Chro.60116 | CG16979 protein

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_IDPredictionOTHERSPmTPCS_Position
Chro.60116OTHER0.9982170.0012190.000564
No Results

  • Fasta :-

    >Chro.60116 MVFSWYLINNYTNKHILTIPEIQDFLRKNDPTHSNLEIGSKIWIGTVEASYLLMMYLGIS CKLKYFYNIEEFLKDYNAISDHFQNVSTPIILSIGDYSYLLVAIQISKDPSSPFNPNNVQ YLLVDPHYTGKDDPESIYKKNGVSWKNASFFKSISKDKYVNILLPLNISEKDSQIIY
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/127 Sequence name : 127 Sequence length : 177 VALUES OF COMPUTED PARAMETERS Coef20 : 3.906 CoefTot : -0.965 ChDiff : -2 ZoneTo : 20 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.276 1.665 0.180 0.642 MesoH : -0.303 0.442 -0.318 0.308 MuHd_075 : 28.380 27.783 10.675 7.564 MuHd_095 : 19.512 14.244 6.027 4.446 MuHd_100 : 14.199 8.084 3.975 2.992 MuHd_105 : 10.836 5.989 2.137 3.036 Hmax_075 : 19.300 22.900 4.253 7.250 Hmax_095 : 9.450 9.888 0.664 4.314 Hmax_100 : 10.000 7.900 -0.212 5.280 Hmax_105 : 10.100 8.225 -0.567 4.270 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7206 0.2794 DFMC : 0.8452 0.1548
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 177 Chro.60116 MVFSWYLINNYTNKHILTIPEIQDFLRKNDPTHSNLEIGSKIWIGTVEASYLLMMYLGISCKLKYFYNIEEFLKDYNAIS 80 DHFQNVSTPIILSIGDYSYLLVAIQISKDPSSPFNPNNVQYLLVDPHYTGKDDPESIYKKNGVSWKNASFFKSISKDKYV 160 NILLPLNISEKDSQIIY 240 ................................................................................ 80 ................................................................................ 160 ................. 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Chro.60116 14 INNYTNK|HI 0.077 . Chro.60116 27 EIQDFLR|KN 0.090 . Chro.60116 28 IQDFLRK|ND 0.066 . Chro.60116 41 NLEIGSK|IW 0.061 . Chro.60116 62 YLGISCK|LK 0.057 . Chro.60116 64 GISCKLK|YF 0.097 . Chro.60116 74 NIEEFLK|DY 0.073 . Chro.60116 108 VAIQISK|DP 0.059 . Chro.60116 131 DPHYTGK|DD 0.074 . Chro.60116 139 DPESIYK|KN 0.066 . Chro.60116 140 PESIYKK|NG 0.082 . Chro.60116 146 KNGVSWK|NA 0.081 . Chro.60116 152 KNASFFK|SI 0.115 . Chro.60116 156 FFKSISK|DK 0.062 . Chro.60116 158 KSISKDK|YV 0.099 . Chro.60116 171 PLNISEK|DS 0.073 . ____________________________^_________________

  • Fasta :-

    >Chro.60116 ATGGTATTTAGTTGGTACCTTATTAATAATTATACTAATAAACATATTTTGACAATACCA GAAATTCAAGATTTCTTAAGAAAAAATGATCCAACACATAGCAACCTTGAAATTGGATCA AAAATTTGGATTGGAACTGTTGAAGCTTCATATCTTTTAATGATGTATCTTGGAATTTCT TGTAAATTGAAATACTTTTATAATATTGAAGAATTTCTTAAAGATTATAATGCAATTTCT GATCATTTTCAAAATGTCTCAACACCAATAATTCTTAGTATTGGAGATTATTCGTATTTA TTAGTAGCAATTCAAATTTCAAAAGATCCTTCTTCTCCTTTTAACCCTAATAATGTCCAA TATTTGTTGGTAGATCCCCATTATACTGGAAAAGATGACCCTGAATCTATTTATAAAAAA AATGGAGTTTCTTGGAAGAATGCAAGCTTTTTCAAATCTATATCTAAAGATAAATATGTC AATATTTTATTACCTCTTAATATTTCCGAAAAAGATTCTCAGATTATTTATTAA
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  • Fasta :-

    MVFSWYLINNYTNKHILTIPEIQDFLRKNDPTHSNLEIGSKIWIGTVEASYLLMMYLGIS CKLKYFYNIEEFLKDYNAISDHFQNVSTPIILSIGDYSYLLVAIQISKDPSSPFNPNNVQ YLLVDPHYTGKDDPESIYKKNGVSWKNASFFKSISKDKYVNILLPLNISEKDSQIIY

    No Results
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No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
Chro.60116144 SKNGVSWKNA0.995unspChro.60116159 YSKDKYVNIL0.994unsp

Chro.60116      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India