Chro.60563 | cryptopain precursor

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
Chro.60563OTHER0.9999390.0000540.000007
No Results

  • Fasta :-

    >Chro.60563 MDIGNNVEEHQEYISGPYIALINGTTQQREPNKKLKNIIIATLIAIFIVLVVTVSLYITN NTSDKIDDFVPGDYVDPATREYRKSFEEFKKKYNKTYSSMEEENQRFEIYKQNMNFIKTT NSQGFSYVLEMNEFGDLSKEEFMARFTGYIKDSKDDERVFKSSRVSASELEEEFVPPNSI NWVEAGCVNPIRNQKNCGSCWAFSAVAALEGATCAQTNRGLPSLSEQQFVDCSKQNGNFG CDGGTMGLAFQYAIKNKYLCTNDDYPYFAEEKTCMDSFCENYIEIPVKAYKYVFPRNINT LKTALAKYGPISVAIQADQTPFQFYKSGVFDAPCGTKVNHGVVLVGYDMDEDTNKEYWLV RNSWGEAWGEKGYIKLALHSGKKGTCGILVEPVYPVINQSI
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/680 Sequence name : 680 Sequence length : 401 VALUES OF COMPUTED PARAMETERS Coef20 : 2.561 CoefTot : 0.000 ChDiff : -10 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.582 3.318 0.632 1.020 MesoH : -0.616 0.199 -0.350 0.196 MuHd_075 : 8.036 5.818 2.773 2.790 MuHd_095 : 21.190 16.392 6.759 3.712 MuHd_100 : 28.613 19.046 8.045 5.210 MuHd_105 : 33.754 20.149 8.845 6.056 Hmax_075 : -6.417 -1.000 -3.554 2.320 Hmax_095 : 5.600 7.200 0.504 3.610 Hmax_100 : 5.600 7.200 0.504 3.610 Hmax_105 : 7.700 9.333 0.214 4.783 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9995 0.0005 DFMC : 0.9997 0.0003
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 401 Chro.60563 MDIGNNVEEHQEYISGPYIALINGTTQQREPNKKLKNIIIATLIAIFIVLVVTVSLYITNNTSDKIDDFVPGDYVDPATR 80 EYRKSFEEFKKKYNKTYSSMEEENQRFEIYKQNMNFIKTTNSQGFSYVLEMNEFGDLSKEEFMARFTGYIKDSKDDERVF 160 KSSRVSASELEEEFVPPNSINWVEAGCVNPIRNQKNCGSCWAFSAVAALEGATCAQTNRGLPSLSEQQFVDCSKQNGNFG 240 CDGGTMGLAFQYAIKNKYLCTNDDYPYFAEEKTCMDSFCENYIEIPVKAYKYVFPRNINTLKTALAKYGPISVAIQADQT 320 PFQFYKSGVFDAPCGTKVNHGVVLVGYDMDEDTNKEYWLVRNSWGEAWGEKGYIKLALHSGKKGTCGILVEPVYPVINQS 400 I 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 . 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Chro.60563 29 NGTTQQR|EP 0.080 . Chro.60563 33 QQREPNK|KL 0.070 . Chro.60563 34 QREPNKK|LK 0.129 . Chro.60563 36 EPNKKLK|NI 0.085 . Chro.60563 65 TNNTSDK|ID 0.073 . Chro.60563 80 YVDPATR|EY 0.080 . Chro.60563 83 PATREYR|KS 0.222 . Chro.60563 84 ATREYRK|SF 0.115 . Chro.60563 90 KSFEEFK|KK 0.062 . Chro.60563 91 SFEEFKK|KY 0.103 . Chro.60563 92 FEEFKKK|YN 0.117 . Chro.60563 95 FKKKYNK|TY 0.070 . Chro.60563 106 MEEENQR|FE 0.093 . Chro.60563 111 QRFEIYK|QN 0.082 . Chro.60563 118 QNMNFIK|TT 0.079 . Chro.60563 139 EFGDLSK|EE 0.062 . Chro.60563 145 KEEFMAR|FT 0.146 . Chro.60563 151 RFTGYIK|DS 0.067 . Chro.60563 154 GYIKDSK|DD 0.075 . Chro.60563 158 DSKDDER|VF 0.079 . Chro.60563 161 DDERVFK|SS 0.206 . Chro.60563 164 RVFKSSR|VS 0.083 . Chro.60563 192 GCVNPIR|NQ 0.089 . Chro.60563 195 NPIRNQK|NC 0.127 . Chro.60563 219 TCAQTNR|GL 0.089 . Chro.60563 234 QFVDCSK|QN 0.069 . Chro.60563 255 AFQYAIK|NK 0.057 . Chro.60563 257 QYAIKNK|YL 0.082 . Chro.60563 272 PYFAEEK|TC 0.058 . Chro.60563 288 YIEIPVK|AY 0.069 . Chro.60563 291 IPVKAYK|YV 0.088 . Chro.60563 296 YKYVFPR|NI 0.109 . Chro.60563 302 RNINTLK|TA 0.067 . Chro.60563 307 LKTALAK|YG 0.065 . Chro.60563 326 TPFQFYK|SG 0.076 . Chro.60563 337 DAPCGTK|VN 0.059 . Chro.60563 355 MDEDTNK|EY 0.066 . Chro.60563 361 KEYWLVR|NS 0.092 . Chro.60563 371 GEAWGEK|GY 0.065 . Chro.60563 375 GEKGYIK|LA 0.066 . Chro.60563 382 LALHSGK|KG 0.066 . Chro.60563 383 ALHSGKK|GT 0.122 . ____________________________^_________________

  • Fasta :-

    >Chro.60563 ATGGACATAGGAAACAACGTGGAAGAACATCAGGAATATATTTCTGGACCATACATTGCA TTAATTAATGGCACTACTCAACAAAGGGAGCCGAATAAAAAGTTGAAAAACATAATAATT GCAACGTTGATTGCAATCTTTATAGTTTTGGTTGTTACTGTATCTTTGTATATTACTAAT AACACCAGTGACAAAATTGACGATTTCGTACCTGGGGATTATGTTGATCCAGCAACTAGG GAGTATAGAAAGAGTTTTGAGGAGTTCAAAAAGAAATACAACAAAACATATAGCTCTATG GAGGAGGAAAATCAAAGATTTGAAATTTATAAGCAAAATATGAACTTTATTAAAACAACA AATAGCCAAGGATTCAGTTATGTATTAGAAATGAATGAATTTGGTGATTTGTCGAAAGAA GAGTTTATGGCAAGATTCACAGGATATATAAAAGATTCCAAAGATGATGAAAGGGTATTT AAGTCAAGTAGAGTCTCAGCAAGCGAATTAGAAGAGGAGTTTGTTCCCCCAAATTCTATT AATTGGGTAGAAGCTGGGTGCGTAAATCCAATAAGAAATCAAAAGAATTGTGGGTCATGT TGGGCTTTCTCTGCTGTTGCAGCTTTGGAGGGAGCAACGTGTGCTCAAACAAACCGAGGA TTACCAAGCTTGAGTGAACAACAATTTGTTGATTGCAGTAAACAAAATGGCAACTTTGGA TGTGATGGAGGAACAATGGGATTGGCTTTTCAGTATGCAATTAAGAACAAATATTTATGT ACTAATGATGATTACCCTTACTTTGCTGAGGAAAAAACATGTATGGATTCATTTTGCGAG AATTATATAGAGATTCCTGTAAAAGCCTACAAATATGTATTTCCGAGAAATATTAATACA TTAAAGACTGCTTTGGCTAAGTATGGGCCAATTTCAGTTGCAATTCAGGCCGATCAAACC CCTTTCCAGTTTTATAAAAGTGGAGTATTTGATGCTCCTTGTGGAACCAAGGTTAATCAT GGAGTTGTTCTAGTTGGATATGATATGGATGAAGATACTAATAAAGAATATTGGCTAGTA AGAAACAGCTGGGGCGAGGCGTGGGGAGAGAAAGGATACATCAAGCTAGCTCTTCATTCT GGAAAGAAGGGAACATGTGGTATATTGGTTGAGCCAGTGTATCCAGTGATTAATCAATCA ATATAA
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  • Fasta :-

    MDIGNNVEEHQEYISGPYIALINGTTQQREPNKKLKNIIIATLIAIFIVLVVTVSLYITN NTSDKIDDFVPGDYVDPATREYRKSFEEFKKKYNKTYSSMEEENQRFEIYKQNMNFIKTT NSQGFSYVLEMNEFGDLSKEEFMARFTGYIKDSKDDERVFKSSRVSASELEEEFVPPNSI NWVEAGCVNPIRNQKNCGSCWAFSAVAALEGATCAQTNRGLPSLSEQQFVDCSKQNGNFG CDGGTMGLAFQYAIKNKYLCTNDDYPYFAEEKTCMDSFCENYIEIPVKAYKYVFPRNINT LKTALAKYGPISVAIQADQTPFQFYKSGVFDAPCGTKVNHGVVLVGYDMDEDTNKEYWLV RNSWGEAWGEKGYIKLALHSGKKGTCGILVEPVYPVINQSI

  • title: active site
  • coordinates: Q194,C200,H340,N362
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
Chro.60563166 SSSRVSASEL0.998unspChro.60563166 SSSRVSASEL0.998unspChro.60563166 SSSRVSASEL0.998unspChro.6056385 SEYRKSFEEF0.997unspChro.60563153 SYIKDSKDDE0.996unsp

Chro.60563      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India