Chro.60317 | cysteine protease

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_IDPredictionOTHERSPmTPCS_Position
Chro.60317OTHER0.9999600.0000130.000027
No Results

  • Fasta :-

    >Chro.60317 MKEECLLPYEVRVKNIEGDGNCLFRSIGSQLYGESEHHEIIRSACMDYVDLNKESFSGFV HEYSSIEKYIQEKRKLGVWADNIEVQALSDLYRVPIHIFEKIRNSKLNASLLEKHRLEGS SGAMSENIFYENKEFVYKLLCKIEPRHSSFLDQIKNYYSNSRPIRLLYYNDLHYDSLFYR KEHQTPIINKDIGIIEAESIKNLKVYRTIAKQKEKSSKFPVRGSKIKTDQVGHFNHTSYA LLRKKAIKKFPVNYGSSSESDNYVAKSPFFLSVKNKYRDEPESFFEGNYLDKISEGETHF EKLYLKSKELYSKFISRPKSFSERAIGKPACVSKIKSLNNTHLGVVDRYARDVQLSSHQK EFKKLLINDSPRLSSTPNPGKKCVAIYCPQNLKQSTFRN
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/338 Sequence name : 338 Sequence length : 399 VALUES OF COMPUTED PARAMETERS Coef20 : 2.903 CoefTot : -0.113 ChDiff : 17 ZoneTo : 2 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : -0.365 0.718 -0.217 0.314 MesoH : -1.717 -0.226 -0.667 0.030 MuHd_075 : 19.078 16.206 5.149 2.985 MuHd_095 : 13.983 7.394 5.786 1.122 MuHd_100 : 14.819 7.049 5.725 0.550 MuHd_105 : 9.140 5.615 4.103 1.476 Hmax_075 : -2.567 6.300 -1.335 1.878 Hmax_095 : -3.325 7.175 -1.371 2.231 Hmax_100 : -3.400 6.300 -1.703 1.920 Hmax_105 : -7.400 5.300 -2.010 1.890 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9939 0.0061 DFMC : 0.9939 0.0061
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 399 Chro.60317 MKEECLLPYEVRVKNIEGDGNCLFRSIGSQLYGESEHHEIIRSACMDYVDLNKESFSGFVHEYSSIEKYIQEKRKLGVWA 80 DNIEVQALSDLYRVPIHIFEKIRNSKLNASLLEKHRLEGSSGAMSENIFYENKEFVYKLLCKIEPRHSSFLDQIKNYYSN 160 SRPIRLLYYNDLHYDSLFYRKEHQTPIINKDIGIIEAESIKNLKVYRTIAKQKEKSSKFPVRGSKIKTDQVGHFNHTSYA 240 LLRKKAIKKFPVNYGSSSESDNYVAKSPFFLSVKNKYRDEPESFFEGNYLDKISEGETHFEKLYLKSKELYSKFISRPKS 320 FSERAIGKPACVSKIKSLNNTHLGVVDRYARDVQLSSHQKEFKKLLINDSPRLSSTPNPGKKCVAIYCPQNLKQSTFRN 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ............................................................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0

  • Fasta :-

    >Chro.60317 ATGAAAGAGGAATGCTTGCTTCCATATGAAGTGAGAGTGAAAAATATTGAAGGAGATGGT AACTGTTTGTTTAGGTCGATAGGAAGCCAGCTTTACGGAGAGAGTGAACACCATGAAATA ATTAGATCTGCCTGCATGGATTATGTAGATTTAAACAAGGAATCATTTTCCGGATTTGTA CATGAATATTCTTCAATTGAAAAATATATTCAAGAGAAGAGAAAGCTGGGGGTCTGGGCA GATAATATTGAAGTTCAAGCACTAAGTGATTTGTATCGTGTTCCAATACATATATTTGAA AAGATCAGAAATAGTAAACTGAATGCTAGCTTATTAGAGAAGCATAGACTGGAAGGCTCT TCTGGTGCTATGTCAGAAAATATTTTCTATGAGAACAAGGAATTTGTTTATAAGTTACTT TGTAAGATAGAGCCAAGGCATTCAAGTTTCCTTGACCAAATTAAGAATTATTATTCAAAT AGTAGGCCAATTAGATTGCTTTATTACAATGACCTACATTATGACTCCTTATTTTATAGA AAAGAGCATCAAACCCCAATAATTAACAAGGATATTGGAATAATTGAGGCTGAGAGCATT AAGAACCTTAAAGTTTACAGAACCATTGCAAAACAAAAAGAAAAAAGCAGTAAGTTTCCT GTTAGAGGCTCTAAAATAAAAACCGACCAGGTCGGTCATTTTAATCACACATCATATGCA CTACTAAGGAAGAAGGCAATTAAAAAGTTCCCTGTTAATTATGGATCTAGCAGTGAAAGT GATAACTATGTCGCAAAATCGCCATTTTTCCTATCCGTTAAGAATAAATACCGAGACGAG CCCGAATCATTTTTCGAGGGGAATTACCTAGATAAAATCTCTGAAGGTGAAACTCATTTT GAAAAGCTTTACCTCAAGAGCAAAGAGCTATATAGCAAGTTTATATCTAGGCCCAAATCA TTTTCCGAAAGGGCAATAGGAAAGCCCGCCTGTGTTTCAAAAATTAAGTCATTAAATAAT ACTCATTTGGGAGTAGTTGATAGATACGCCAGGGATGTTCAACTCTCTTCTCATCAAAAG GAATTTAAAAAGCTGTTGATTAACGATTCACCTCGATTATCTTCAACCCCAAATCCAGGA AAAAAGTGTGTTGCAATATATTGTCCACAAAATTTGAAACAAAGTACGTTTAGAAATTAA
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  • Fasta :-

    MKEECLLPYEVRVKNIEGDGNCLFRSIGSQLYGESEHHEIIRSACMDYVDLNKESFSGFV HEYSSIEKYIQEKRKLGVWADNIEVQALSDLYRVPIHIFEKIRNSKLNASLLEKHRLEGS SGAMSENIFYENKEFVYKLLCKIEPRHSSFLDQIKNYYSNSRPIRLLYYNDLHYDSLFYR KEHQTPIINKDIGIIEAESIKNLKVYRTIAKQKEKSSKFPVRGSKIKTDQVGHFNHTSYA LLRKKAIKKFPVNYGSSSESDNYVAKSPFFLSVKNKYRDEPESFFEGNYLDKISEGETHF EKLYLKSKELYSKFISRPKSFSERAIGKPACVSKIKSLNNTHLGVVDRYARDVQLSSHQK EFKKLLINDSPRLSSTPNPGKKCVAIYCPQNLKQSTFRN

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
Chro.60317224 SPVRGSKIKT0.992unspChro.60317224 SPVRGSKIKT0.992unspChro.60317224 SPVRGSKIKT0.992unspChro.60317258 SYGSSSESDN0.994unspChro.60317320 SSRPKSFSER0.997unspChro.60317374 SSPRLSSTPN0.993unspChro.60317199 SIEAESIKNL0.995unspChro.60317216 SQKEKSSKFP0.996unsp

Chro.60317      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India