Chro.70298 | clpB protein

UniProt_ID:

Computed_GO_Component_IDs:
Computed_GO_Components:
Computed_GO_Function_IDs:
Computed_GO_Functions:
Computed_GO_Process_IDs:
Computed_GO_Processes:
Curated_GO_Component_IDs:
Curated_GO_Components:
Curated_GO_Function_IDs:
Curated_GO_Functions:
Curated_GO_Processes:

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	Chro.70298	SP	0.187192	0.812588	0.000220	CS pos: 28-29. VHA-VV. Pr: 0.7161

No Results

Fasta :-
>Chro.70298 MNTPKFNFIKCFLLILFFNLATFFLVHAVVSESTSSVDQLRDEYSISEFLNGNQTNEDHY ASIDRNELETRPSFDSNRESLNAHLENKLTGVNKQSFVEFQKGKLSKNDVDIEELIFEIV KLALDGNGSRVLPSLELIDFLQKIIETSKYNTVTTLDYILAFISKEKFDTSITHDINRLR NFTEYLSYLLKYNDNGPNRMLNSGKETLSLIKTRIHSSIWGMEELIRTNKIMDYEIQNLG GKTTYSSQPVIGEITNEINSNQPRAVFSYKLVKQTIIEMLGTNINKVYSKLKRIYGKITY SGSSKSNKSISLNLLYAIYLSAIMINDLYNQGLSSNLLSPGFIFMVLLRDDIEHLPNNWE ERLIKRSISYGINEIDIKIQDSKYSNLESIITKGFTHSECNASVLRSNIQVVFRKYGIEY FKFMNEALKKYKTFFVPSTDGRINSISWFNNYSVNGYTNKLNKKWFVDINELVIENGVTK AVDFMDEFHLLEISLSRSGLSSAIIVSESKLLKGTLVEYLAYRIINGNSSIDLRGYRIIS IHLESLLESCKNTKKSLTEQIKIKFDELMGAYDGKIIVFTDNLFSSFETSTGSKRLYDIM KHYIVLGTLKVIATLSNENYKILTEKEIEVKSIFYTIEMKELNGIVSEVFISGLRYQLEL STGIFINNDVIRVSVLMCHKYIENCVLPDDAVELINFAISMAKNEQFLEIPSAIHGIEDF ISHSRIGAQVSKMRDYESNSIISSNRSRLSEVLAMHLRMRNRIVSLALKIRPYLTNFRYL KTQLYFMMLINLNYQTSCVNKPVEDEFKLLENREKIIPNFSEELSVTQLTSLYRKNLLKY KQINNKSYNESINDEVSAITESQLDPMFFDDIHQVVKDKQKEVADMKSLILEMAFNYNSL YSPLGMGEIDASHIAFIISEKYGKSITKLLDEIEYRKLPERMKDRLSEILSKYVIGQKSA IDYVSFHLGVELLRNNKNNPRCLLFVGPSGSGKKTFALALQTTLAESSVLFYDFSYDITM YSHFKILKSSDFADADAAKRLLGDNPKTGIISEELKQTGKTVFFFEHIENMHPDVIKLIL DILHNKDNINHKIGNLGSSTFILTTKVGSEIILKNPDQIDRIKIRVDIIKKLRETFSSDL VRLIQNVVLFRPFTKEEALKILELNFSEFSVLIKKNYSTIFIQPSLLVLNKIVDKKYSPE LGYKSVLDFFEKEVKEKVLQLIKKGILVPYTTFKITIRDISSVEDPNGFKIDFAIVKKSI NSR
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/437 Sequence name : 437 Sequence length : 1263 VALUES OF COMPUTED PARAMETERS Coef20 : 4.346 CoefTot : -0.116 ChDiff : 6 ZoneTo : 31 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.071 2.335 0.280 0.824 MesoH : -0.327 0.586 -0.342 0.269 MuHd_075 : 23.143 17.909 5.678 4.422 MuHd_095 : 20.057 17.729 4.874 5.986 MuHd_100 : 13.313 12.246 4.244 4.142 MuHd_105 : 11.195 6.822 5.292 2.812 Hmax_075 : 21.933 27.100 3.057 6.170 Hmax_095 : 23.012 23.713 3.979 8.313 Hmax_100 : 22.600 24.300 5.088 8.300 Hmax_105 : 20.300 16.567 5.503 6.580 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5732 0.4268 DFMC : 0.6318 0.3682

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 1263 Chro.70298 MNTPKFNFIKCFLLILFFNLATFFLVHAVVSESTSSVDQLRDEYSISEFLNGNQTNEDHYASIDRNELETRPSFDSNRES 80 LNAHLENKLTGVNKQSFVEFQKGKLSKNDVDIEELIFEIVKLALDGNGSRVLPSLELIDFLQKIIETSKYNTVTTLDYIL 160 AFISKEKFDTSITHDINRLRNFTEYLSYLLKYNDNGPNRMLNSGKETLSLIKTRIHSSIWGMEELIRTNKIMDYEIQNLG 240 GKTTYSSQPVIGEITNEINSNQPRAVFSYKLVKQTIIEMLGTNINKVYSKLKRIYGKITYSGSSKSNKSISLNLLYAIYL 320 SAIMINDLYNQGLSSNLLSPGFIFMVLLRDDIEHLPNNWEERLIKRSISYGINEIDIKIQDSKYSNLESIITKGFTHSEC 400 NASVLRSNIQVVFRKYGIEYFKFMNEALKKYKTFFVPSTDGRINSISWFNNYSVNGYTNKLNKKWFVDINELVIENGVTK 480 AVDFMDEFHLLEISLSRSGLSSAIIVSESKLLKGTLVEYLAYRIINGNSSIDLRGYRIISIHLESLLESCKNTKKSLTEQ 560 IKIKFDELMGAYDGKIIVFTDNLFSSFETSTGSKRLYDIMKHYIVLGTLKVIATLSNENYKILTEKEIEVKSIFYTIEMK 640 ELNGIVSEVFISGLRYQLELSTGIFINNDVIRVSVLMCHKYIENCVLPDDAVELINFAISMAKNEQFLEIPSAIHGIEDF 720 ISHSRIGAQVSKMRDYESNSIISSNRSRLSEVLAMHLRMRNRIVSLALKIRPYLTNFRYLKTQLYFMMLINLNYQTSCVN 800 KPVEDEFKLLENREKIIPNFSEELSVTQLTSLYRKNLLKYKQINNKSYNESINDEVSAITESQLDPMFFDDIHQVVKDKQ 880 KEVADMKSLILEMAFNYNSLYSPLGMGEIDASHIAFIISEKYGKSITKLLDEIEYRKLPERMKDRLSEILSKYVIGQKSA 960 IDYVSFHLGVELLRNNKNNPRCLLFVGPSGSGKKTFALALQTTLAESSVLFYDFSYDITMYSHFKILKSSDFADADAAKR 1040 LLGDNPKTGIISEELKQTGKTVFFFEHIENMHPDVIKLILDILHNKDNINHKIGNLGSSTFILTTKVGSEIILKNPDQID 1120 RIKIRVDIIKKLRETFSSDLVRLIQNVVLFRPFTKEEALKILELNFSEFSVLIKKNYSTIFIQPSLLVLNKIVDKKYSPE 1200 LGYKSVLDFFEKEVKEKVLQLIKKGILVPYTTFKITIRDISSVEDPNGFKIDFAIVKKSINSR 1280 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ................................................................................ 960 ................................................................................ 1040 ................................................................................ 1120 ................................................................................ 1200 ............................................................... 1280 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Chro.70298 5 --MNTPK|FN 0.072 . Chro.70298 10 PKFNFIK|CF 0.065 . Chro.70298 41 SSVDQLR|DE 0.095 . Chro.70298 65 HYASIDR|NE 0.081 . Chro.70298 71 RNELETR|PS 0.096 . Chro.70298 78 PSFDSNR|ES 0.075 . Chro.70298 88 NAHLENK|LT 0.072 . Chro.70298 94 KLTGVNK|QS 0.068 . Chro.70298 102 SFVEFQK|GK 0.060 . Chro.70298 104 VEFQKGK|LS 0.066 . Chro.70298 107 QKGKLSK|ND 0.077 . Chro.70298 121 LIFEIVK|LA 0.062 . Chro.70298 130 LDGNGSR|VL 0.069 . Chro.70298 143 LIDFLQK|II 0.062 . Chro.70298 149 KIIETSK|YN 0.061 . Chro.70298 165 ILAFISK|EK 0.063 . Chro.70298 167 AFISKEK|FD 0.069 . Chro.70298 178 ITHDINR|LR 0.078 . Chro.70298 180 HDINRLR|NF 0.094 . Chro.70298 191 YLSYLLK|YN 0.082 . Chro.70298 199 NDNGPNR|ML 0.118 . Chro.70298 205 RMLNSGK|ET 0.066 . Chro.70298 212 ETLSLIK|TR 0.052 . Chro.70298 214 LSLIKTR|IH 0.125 . Chro.70298 227 GMEELIR|TN 0.074 . Chro.70298 230 ELIRTNK|IM 0.120 . Chro.70298 242 IQNLGGK|TT 0.066 . Chro.70298 264 INSNQPR|AV 0.184 . Chro.70298 270 RAVFSYK|LV 0.090 . Chro.70298 273 FSYKLVK|QT 0.069 . Chro.70298 286 LGTNINK|VY 0.061 . Chro.70298 290 INKVYSK|LK 0.065 . Chro.70298 292 KVYSKLK|RI 0.072 . Chro.70298 293 VYSKLKR|IY 0.314 . Chro.70298 297 LKRIYGK|IT 0.075 . Chro.70298 305 TYSGSSK|SN 0.084 . Chro.70298 308 GSSKSNK|SI 0.152 . Chro.70298 349 IFMVLLR|DD 0.107 . Chro.70298 362 PNNWEER|LI 0.114 . Chro.70298 365 WEERLIK|RS 0.111 . Chro.70298 366 EERLIKR|SI 0.436 . Chro.70298 378 INEIDIK|IQ 0.060 . Chro.70298 383 IKIQDSK|YS 0.061 . Chro.70298 393 LESIITK|GF 0.083 . Chro.70298 406 CNASVLR|SN 0.152 . Chro.70298 414 NIQVVFR|KY 0.129 . Chro.70298 415 IQVVFRK|YG 0.100 . Chro.70298 422 YGIEYFK|FM 0.067 . Chro.70298 429 FMNEALK|KY 0.060 . Chro.70298 430 MNEALKK|YK 0.105 . Chro.70298 432 EALKKYK|TF 0.061 . Chro.70298 442 VPSTDGR|IN 0.114 . Chro.70298 460 VNGYTNK|LN 0.063 . Chro.70298 463 YTNKLNK|KW 0.067 . Chro.70298 464 TNKLNKK|WF 0.106 . Chro.70298 480 IENGVTK|AV 0.085 . Chro.70298 497 LEISLSR|SG 0.083 . Chro.70298 510 IIVSESK|LL 0.056 . Chro.70298 513 SESKLLK|GT 0.069 . Chro.70298 523 VEYLAYR|II 0.075 . Chro.70298 534 NSSIDLR|GY 0.105 . Chro.70298 537 IDLRGYR|II 0.268 . Chro.70298 551 SLLESCK|NT 0.065 . Chro.70298 554 ESCKNTK|KS 0.060 . Chro.70298 555 SCKNTKK|SL 0.175 . Chro.70298 562 SLTEQIK|IK 0.074 . Chro.70298 564 TEQIKIK|FD 0.081 . Chro.70298 575 MGAYDGK|II 0.065 . Chro.70298 594 ETSTGSK|RL 0.071 . Chro.70298 595 TSTGSKR|LY 0.180 . Chro.70298 601 RLYDIMK|HY 0.071 . Chro.70298 610 IVLGTLK|VI 0.054 . Chro.70298 621 LSNENYK|IL 0.077 . Chro.70298 626 YKILTEK|EI 0.067 . Chro.70298 631 EKEIEVK|SI 0.085 . Chro.70298 640 FYTIEMK|EL 0.060 . Chro.70298 655 VFISGLR|YQ 0.060 . Chro.70298 672 INNDVIR|VS 0.083 . Chro.70298 680 SVLMCHK|YI 0.063 . Chro.70298 703 FAISMAK|NE 0.056 . Chro.70298 725 DFISHSR|IG 0.079 . Chro.70298 732 IGAQVSK|MR 0.066 . Chro.70298 734 AQVSKMR|DY 0.108 . Chro.70298 746 SIISSNR|SR 0.100 . Chro.70298 748 ISSNRSR|LS 0.114 . Chro.70298 758 VLAMHLR|MR 0.083 . Chro.70298 760 AMHLRMR|NR 0.091 . Chro.70298 762 HLRMRNR|IV 0.170 . Chro.70298 769 IVSLALK|IR 0.053 . Chro.70298 771 SLALKIR|PY 0.097 . Chro.70298 778 PYLTNFR|YL 0.086 . Chro.70298 781 TNFRYLK|TQ 0.095 . Chro.70298 801 QTSCVNK|PV 0.125 . Chro.70298 808 PVEDEFK|LL 0.066 . Chro.70298 813 FKLLENR|EK 0.067 . Chro.70298 815 LLENREK|II 0.061 . Chro.70298 834 QLTSLYR|KN 0.071 . Chro.70298 835 LTSLYRK|NL 0.079 . Chro.70298 839 YRKNLLK|YK 0.069 . Chro.70298 841 KNLLKYK|QI 0.066 . Chro.70298 846 YKQINNK|SY 0.093 . Chro.70298 877 DIHQVVK|DK 0.079 . Chro.70298 879 HQVVKDK|QK 0.076 . Chro.70298 881 VVKDKQK|EV 0.078 . Chro.70298 887 KEVADMK|SL 0.073 . Chro.70298 921 AFIISEK|YG 0.062 . Chro.70298 924 ISEKYGK|SI 0.100 . Chro.70298 928 YGKSITK|LL 0.069 . Chro.70298 936 LDEIEYR|KL 0.077 . Chro.70298 937 DEIEYRK|LP 0.065 . Chro.70298 941 YRKLPER|MK 0.086 . Chro.70298 943 KLPERMK|DR 0.062 . Chro.70298 945 PERMKDR|LS 0.090 . Chro.70298 952 LSEILSK|YV 0.083 . Chro.70298 958 KYVIGQK|SA 0.080 . Chro.70298 974 LGVELLR|NN 0.070 . Chro.70298 977 ELLRNNK|NN 0.079 . Chro.70298 981 NNKNNPR|CL 0.095 . Chro.70298 993 GPSGSGK|KT 0.085 . Chro.70298 994 PSGSGKK|TF 0.092 . Chro.70298 1025 TMYSHFK|IL 0.064 . Chro.70298 1028 SHFKILK|SS 0.079 . Chro.70298 1039 ADADAAK|RL 0.061 . Chro.70298 1040 DADAAKR|LL 0.179 . Chro.70298 1047 LLGDNPK|TG 0.065 . Chro.70298 1056 IISEELK|QT 0.088 . Chro.70298 1060 ELKQTGK|TV 0.075 . Chro.70298 1077 MHPDVIK|LI 0.079 . Chro.70298 1086 LDILHNK|DN 0.067 . Chro.70298 1092 KDNINHK|IG 0.067 . Chro.70298 1106 TFILTTK|VG 0.062 . Chro.70298 1114 GSEIILK|NP 0.065 . Chro.70298 1121 NPDQIDR|IK 0.077 . Chro.70298 1123 DQIDRIK|IR 0.061 . Chro.70298 1125 IDRIKIR|VD 0.090 . Chro.70298 1130 IRVDIIK|KL 0.073 . Chro.70298 1131 RVDIIKK|LR 0.070 . Chro.70298 1133 DIIKKLR|ET 0.083 . Chro.70298 1142 FSSDLVR|LI 0.099 . Chro.70298 1151 QNVVLFR|PF 0.100 . Chro.70298 1155 LFRPFTK|EE 0.059 . Chro.70298 1160 TKEEALK|IL 0.068 . Chro.70298 1174 EFSVLIK|KN 0.064 . Chro.70298 1175 FSVLIKK|NY 0.107 . Chro.70298 1191 SLLVLNK|IV 0.081 . Chro.70298 1195 LNKIVDK|KY 0.074 . Chro.70298 1196 NKIVDKK|YS 0.096 . Chro.70298 1204 SPELGYK|SV 0.097 . Chro.70298 1212 VLDFFEK|EV 0.073 . Chro.70298 1215 FFEKEVK|EK 0.054 . Chro.70298 1217 EKEVKEK|VL 0.067 . Chro.70298 1223 KVLQLIK|KG 0.052 . Chro.70298 1224 VLQLIKK|GI 0.110 . Chro.70298 1234 VPYTTFK|IT 0.069 . Chro.70298 1238 TFKITIR|DI 0.159 . Chro.70298 1250 EDPNGFK|ID 0.059 . Chro.70298 1257 IDFAIVK|KS 0.061 . Chro.70298 1258 DFAIVKK|SI 0.129 . Chro.70298 1263 KKSINSR|-- 0.123 . ____________________________^_________________

Fasta :-
>Chro.70298 ATGAATACTCCCAAATTTAATTTCATCAAGTGTTTTCTATTAATATTATTTTTTAACCTT GCAACTTTTTTTTTGGTACATGCAGTCGTCTCGGAAAGCACCAGTAGCGTTGACCAATTA AGAGATGAATACTCTATAAGTGAATTTTTGAATGGAAATCAGACTAATGAAGATCATTAT GCCAGCATTGATCGAAATGAATTAGAAACACGGCCATCATTTGATTCAAATAGAGAATCT TTGAATGCACATTTAGAGAACAAATTAACTGGGGTTAATAAACAATCCTTTGTAGAATTT CAAAAGGGAAAACTTTCTAAAAATGACGTCGATATCGAAGAGCTGATTTTTGAAATTGTT AAATTGGCTTTAGATGGAAACGGCAGCCGTGTTTTGCCCTCTCTGGAATTAATTGACTTT TTACAGAAAATTATCGAAACTAGCAAATATAATACAGTAACTACACTAGATTATATATTG GCATTCATTTCGAAAGAAAAGTTTGACACAAGTATTACTCATGATATAAATAGGCTTAGG AATTTTACAGAATATCTTTCATATTTATTAAAATATAATGATAACGGACCAAATAGGATG CTAAACTCTGGTAAGGAAACACTTTCGTTAATAAAGACAAGAATACATTCATCGATTTGG GGAATGGAAGAGCTTATAAGGACAAACAAAATTATGGATTACGAAATTCAAAACTTAGGT GGTAAGACAACATATTCATCTCAACCTGTAATTGGTGAGATCACTAATGAAATTAATTCA AATCAACCAAGAGCAGTATTTAGTTATAAGCTAGTTAAACAGACAATAATTGAAATGTTA GGTACAAATATCAACAAAGTATACAGCAAGCTAAAAAGAATTTATGGAAAAATTACATAT TCAGGATCAAGTAAAAGTAATAAATCAATCTCTCTCAATTTATTATATGCAATATATTTA TCTGCAATAATGATTAATGATTTATATAATCAAGGATTATCATCGAATTTACTTTCTCCA GGGTTTATTTTTATGGTTTTGTTAAGAGATGATATTGAACATCTTCCGAATAACTGGGAG GAAAGGCTAATAAAACGTAGCATAAGCTATGGGATAAACGAAATAGATATTAAAATTCAA GATTCTAAATATTCTAATCTTGAATCCATAATTACCAAAGGTTTCACACATAGCGAATGT AATGCTTCAGTTCTTAGAAGCAACATCCAGGTAGTCTTCAGAAAGTATGGAATTGAATAT TTTAAATTTATGAACGAAGCTCTGAAAAAATACAAAACATTCTTTGTTCCGTCAACAGAT GGTCGAATTAATAGTATTTCGTGGTTTAATAACTATTCTGTTAATGGTTATACTAACAAA TTGAATAAAAAATGGTTTGTTGATATTAATGAACTTGTAATTGAAAATGGAGTTACAAAG GCCGTTGATTTTATGGATGAATTCCATCTACTTGAAATATCTCTTTCTAGAAGTGGCTTG TCTTCCGCGATTATAGTAAGTGAGTCGAAATTATTAAAAGGTACTTTGGTAGAGTATTTG GCTTATAGAATAATTAATGGTAATTCTTCTATTGATCTTAGAGGCTATAGAATAATTAGT ATTCACCTTGAATCATTACTAGAAAGCTGTAAAAATACAAAAAAAAGCTTGACAGAGCAG ATAAAAATTAAATTCGATGAGCTTATGGGAGCATATGATGGTAAGATTATTGTTTTTACA GATAATTTGTTTTCTAGTTTCGAAACTTCCACTGGTTCTAAGAGATTATACGATATTATG AAACATTACATTGTTCTTGGAACTTTGAAAGTGATTGCTACGTTGTCTAATGAGAATTAT AAGATATTGACTGAAAAGGAAATTGAGGTTAAGTCAATATTTTACACAATTGAGATGAAA GAATTGAATGGAATAGTTTCTGAGGTATTCATTTCTGGATTAAGGTACCAACTTGAACTT TCTACTGGAATATTTATTAATAATGATGTAATTCGGGTTTCTGTTTTGATGTGCCATAAA TATATTGAAAATTGTGTCCTTCCAGATGATGCAGTTGAATTGATTAATTTTGCTATTTCA ATGGCAAAGAATGAGCAATTTTTAGAGATCCCATCGGCAATCCATGGAATTGAAGATTTT ATCTCACATTCTAGGATTGGGGCTCAAGTTTCAAAGATGAGAGATTATGAATCCAACTCT ATTATAAGTTCAAATCGTTCGCGTCTATCTGAAGTATTAGCAATGCATCTAAGGATGAGA AACAGAATCGTATCGCTCGCACTAAAGATAAGGCCCTATCTCACTAATTTTAGGTATCTA AAAACCCAGCTTTATTTCATGATGCTTATTAATCTTAATTATCAAACTTCATGTGTTAAC AAGCCAGTAGAAGATGAATTCAAACTACTTGAAAATAGGGAAAAAATAATCCCAAACTTT TCTGAAGAATTAAGTGTTACACAACTTACTAGTTTATATAGGAAAAACCTTCTTAAATAT AAGCAAATTAATAATAAATCTTACAATGAATCTATAAATGATGAAGTTAGCGCTATTACA GAGTCGCAGCTTGACCCCATGTTTTTTGATGACATTCACCAAGTTGTTAAAGACAAGCAA AAGGAAGTTGCCGATATGAAGTCTCTCATACTTGAAATGGCTTTCAACTACAACTCTTTA TATTCACCTCTTGGCATGGGTGAAATTGATGCTTCTCATATAGCATTTATTATTTCAGAA AAGTATGGGAAAAGTATTACTAAACTATTAGATGAAATTGAATATAGAAAATTACCGGAA AGAATGAAAGACCGACTTTCAGAAATTCTTTCGAAGTATGTAATTGGTCAAAAGTCTGCG ATAGACTATGTTTCATTTCATCTAGGAGTGGAATTGTTGAGAAATAATAAAAATAATCCA AGATGCCTTCTTTTTGTAGGCCCATCAGGATCAGGTAAAAAGACATTTGCCCTTGCATTG CAGACCACCTTGGCCGAAAGCTCAGTATTATTTTATGACTTCTCATATGACATAACAATG TATTCTCATTTTAAAATTCTAAAATCCAGCGATTTTGCAGATGCAGATGCAGCAAAGAGG CTATTGGGGGATAATCCTAAAACTGGAATAATTTCAGAAGAGCTAAAGCAAACAGGGAAA ACTGTGTTTTTCTTTGAACATATTGAAAATATGCATCCAGATGTGATTAAACTCATTTTA GATATTCTACATAATAAAGATAATATTAATCATAAAATTGGAAATTTGGGCTCGAGTACA TTTATTCTCACAACCAAAGTTGGGTCTGAAATTATTCTTAAAAATCCTGATCAAATTGAT AGAATCAAGATTCGAGTTGATATAATTAAAAAACTTCGAGAAACTTTCAGTAGTGATCTA GTCCGTTTAATTCAAAACGTTGTTTTATTCAGACCATTCACAAAGGAAGAAGCTTTGAAA ATTCTTGAATTAAATTTCTCAGAATTCTCCGTGCTGATTAAGAAAAATTACAGTACAATA TTCATTCAGCCATCTTTGTTAGTATTAAACAAAATTGTTGATAAGAAGTATTCTCCAGAG TTAGGATATAAGTCAGTTCTAGATTTTTTTGAGAAAGAAGTCAAGGAAAAAGTTTTACAA CTAATTAAAAAGGGCATACTTGTACCATACACAACATTTAAAATTACGATTCGGGACATC TCGTCTGTAGAAGACCCAAATGGATTTAAAATTGACTTTGCAATTGTTAAAAAGTCGATT AATTCTCGCTAA
Download Fasta

Fasta :-

MNTPKFNFIKCFLLILFFNLATFFLVHAVVSESTSSVDQLRDEYSISEFLNGNQTNEDHY ASIDRNELETRPSFDSNRESLNAHLENKLTGVNKQSFVEFQKGKLSKNDVDIEELIFEIV KLALDGNGSRVLPSLELIDFLQKIIETSKYNTVTTLDYILAFISKEKFDTSITHDINRLR NFTEYLSYLLKYNDNGPNRMLNSGKETLSLIKTRIHSSIWGMEELIRTNKIMDYEIQNLG GKTTYSSQPVIGEITNEINSNQPRAVFSYKLVKQTIIEMLGTNINKVYSKLKRIYGKITY SGSSKSNKSISLNLLYAIYLSAIMINDLYNQGLSSNLLSPGFIFMVLLRDDIEHLPNNWE ERLIKRSISYGINEIDIKIQDSKYSNLESIITKGFTHSECNASVLRSNIQVVFRKYGIEY FKFMNEALKKYKTFFVPSTDGRINSISWFNNYSVNGYTNKLNKKWFVDINELVIENGVTK AVDFMDEFHLLEISLSRSGLSSAIIVSESKLLKGTLVEYLAYRIINGNSSIDLRGYRIIS IHLESLLESCKNTKKSLTEQIKIKFDELMGAYDGKIIVFTDNLFSSFETSTGSKRLYDIM KHYIVLGTLKVIATLSNENYKILTEKEIEVKSIFYTIEMKELNGIVSEVFISGLRYQLEL STGIFINNDVIRVSVLMCHKYIENCVLPDDAVELINFAISMAKNEQFLEIPSAIHGIEDF ISHSRIGAQVSKMRDYESNSIISSNRSRLSEVLAMHLRMRNRIVSLALKIRPYLTNFRYL KTQLYFMMLINLNYQTSCVNKPVEDEFKLLENREKIIPNFSEELSVTQLTSLYRKNLLKY KQINNKSYNESINDEVSAITESQLDPMFFDDIHQVVKDKQKEVADMKSLILEMAFNYNSL YSPLGMGEIDASHIAFIISEKYGKSITKLLDEIEYRKLPERMKDRLSEILSKYVIGQKSA IDYVSFHLGVELLRNNKNNPRCLLFVGPSGSGKKTFALALQTTLAESSVLFYDFSYDITM YSHFKILKSSDFADADAAKRLLGDNPKTGIISEELKQTGKTVFFFEHIENMHPDVIKLIL DILHNKDNINHKIGNLGSSTFILTTKVGSEIILKNPDQIDRIKIRVDIIKKLRETFSSDL VRLIQNVVLFRPFTKEEALKILELNFSEFSVLIKKNYSTIFIQPSLLVLNKIVDKKYSPE LGYKSVLDFFEKEVKEKVLQLIKKGILVPYTTFKITIRDISSVEDPNGFKIDFAIVKKSI NSR

Extended AAA-ATPase domain

title: ATP binding site
coordinates: P988,S989,G990,S991,G992,K993,K994,T995,E1066,K1106

No Results

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	Chro.70298	76 S	PSFDSNRES	0.991	unsp	Chro.70298	76 S	PSFDSNRES	0.991	unsp	Chro.70298	76 S	PSFDSNRES	0.991	unsp	Chro.70298	369 S	KRSISYGIN	0.992	unsp	Chro.70298	556 S	NTKKSLTEQ	0.995	unsp	Chro.70298	947 S	KDRLSEILS	0.994	unsp	Chro.70298	1241 S	IRDISSVED	0.996	unsp	Chro.70298	1242 S	RDISSVEDP	0.996	unsp	Chro.70298	35 S	SESTSSVDQ	0.993	unsp	Chro.70298	60 Y	NEDHYASID	0.991	unsp

Chro.70298 | clpB protein

ID's

UniProt_ID:

GEO Functions

Computed_GO_Component_IDs:

Computed_GO_Components:

Computed_GO_Function_IDs:

Computed_GO_Functions:

Computed_GO_Process_IDs:

Computed_GO_Processes:

Curated_GO_Component_IDs:

Curated_GO_Components:

Curated_GO_Function_IDs:

Curated_GO_Functions:

Curated_GO_Processes:

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Extended AAA-ATPase domain

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

Chro.70298

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India