.107 . Chro.50138 310 LDWGMVK|IF 0.064 . Chro.50138 314 MVKIFDK|SK 0.082 . Chro.50138 316 KIFDKSK|QI 0.065 . Chro.50138 322 KQIAFSK|-- 0.069 . ____________________________^_________________

  • Fasta :-

    >Chro.50138 ATGAATGAGCTAGATTCTTGGAACAGAAAATGGAGAACATTATGGTGTTGGACTCATATA TATGTGCATTACAAAAGAGCTCAGATTTATACAAGAAATTTACCTGAGGAAGTAAAATAT ACATATTGGAATAGTAAGCATTCTCAGTTTGCTGAATTGATATGGAGAAATATATCAGAG TTACGAGGATGGTGGATTAAAGTGGGGCAGTTTTTGTCAACAAGAGGAGATTTACTTCCA AGAGAGTATGTGACATATTTGAGTAAATTACAAGATATAATGCCTTGTATGGAGTGGAAT ATTGTGGAAGGAATATTAAAGGAGGAATTAGGTAAGGATATTGAAAAAATGTTTAAAGAG ATACAAGAAAAACCAATTGCAGCAGCATCAATATCTCAAGTACATAAAGCAGTATTGAAT GAAGAAGAAAAAAAAGTAGTGATTAAAGTACAGTATCCAAATATTCAAGAGACTCTTAAT CATGATATGAAGAATTTGGAACAATTAACATGGGCTTTTGGTCTGTTAGAAGAAAATTCT GATTCTATTCATATTCTAAATGAATGGAAAAGCTCTGCGAATTTAGAACTTGATTTTAAG AATGAGCTAAAGAATCAAAAGAGAGCATATGAGATGTTTGAGGACTCAGGGATAGAAATA ATTATTCCGAAAGTTTATACAGAATATACTACTGAAAAGATATTAACAATGGAATATATT AAAGGTTTTAATATATTAAATAAAATGCTATTAAAAGAAAATAGAGTTAATAAAAGGGAA TTATTGGAAATATTATGTGATTCCTTTGCTTATCAGATTCATATTCATGGTTTTTTTCAT GGTGATCCTCAACCAAGTAATATTTTTTTGGTTTATGATGACTTAAAGAGAAAATACATT CCAGCAATTTTGGACTGGGGAATGGTTAAGATTTTTGATAAAAGTAAACAAATTGCATTT TCAAAGTAA
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  • Fasta :-

  • title: putative ATP binding site
  • coordinates: L139,N140,E141,E142,E143,V146,Q156,T158,G217,M237,E238,Y239,I240,D282,S286,N287,F289,L304,D305
No Results
No Results
No Results

Chro.50138      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India