Chro.70222 | DUF140-related

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  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

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  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
Chro.70222OTHER0.9999830.0000030.000014
No Results

  • Fasta :-

    >Chro.70222 METLISRIKEGTSFSDLYSGIYQKIVEDKGTELAQKFVKIMGHCIGIEFRDPSLIISPRS SPDVLVQKGMTFNLSIGFNNLDSNGKKYAIWICDTVFLSQEGNVEVLTQGCSKKLEHVSY ELDDEEPEEQKPVVKKEKTSQVKKEKPTKKELDESEDEFDDDETEEDSEDDRHSKSKKDS KEIKKEKKSKDHLIIEDRLRRTARRVNNSEHSEELKEIENRQKELRKRKLVELQKRFGGK KEEKNDQKGDISDSEEDFFNSKLSSYKSVKEYPKERSSSRIYVDTAKESILVPIYGLLVP FHVRLLKNVVCTQEEGRKSFILRINFLLPTGISLEQLPSTLKTPVFIKELMIRSEDGKTL NSIFRSIKELIKRFKQKGTLEEEMAEQDMIKNQQPIDFNRSKQRVVLKDVGIRPTIGQGR RQHGILEAHNNGFRFSSSKGETIDILYTSIKHAIFQPVENDLIVILHLHLKHSIWLGKKK TQDIQFYSEVGNQIDDLEQRRGRNVYDPDEIMEEQRERETKKRYNLEYKKFIQGIEELSK NSFEAEIPYRDLGFYGVPGRAGVSNVQLFPTASCLVHLLEFPPFVLSLDEIEVVSFERVE QGLRNFDMIFVTKDYSKPVKRVDSIPIEYLDLIKRWLNEMEIVYYEGRQNLNWNAVLKTI LSDIEDFVQNGGFNGFLGEDSDDEEGGSDDDDDDEDEEYSESDEDDEDDDDDDDDEDLSD LEEESSDDSFKELSSDEEEGLSWDELEKQAIKEDRKRGREQDEDRRVDSGYSRKRR
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/471 Sequence name : 471 Sequence length : 776 VALUES OF COMPUTED PARAMETERS Coef20 : 3.869 CoefTot : 0.000 ChDiff : -48 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.165 1.812 0.101 0.640 MesoH : -0.625 0.498 -0.368 0.235 MuHd_075 : 19.849 13.074 4.521 4.313 MuHd_095 : 14.140 11.746 4.856 2.722 MuHd_100 : 21.997 12.925 6.476 4.113 MuHd_105 : 28.194 18.607 7.656 6.384 Hmax_075 : 11.000 8.600 1.546 3.580 Hmax_095 : 5.000 9.700 0.196 3.410 Hmax_100 : 15.200 12.800 2.659 4.790 Hmax_105 : 1.400 6.800 -0.818 2.580 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9582 0.0418 DFMC : 0.9363 0.0637
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 776 Chro.70222 METLISRIKEGTSFSDLYSGIYQKIVEDKGTELAQKFVKIMGHCIGIEFRDPSLIISPRSSPDVLVQKGMTFNLSIGFNN 80 LDSNGKKYAIWICDTVFLSQEGNVEVLTQGCSKKLEHVSYELDDEEPEEQKPVVKKEKTSQVKKEKPTKKELDESEDEFD 160 DDETEEDSEDDRHSKSKKDSKEIKKEKKSKDHLIIEDRLRRTARRVNNSEHSEELKEIENRQKELRKRKLVELQKRFGGK 240 KEEKNDQKGDISDSEEDFFNSKLSSYKSVKEYPKERSSSRIYVDTAKESILVPIYGLLVPFHVRLLKNVVCTQEEGRKSF 320 ILRINFLLPTGISLEQLPSTLKTPVFIKELMIRSEDGKTLNSIFRSIKELIKRFKQKGTLEEEMAEQDMIKNQQPIDFNR 400 SKQRVVLKDVGIRPTIGQGRRQHGILEAHNNGFRFSSSKGETIDILYTSIKHAIFQPVENDLIVILHLHLKHSIWLGKKK 480 TQDIQFYSEVGNQIDDLEQRRGRNVYDPDEIMEEQRERETKKRYNLEYKKFIQGIEELSKNSFEAEIPYRDLGFYGVPGR 560 AGVSNVQLFPTASCLVHLLEFPPFVLSLDEIEVVSFERVEQGLRNFDMIFVTKDYSKPVKRVDSIPIEYLDLIKRWLNEM 640 EIVYYEGRQNLNWNAVLKTILSDIEDFVQNGGFNGFLGEDSDDEEGGSDDDDDDEDEEYSESDEDDEDDDDDDDDEDLSD 720 LEEESSDDSFKELSSDEEEGLSWDELEKQAIKEDRKRGREQDEDRRVDSGYSRKRR 800 ................................................................................ 80 ................................................................................ 160 ...........................................P.................................... 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 .......................................................P 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 2 Name Pos Context Score Pred ____________________________v_________________ Chro.70222 7 METLISR|IK 0.069 . Chro.70222 9 TLISRIK|EG 0.055 . Chro.70222 24 YSGIYQK|IV 0.096 . Chro.70222 29 QKIVEDK|GT 0.087 . Chro.70222 36 GTELAQK|FV 0.093 . Chro.70222 39 LAQKFVK|IM 0.081 . Chro.70222 50 CIGIEFR|DP 0.099 . Chro.70222 59 SLIISPR|SS 0.197 . Chro.70222 68 PDVLVQK|GM 0.064 . Chro.70222 86 NLDSNGK|KY 0.058 . Chro.70222 87 LDSNGKK|YA 0.195 . Chro.70222 113 LTQGCSK|KL 0.066 . Chro.70222 114 TQGCSKK|LE 0.104 . Chro.70222 131 EEPEEQK|PV 0.076 . Chro.70222 135 EQKPVVK|KE 0.060 . Chro.70222 136 QKPVVKK|EK 0.124 . Chro.70222 138 PVVKKEK|TS 0.063 . Chro.70222 143 EKTSQVK|KE 0.057 . Chro.70222 144 KTSQVKK|EK 0.107 . Chro.70222 146 SQVKKEK|PT 0.084 . Chro.70222 149 KKEKPTK|KE 0.061 . Chro.70222 150 KEKPTKK|EL 0.182 . Chro.70222 172 EDSEDDR|HS 0.095 . Chro.70222 175 EDDRHSK|SK 0.197 . Chro.70222 177 DRHSKSK|KD 0.092 . Chro.70222 178 RHSKSKK|DS 0.243 . Chro.70222 181 KSKKDSK|EI 0.075 . Chro.70222 184 KDSKEIK|KE 0.077 . Chro.70222 185 DSKEIKK|EK 0.086 . Chro.70222 187 KEIKKEK|KS 0.070 . Chro.70222 188 EIKKEKK|SK 0.165 . Chro.70222 190 KKEKKSK|DH 0.098 . Chro.70222 198 HLIIEDR|LR 0.079 . Chro.70222 200 IIEDRLR|RT 0.076 . Chro.70222 201 IEDRLRR|TA 0.413 . Chro.70222 204 RLRRTAR|RV 0.631 *ProP* Chro.70222 205 LRRTARR|VN 0.140 . Chro.70222 216 EHSEELK|EI 0.074 . Chro.70222 221 LKEIENR|QK 0.081 . Chro.70222 223 EIENRQK|EL 0.060 . Chro.70222 226 NRQKELR|KR 0.098 . Chro.70222 227 RQKELRK|RK 0.072 . Chro.70222 228 QKELRKR|KL 0.160 . Chro.70222 229 KELRKRK|LV 0.341 . Chro.70222 235 KLVELQK|RF 0.062 . Chro.70222 236 LVELQKR|FG 0.264 . Chro.70222 240 QKRFGGK|KE 0.069 . Chro.70222 241 KRFGGKK|EE 0.085 . Chro.70222 244 GGKKEEK|ND 0.066 . Chro.70222 248 EEKNDQK|GD 0.058 . Chro.70222 262 EDFFNSK|LS 0.058 . Chro.70222 267 SKLSSYK|SV 0.105 . Chro.70222 270 SSYKSVK|EY 0.075 . Chro.70222 274 SVKEYPK|ER 0.061 . Chro.70222 276 KEYPKER|SS 0.178 . Chro.70222 280 KERSSSR|IY 0.090 . Chro.70222 287 IYVDTAK|ES 0.060 . Chro.70222 304 LVPFHVR|LL 0.085 . Chro.70222 307 FHVRLLK|NV 0.127 . Chro.70222 317 CTQEEGR|KS 0.083 . Chro.70222 318 TQEEGRK|SF 0.087 . Chro.70222 323 RKSFILR|IN 0.114 . Chro.70222 342 QLPSTLK|TP 0.051 . Chro.70222 348 KTPVFIK|EL 0.059 . Chro.70222 353 IKELMIR|SE 0.130 . Chro.70222 358 IRSEDGK|TL 0.086 . Chro.70222 365 TLNSIFR|SI 0.179 . Chro.70222 368 SIFRSIK|EL 0.142 . Chro.70222 372 SIKELIK|RF 0.060 . Chro.70222 373 IKELIKR|FK 0.216 . Chro.70222 375 ELIKRFK|QK 0.084 . Chro.70222 377 IKRFKQK|GT 0.117 . Chro.70222 391 AEQDMIK|NQ 0.064 . Chro.70222 400 QPIDFNR|SK 0.140 . Chro.70222 402 IDFNRSK|QR 0.060 . Chro.70222 404 FNRSKQR|VV 0.123 . Chro.70222 408 KQRVVLK|DV 0.130 . Chro.70222 413 LKDVGIR|PT 0.092 . Chro.70222 420 PTIGQGR|RQ 0.100 . Chro.70222 421 TIGQGRR|QH 0.179 . Chro.70222 434 AHNNGFR|FS 0.117 . Chro.70222 439 FRFSSSK|GE 0.066 . Chro.70222 451 ILYTSIK|HA 0.072 . Chro.70222 471 ILHLHLK|HS 0.067 . Chro.70222 478 HSIWLGK|KK 0.066 . Chro.70222 479 SIWLGKK|KT 0.099 . Chro.70222 480 IWLGKKK|TQ 0.124 . Chro.70222 500 IDDLEQR|RG 0.068 . Chro.70222 501 DDLEQRR|GR 0.105 . Chro.70222 503 LEQRRGR|NV 0.365 . Chro.70222 516 EIMEEQR|ER 0.084 . Chro.70222 518 MEEQRER|ET 0.088 . Chro.70222 521 QRERETK|KR 0.123 . Chro.70222 522 RERETKK|RY 0.105 . Chro.70222 523 ERETKKR|YN 0.224 . Chro.70222 529 RYNLEYK|KF 0.077 . Chro.70222 530 YNLEYKK|FI 0.112 . Chro.70222 540 GIEELSK|NS 0.063 . Chro.70222 550 EAEIPYR|DL 0.127 . Chro.70222 560 FYGVPGR|AG 0.074 . Chro.70222 598 EVVSFER|VE 0.067 . Chro.70222 604 RVEQGLR|NF 0.077 . Chro.70222 613 DMIFVTK|DY 0.076 . Chro.70222 617 VTKDYSK|PV 0.070 . Chro.70222 620 DYSKPVK|RV 0.085 . Chro.70222 621 YSKPVKR|VD 0.171 . Chro.70222 634 EYLDLIK|RW 0.053 . Chro.70222 635 YLDLIKR|WL 0.146 . Chro.70222 648 IVYYEGR|QN 0.074 . Chro.70222 658 NWNAVLK|TI 0.068 . Chro.70222 731 SSDDSFK|EL 0.077 . Chro.70222 748 SWDELEK|QA 0.064 . Chro.70222 752 LEKQAIK|ED 0.058 . Chro.70222 755 QAIKEDR|KR 0.111 . Chro.70222 756 AIKEDRK|RG 0.068 . Chro.70222 757 IKEDRKR|GR 0.234 . Chro.70222 759 EDRKRGR|EQ 0.106 . Chro.70222 765 REQDEDR|RV 0.128 . Chro.70222 766 EQDEDRR|VD 0.081 . Chro.70222 773 VDSGYSR|KR 0.082 . Chro.70222 774 DSGYSRK|RR 0.075 . Chro.70222 775 SGYSRKR|R- 0.166 . Chro.70222 776 GYSRKRR|-- 0.698 *ProP* ____________________________^_________________

  • Fasta :-

    >Chro.70222 ATGGAAACTCTAATTTCCAGAATAAAGGAGGGAACATCTTTTAGCGATCTTTATTCTGGT ATTTACCAGAAGATAGTTGAAGATAAAGGAACTGAGCTTGCCCAAAAGTTTGTTAAGATT ATGGGACATTGCATAGGAATTGAGTTCAGAGATCCTTCTTTAATAATCAGCCCAAGATCG TCCCCAGATGTTCTAGTACAGAAAGGAATGACTTTCAATTTATCTATTGGATTCAATAAT CTAGACTCTAATGGCAAAAAGTACGCAATTTGGATTTGTGATACTGTATTTTTATCCCAA GAAGGGAATGTGGAAGTCCTGACACAAGGATGTAGCAAGAAGCTGGAACATGTCTCATAT GAACTGGATGATGAAGAACCTGAAGAGCAGAAACCTGTTGTAAAGAAAGAAAAGACTTCA CAAGTTAAGAAGGAAAAGCCAACAAAAAAGGAGCTTGATGAGTCTGAAGATGAGTTTGAC GATGATGAGACAGAAGAGGATAGTGAAGACGATAGACATTCAAAGTCAAAAAAAGATTCG AAGGAAATTAAAAAAGAAAAGAAATCCAAAGACCATTTAATAATTGAAGATAGACTAAGA AGAACTGCCAGAAGAGTAAATAACTCTGAACACTCGGAGGAACTCAAGGAGATAGAAAAC AGGCAAAAAGAACTTAGAAAACGAAAACTTGTTGAGCTTCAGAAGCGGTTCGGAGGTAAG AAGGAGGAAAAGAATGACCAAAAAGGAGATATTTCAGACTCTGAAGAGGACTTTTTCAAC TCCAAGCTTTCAAGTTATAAGTCTGTTAAAGAGTATCCAAAGGAAAGGAGCTCTAGTAGA ATTTATGTTGATACTGCAAAGGAGAGCATCCTTGTACCAATTTACGGTCTGTTGGTTCCT TTCCACGTTAGACTACTTAAAAATGTTGTCTGTACTCAGGAAGAGGGCAGAAAATCTTTT ATTTTGAGAATTAACTTTCTGCTACCAACAGGAATTTCTTTGGAGCAGTTACCAAGTACC TTGAAGACCCCTGTATTTATTAAAGAGCTAATGATTCGTTCAGAAGATGGAAAGACATTA AATAGTATCTTCAGAAGCATTAAGGAGTTAATTAAAAGATTTAAACAGAAAGGCACACTT GAGGAGGAAATGGCTGAACAGGATATGATTAAAAATCAACAGCCAATCGATTTTAATAGA TCAAAGCAAAGAGTAGTTCTTAAAGATGTTGGAATTCGGCCCACAATTGGACAGGGCAGA CGCCAGCACGGTATATTAGAGGCTCATAACAACGGGTTCAGGTTTAGTTCATCCAAGGGT GAGACAATTGATATTTTATATACCAGCATTAAACATGCAATATTTCAACCTGTAGAAAAT GATTTGATAGTCATTTTACATTTGCACCTTAAACATTCAATTTGGCTTGGAAAAAAGAAA ACCCAAGATATTCAGTTTTACTCTGAGGTAGGAAACCAAATTGATGATTTAGAGCAGAGA AGAGGTAGAAATGTGTATGATCCTGATGAAATAATGGAGGAACAGCGTGAACGTGAAACA AAGAAAAGGTATAACCTTGAATATAAAAAATTCATACAAGGAATTGAAGAGTTGAGCAAA AATAGTTTTGAAGCAGAAATTCCTTATAGAGACCTTGGATTCTATGGTGTTCCAGGAAGG GCTGGAGTTTCAAATGTTCAACTCTTTCCAACAGCATCTTGTCTGGTTCATCTACTCGAG TTCCCACCATTTGTACTTTCATTGGATGAAATAGAAGTTGTATCATTTGAGAGGGTCGAA CAGGGACTTCGCAACTTTGATATGATTTTTGTCACAAAAGACTATTCAAAACCTGTAAAA CGAGTAGACTCAATTCCTATTGAGTATTTAGATTTAATTAAGCGTTGGCTTAACGAAATG GAGATTGTTTACTACGAAGGAAGACAAAATCTCAACTGGAATGCTGTATTGAAGACAATA TTGAGCGATATTGAAGATTTTGTACAAAATGGAGGCTTCAACGGTTTCTTAGGTGAAGAT AGCGATGATGAAGAGGGTGGAAGCGACGACGACGATGATGATGAGGATGAAGAATATTCT GAGAGCGATGAAGATGATGAAGACGATGATGACGACGATGACGATGAGGATCTTTCGGAT CTTGAGGAGGAAAGTTCTGATGACTCTTTTAAGGAGCTTTCAAGCGATGAAGAAGAAGGT CTAAGTTGGGATGAACTTGAAAAACAGGCCATAAAGGAGGACAGAAAGAGGGGAAGGGAA CAGGACGAAGATAGAAGAGTAGACTCTGGATACTCTAGGAAGAGGCGTTAA
  • Download Fasta

  • Fasta :-

    METLISRIKEGTSFSDLYSGIYQKIVEDKGTELAQKFVKIMGHCIGIEFRDPSLIISPRS SPDVLVQKGMTFNLSIGFNNLDSNGKKYAIWICDTVFLSQEGNVEVLTQGCSKKLEHVSY ELDDEEPEEQKPVVKKEKTSQVKKEKPTKKELDESEDEFDDDETEEDSEDDRHSKSKKDS KEIKKEKKSKDHLIIEDRLRRTARRVNNSEHSEELKEIENRQKELRKRKLVELQKRFGGK KEEKNDQKGDISDSEEDFFNSKLSSYKSVKEYPKERSSSRIYVDTAKESILVPIYGLLVP FHVRLLKNVVCTQEEGRKSFILRINFLLPTGISLEQLPSTLKTPVFIKELMIRSEDGKTL NSIFRSIKELIKRFKQKGTLEEEMAEQDMIKNQQPIDFNRSKQRVVLKDVGIRPTIGQGR RQHGILEAHNNGFRFSSSKGETIDILYTSIKHAIFQPVENDLIVILHLHLKHSIWLGKKK TQDIQFYSEVGNQIDDLEQRRGRNVYDPDEIMEEQRERETKKRYNLEYKKFIQGIEELSK NSFEAEIPYRDLGFYGVPGRAGVSNVQLFPTASCLVHLLEFPPFVLSLDEIEVVSFERVE QGLRNFDMIFVTKDYSKPVKRVDSIPIEYLDLIKRWLNEMEIVYYEGRQNLNWNAVLKTI LSDIEDFVQNGGFNGFLGEDSDDEEGGSDDDDDDEDEEYSESDEDDEDDDDDDDDEDLSD LEEESSDDSFKELSSDEEEGLSWDELEKQAIKEDRKRGREQDEDRRVDSGYSRKRR

    No Results
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IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
Chro.70222155 SELDESEDEF0.994unspChro.70222155 SELDESEDEF0.994unspChro.70222155 SELDESEDEF0.994unspChro.70222168 STEEDSEDDR0.99unspChro.70222174 SDDRHSKSKK0.997unspChro.70222176 SRHSKSKKDS0.998unspChro.70222180 SSKKDSKEIK0.994unspChro.70222252 SKGDISDSEE0.992unspChro.70222254 SDISDSEEDF0.997unspChro.70222268 SSSYKSVKEY0.997unspChro.70222278 SKERSSSRIY0.993unspChro.70222438 SRFSSSKGET0.993unspChro.70222688 SEEGGSDDDD0.995unspChro.70222700 SDEEYSESDE0.996unspChro.70222702 SEYSESDEDD0.996unspChro.70222725 SLEEESSDDS0.993unspChro.70222729 SSSDDSFKEL0.997unspChro.70222735 SKELSSDEEE0.996unspChro.70222742 SEEGLSWDEL0.994unspChro.70222769 SRRVDSGYSR0.991unspChro.7022213 SKEGTSFSDL0.995unspChro.7022261 SSPRSSPDVL0.996unsp

Chro.70222      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India