Chro.60558 | subtilisin-like serine protease

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
Chro.60558OTHER0.9998290.0001170.000055
No Results

  • Fasta :-

    >Chro.60558 MGLEGTKTLIPISNSGIGTLEYMVEFVNMEGELGSKRKGKFKVYPPLGTILTVGEDQTNK DLQVSCIPHSLEGFISGHLMLRYNKGGMSSSSSSSFSSNKISAKSTKIPYVRSNLFTETS SIINTLSNNIISPNSNYILSSSSSSSFPVGTERLAIKLYCKGYGIEIRPPSINRVIRIPE TTISGFILFKGLENSFKPRIYLRFKSLRDPSSTGFERESKRKDYSRSSTSIKDLSPSKSY FKMVLSGENLPSKKRIIHRLEGMDSEEGKNKLYVSLDDVILPKANVKFDWVNIGVNQEII LTDLSNSDDGVQKVNLPRSWYFLGEKIDEIYVSVNGFISFSPIYSEAFVPALPSYAPPHG ILAPLWTDFTTRGRRENTKIVTFLKTEEDEDFGGGFGSGVGSRYRREERLEYEEEDEGEE KEEGRKRRWEFVIEWRNVFLKSEQYNSKSATFQCVLNSNGSVKFNYLSIPWEDLEDSRGI SSSEKGSLAISRISSSTMLGWESIDGIRGKLY
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/914 Sequence name : 914 Sequence length : 512 VALUES OF COMPUTED PARAMETERS Coef20 : 3.494 CoefTot : -1.143 ChDiff : 3 ZoneTo : 20 KR : 1 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.141 1.071 0.069 0.561 MesoH : -0.257 0.217 -0.307 0.275 MuHd_075 : 8.282 6.401 1.982 1.467 MuHd_095 : 22.096 16.481 6.955 4.776 MuHd_100 : 25.716 20.132 8.145 5.365 MuHd_105 : 26.595 19.138 8.018 4.798 Hmax_075 : 10.617 7.400 1.285 3.410 Hmax_095 : 14.175 15.000 3.389 5.780 Hmax_100 : 16.400 18.900 3.609 5.870 Hmax_105 : 14.600 16.188 3.298 5.556 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9665 0.0335 DFMC : 0.9733 0.0267
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 512 Chro.60558 MGLEGTKTLIPISNSGIGTLEYMVEFVNMEGELGSKRKGKFKVYPPLGTILTVGEDQTNKDLQVSCIPHSLEGFISGHLM 80 LRYNKGGMSSSSSSSFSSNKISAKSTKIPYVRSNLFTETSSIINTLSNNIISPNSNYILSSSSSSSFPVGTERLAIKLYC 160 KGYGIEIRPPSINRVIRIPETTISGFILFKGLENSFKPRIYLRFKSLRDPSSTGFERESKRKDYSRSSTSIKDLSPSKSY 240 FKMVLSGENLPSKKRIIHRLEGMDSEEGKNKLYVSLDDVILPKANVKFDWVNIGVNQEIILTDLSNSDDGVQKVNLPRSW 320 YFLGEKIDEIYVSVNGFISFSPIYSEAFVPALPSYAPPHGILAPLWTDFTTRGRRENTKIVTFLKTEEDEDFGGGFGSGV 400 GSRYRREERLEYEEEDEGEEKEEGRKRRWEFVIEWRNVFLKSEQYNSKSATFQCVLNSNGSVKFNYLSIPWEDLEDSRGI 480 SSSEKGSLAISRISSSTMLGWESIDGIRGKLY 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ...........................P.................................................... 480 ................................ 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ Chro.60558 7 MGLEGTK|TL 0.058 . Chro.60558 36 EGELGSK|RK 0.055 . Chro.60558 37 GELGSKR|KG 0.100 . Chro.60558 38 ELGSKRK|GK 0.123 . Chro.60558 40 GSKRKGK|FK 0.192 . Chro.60558 42 KRKGKFK|VY 0.075 . Chro.60558 60 GEDQTNK|DL 0.062 . Chro.60558 82 SGHLMLR|YN 0.104 . Chro.60558 85 LMLRYNK|GG 0.090 . Chro.60558 100 SSFSSNK|IS 0.066 . Chro.60558 104 SNKISAK|ST 0.092 . Chro.60558 107 ISAKSTK|IP 0.067 . Chro.60558 112 TKIPYVR|SN 0.134 . Chro.60558 153 FPVGTER|LA 0.085 . Chro.60558 157 TERLAIK|LY 0.075 . Chro.60558 161 AIKLYCK|GY 0.073 . Chro.60558 168 GYGIEIR|PP 0.092 . Chro.60558 174 RPPSINR|VI 0.102 . Chro.60558 177 SINRVIR|IP 0.377 . Chro.60558 190 SGFILFK|GL 0.071 . Chro.60558 197 GLENSFK|PR 0.061 . Chro.60558 199 ENSFKPR|IY 0.100 . Chro.60558 203 KPRIYLR|FK 0.112 . Chro.60558 205 RIYLRFK|SL 0.079 . Chro.60558 208 LRFKSLR|DP 0.133 . Chro.60558 217 SSTGFER|ES 0.083 . Chro.60558 220 GFERESK|RK 0.112 . Chro.60558 221 FERESKR|KD 0.125 . Chro.60558 222 ERESKRK|DY 0.135 . Chro.60558 226 KRKDYSR|SS 0.159 . Chro.60558 232 RSSTSIK|DL 0.124 . Chro.60558 238 KDLSPSK|SY 0.075 . Chro.60558 242 PSKSYFK|MV 0.079 . Chro.60558 253 GENLPSK|KR 0.061 . Chro.60558 254 ENLPSKK|RI 0.103 . Chro.60558 255 NLPSKKR|II 0.224 . Chro.60558 259 KKRIIHR|LE 0.090 . Chro.60558 269 MDSEEGK|NK 0.064 . Chro.60558 271 SEEGKNK|LY 0.061 . Chro.60558 283 DDVILPK|AN 0.058 . Chro.60558 287 LPKANVK|FD 0.067 . Chro.60558 313 SDDGVQK|VN 0.056 . Chro.60558 318 QKVNLPR|SW 0.125 . Chro.60558 326 WYFLGEK|ID 0.056 . Chro.60558 372 WTDFTTR|GR 0.085 . Chro.60558 374 DFTTRGR|RE 0.074 . Chro.60558 375 FTTRGRR|EN 0.334 . Chro.60558 379 GRRENTK|IV 0.083 . Chro.60558 385 KIVTFLK|TE 0.065 . Chro.60558 403 GSGVGSR|YR 0.093 . Chro.60558 405 GVGSRYR|RE 0.083 . Chro.60558 406 VGSRYRR|EE 0.373 . Chro.60558 409 RYRREER|LE 0.221 . Chro.60558 421 EDEGEEK|EE 0.067 . Chro.60558 425 EEKEEGR|KR 0.085 . Chro.60558 426 EKEEGRK|RR 0.061 . Chro.60558 427 KEEGRKR|RW 0.217 . Chro.60558 428 EEGRKRR|WE 0.587 *ProP* Chro.60558 436 EFVIEWR|NV 0.092 . Chro.60558 441 WRNVFLK|SE 0.088 . Chro.60558 448 SEQYNSK|SA 0.094 . Chro.60558 463 NSNGSVK|FN 0.085 . Chro.60558 478 EDLEDSR|GI 0.108 . Chro.60558 485 GISSSEK|GS 0.073 . Chro.60558 492 GSLAISR|IS 0.095 . Chro.60558 508 ESIDGIR|GK 0.073 . Chro.60558 510 IDGIRGK|LY 0.070 . ____________________________^_________________

  • Fasta :-

    >Chro.60558 ATGGGATTAGAAGGAACAAAAACATTGATTCCAATTTCTAATTCAGGTATTGGTACCTTA GAATATATGGTTGAATTTGTCAATATGGAAGGAGAATTAGGATCTAAAAGAAAAGGAAAG TTTAAAGTATATCCACCATTGGGTACCATATTAACAGTAGGTGAGGATCAGACAAACAAG GATCTTCAAGTGAGTTGTATTCCACACTCTTTAGAAGGATTTATAAGTGGTCATTTAATG TTGAGATATAACAAAGGAGGAATGTCATCTTCATCTTCTTCTTCATTTTCATCAAATAAG ATATCAGCCAAGTCTACAAAGATACCATATGTAAGAAGTAACTTATTTACAGAGACATCT TCAATAATAAATACTCTATCAAATAATATTATATCCCCAAATAGTAACTATATCTTGTCA TCATCTTCATCAAGTTCATTCCCAGTTGGAACTGAAAGACTTGCAATCAAACTTTATTGT AAAGGATATGGAATAGAAATTCGTCCTCCTTCAATTAATAGAGTAATTAGGATTCCAGAA ACAACAATTTCTGGTTTCATATTATTTAAAGGATTAGAGAATTCATTTAAGCCTAGAATT TACTTAAGATTTAAGTCTTTAAGAGATCCAAGTTCAACAGGATTTGAAAGAGAAAGTAAA AGAAAAGATTATTCAAGAAGTAGTACTTCTATTAAAGATCTATCTCCATCAAAATCTTAC TTTAAGATGGTTCTTTCTGGAGAGAATCTTCCTTCTAAGAAGAGGATTATTCATAGATTA GAAGGAATGGATTCTGAAGAAGGTAAAAATAAGTTATATGTATCTTTAGATGATGTGATT TTACCCAAGGCTAATGTAAAGTTTGATTGGGTAAATATTGGAGTTAATCAAGAAATAATT CTCACAGACTTATCTAACTCAGATGATGGAGTACAAAAAGTAAATCTTCCAAGAAGTTGG TACTTTCTTGGGGAGAAGATTGACGAGATTTATGTCTCAGTAAATGGATTTATTTCTTTC AGTCCAATATATAGTGAAGCATTTGTACCAGCATTACCCTCATATGCTCCTCCTCATGGT ATTTTAGCCCCTTTATGGACAGATTTCACAACAAGAGGAAGAAGAGAGAATACAAAAATT GTGACATTCTTAAAGACTGAAGAAGATGAGGATTTTGGAGGGGGATTTGGTAGTGGAGTT GGTAGTAGATATAGAAGAGAGGAAAGACTAGAGTATGAAGAAGAGGATGAAGGAGAAGAA AAGGAGGAGGGGAGGAAAAGGAGGTGGGAGTTTGTAATAGAATGGAGAAATGTATTTCTA AAATCTGAACAATACAATTCAAAATCAGCAACATTTCAATGTGTGTTGAACAGTAATGGA TCAGTGAAATTCAATTATTTGAGTATTCCCTGGGAGGATTTAGAAGATTCTAGAGGAATT TCATCCTCAGAGAAAGGAAGTTTGGCAATTAGTAGAATTTCATCTTCAACAATGCTTGGA TGGGAAAGTATTGATGGGATAAGAGGTAAGTTATATTAA
  • Download Fasta

  • Fasta :-

    MGLEGTKTLIPISNSGIGTLEYMVEFVNMEGELGSKRKGKFKVYPPLGTILTVGEDQTNK DLQVSCIPHSLEGFISGHLMLRYNKGGMSSSSSSSFSSNKISAKSTKIPYVRSNLFTETS SIINTLSNNIISPNSNYILSSSSSSSFPVGTERLAIKLYCKGYGIEIRPPSINRVIRIPE TTISGFILFKGLENSFKPRIYLRFKSLRDPSSTGFERESKRKDYSRSSTSIKDLSPSKSY FKMVLSGENLPSKKRIIHRLEGMDSEEGKNKLYVSLDDVILPKANVKFDWVNIGVNQEII LTDLSNSDDGVQKVNLPRSWYFLGEKIDEIYVSVNGFISFSPIYSEAFVPALPSYAPPHG ILAPLWTDFTTRGRRENTKIVTFLKTEEDEDFGGGFGSGVGSRYRREERLEYEEEDEGEE KEEGRKRRWEFVIEWRNVFLKSEQYNSKSATFQCVLNSNGSVKFNYLSIPWEDLEDSRGI SSSEKGSLAISRISSSTMLGWESIDGIRGKLY

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
Chro.60558206 SLRFKSLRDP0.996unspChro.60558206 SLRFKSLRDP0.996unspChro.60558206 SLRFKSLRDP0.996unspChro.60558219 SFERESKRKD0.994unspChro.60558228 SYSRSSTSIK0.994unspChro.60558230 SRSSTSIKDL0.998unspChro.60558235 SIKDLSPSKS0.992unspChro.60558481 SSRGISSSEK0.994unspChro.60558102 SSNKISAKST0.993unspChro.60558105 SISAKSTKIP0.992unsp

Chro.60558      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India