Chro.70339 | F6D8.20

  • Computed_GO_Component_IDs:  GO:0016021      

  • Computed_GO_Components:  integral component of membrane      

  • Computed_GO_Function_IDs:  GO:0004252      

  • Computed_GO_Functions:  serine-type endopeptidase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
Chro.70339OTHER0.9999820.0000100.000008
No Results

  • Fasta :-

    >Chro.70339 MSGRKIFDIQSLNSHTELMDQQMPLREDSSLVLSKEGNSKELDITTESFKFDESDSSENH VVQPKSEENIEGKSSLKNERMIEIKRGKHTPRNSLFLTMFCCIGGDSSVTRLKVSYLATT FFASSIIFVFIQELVISQLTNGYSMIKIPDGYLFGPPPQVVFDMGALDTNLVRNGQLARL FWSFWLHTGFIHLFINLSCQIILGIILETRWVIWRYAILYLLGGISGNLASAVLDPCTIS AGSSACFFALLAGIIVLLLENWRNSRWQFLYVLLVIIASLIGISLSFMSNTDNWAHIGGF VAGLLWSFASMESFSRKSKTLRKSIKSSGKNTIQLPSQDNVQLSLQIKPTDVEVGHSKSQ FEETSIVESISDNEAKNEYLKRRFIPANCACSGGVQTVRVISLLLLLSLLTIGFLFLLYK PLYTKFNLVLGHLSFSGIQKCSCCDSPEGVFWCSSSPTWIRRCG
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/563 Sequence name : 563 Sequence length : 464 VALUES OF COMPUTED PARAMETERS Coef20 : 3.743 CoefTot : -0.116 ChDiff : 3 ZoneTo : 7 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.482 2.747 0.539 0.912 MesoH : 1.008 1.459 0.139 0.560 MuHd_075 : 24.913 8.920 4.971 4.471 MuHd_095 : 17.584 5.434 4.419 3.270 MuHd_100 : 9.243 3.102 2.816 2.290 MuHd_105 : 14.762 8.584 4.314 3.423 Hmax_075 : 6.300 6.300 -0.530 2.791 Hmax_095 : 7.263 4.200 0.009 2.441 Hmax_100 : -1.100 3.900 -2.194 2.410 Hmax_105 : 7.000 9.100 0.438 3.372 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9077 0.0923 DFMC : 0.9081 0.0919
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 464 Chro.70339 MSGRKIFDIQSLNSHTELMDQQMPLREDSSLVLSKEGNSKELDITTESFKFDESDSSENHVVQPKSEENIEGKSSLKNER 80 MIEIKRGKHTPRNSLFLTMFCCIGGDSSVTRLKVSYLATTFFASSIIFVFIQELVISQLTNGYSMIKIPDGYLFGPPPQV 160 VFDMGALDTNLVRNGQLARLFWSFWLHTGFIHLFINLSCQIILGIILETRWVIWRYAILYLLGGISGNLASAVLDPCTIS 240 AGSSACFFALLAGIIVLLLENWRNSRWQFLYVLLVIIASLIGISLSFMSNTDNWAHIGGFVAGLLWSFASMESFSRKSKT 320 LRKSIKSSGKNTIQLPSQDNVQLSLQIKPTDVEVGHSKSQFEETSIVESISDNEAKNEYLKRRFIPANCACSGGVQTVRV 400 ISLLLLLSLLTIGFLFLLYKPLYTKFNLVLGHLSFSGIQKCSCCDSPEGVFWCSSSPTWIRRCG 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................ 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Chro.70339 4 ---MSGR|KI 0.120 . Chro.70339 5 --MSGRK|IF 0.076 . Chro.70339 26 DQQMPLR|ED 0.082 . Chro.70339 35 SSLVLSK|EG 0.065 . Chro.70339 40 SKEGNSK|EL 0.069 . Chro.70339 50 ITTESFK|FD 0.060 . Chro.70339 65 NHVVQPK|SE 0.095 . Chro.70339 73 EENIEGK|SS 0.104 . Chro.70339 77 EGKSSLK|NE 0.057 . Chro.70339 80 SSLKNER|MI 0.121 . Chro.70339 85 ERMIEIK|RG 0.061 . Chro.70339 86 RMIEIKR|GK 0.181 . Chro.70339 88 IEIKRGK|HT 0.062 . Chro.70339 92 RGKHTPR|NS 0.086 . Chro.70339 111 GDSSVTR|LK 0.117 . Chro.70339 113 SSVTRLK|VS 0.060 . Chro.70339 147 NGYSMIK|IP 0.064 . Chro.70339 173 LDTNLVR|NG 0.068 . Chro.70339 179 RNGQLAR|LF 0.081 . Chro.70339 210 GIILETR|WV 0.102 . Chro.70339 215 TRWVIWR|YA 0.139 . Chro.70339 263 LLLENWR|NS 0.075 . Chro.70339 266 ENWRNSR|WQ 0.147 . Chro.70339 316 SMESFSR|KS 0.080 . Chro.70339 317 MESFSRK|SK 0.131 . Chro.70339 319 SFSRKSK|TL 0.238 . Chro.70339 322 RKSKTLR|KS 0.118 . Chro.70339 323 KSKTLRK|SI 0.147 . Chro.70339 326 TLRKSIK|SS 0.162 . Chro.70339 330 SIKSSGK|NT 0.073 . Chro.70339 348 QLSLQIK|PT 0.086 . Chro.70339 358 VEVGHSK|SQ 0.080 . Chro.70339 376 ISDNEAK|NE 0.065 . Chro.70339 381 AKNEYLK|RR 0.056 . Chro.70339 382 KNEYLKR|RF 0.178 . Chro.70339 383 NEYLKRR|FI 0.206 . Chro.70339 399 GGVQTVR|VI 0.084 . Chro.70339 420 FLFLLYK|PL 0.069 . Chro.70339 425 YKPLYTK|FN 0.059 . Chro.70339 440 SFSGIQK|CS 0.064 . Chro.70339 461 SSPTWIR|RC 0.097 . Chro.70339 462 SPTWIRR|CG 0.144 . ____________________________^_________________

  • Fasta :-

    >Chro.70339 ATGTCTGGCAGAAAGATTTTTGATATTCAGTCTTTAAATAGTCATACAGAGTTAATGGAC CAACAGATGCCCTTACGTGAAGATAGTTCGTTAGTGCTATCTAAAGAAGGTAATAGTAAG GAGTTGGATATAACCACAGAATCATTTAAATTTGATGAAAGTGATAGTTCCGAAAATCAT GTTGTACAACCAAAATCAGAAGAAAATATTGAAGGTAAAAGTTCACTAAAAAATGAAAGA ATGATCGAAATTAAACGTGGCAAACACACACCTAGGAATTCACTCTTTTTAACGATGTTT TGTTGTATTGGTGGTGACTCAAGTGTAACAAGGCTTAAAGTTTCATATTTGGCTACAACC TTTTTTGCATCTAGTATTATTTTTGTTTTTATACAAGAGCTAGTAATTAGTCAGCTTACG AACGGGTATTCCATGATAAAAATACCTGATGGATATTTGTTTGGACCTCCTCCTCAGGTA GTTTTTGATATGGGAGCATTAGATACGAATCTCGTTAGAAATGGGCAGTTGGCTCGACTC TTTTGGTCATTTTGGCTTCACACTGGATTTATCCATCTCTTCATTAATCTTTCATGTCAA ATAATACTTGGCATTATTCTAGAGACTCGCTGGGTTATATGGAGATATGCGATACTTTAC TTATTGGGTGGTATTTCTGGTAATTTAGCCTCTGCAGTCTTGGATCCATGCACAATTTCT GCCGGCTCATCAGCTTGCTTCTTTGCGCTTTTGGCAGGGATTATTGTATTACTATTAGAA AATTGGAGAAATTCTCGGTGGCAATTTTTATACGTTCTATTAGTTATTATTGCCTCTTTA ATAGGAATTTCCTTAAGTTTCATGTCAAACACAGATAATTGGGCCCATATCGGTGGATTT GTTGCAGGACTATTATGGTCTTTTGCAAGCATGGAGTCATTTTCAAGAAAATCCAAAACT TTACGTAAATCAATAAAATCTTCAGGAAAAAATACGATTCAATTGCCAAGTCAAGATAAT GTTCAGCTTTCACTTCAAATCAAGCCAACTGATGTTGAAGTTGGTCATTCCAAAAGCCAG TTTGAAGAAACTTCAATAGTAGAATCTATTTCTGATAACGAAGCTAAAAATGAATATCTT AAAAGACGCTTTATCCCAGCAAATTGCGCCTGCAGCGGCGGTGTTCAAACTGTCAGGGTT ATTTCATTACTATTATTATTATCGTTACTAACTATTGGGTTTTTGTTTTTGTTATATAAG CCATTGTACACAAAGTTCAATTTGGTTTTAGGCCATCTCTCATTCTCAGGCATACAAAAA TGCAGTTGCTGCGATTCACCTGAAGGTGTATTCTGGTGCTCGAGTTCCCCAACATGGATT AGAAGATGTGGATAA
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  • Fasta :-

    MSGRKIFDIQSLNSHTELMDQQMPLREDSSLVLSKEGNSKELDITTESFKFDESDSSENH VVQPKSEENIEGKSSLKNERMIEIKRGKHTPRNSLFLTMFCCIGGDSSVTRLKVSYLATT FFASSIIFVFIQELVISQLTNGYSMIKIPDGYLFGPPPQVVFDMGALDTNLVRNGQLARL FWSFWLHTGFIHLFINLSCQIILGIILETRWVIWRYAILYLLGGISGNLASAVLDPCTIS AGSSACFFALLAGIIVLLLENWRNSRWQFLYVLLVIIASLIGISLSFMSNTDNWAHIGGF VAGLLWSFASMESFSRKSKTLRKSIKSSGKNTIQLPSQDNVQLSLQIKPTDVEVGHSKSQ FEETSIVESISDNEAKNEYLKRRFIPANCACSGGVQTVRVISLLLLLSLLTIGFLFLLYK PLYTKFNLVLGHLSFSGIQKCSCCDSPEGVFWCSSSPTWIRRCG

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
Chro.7033975 SEGKSSLKNE0.996unspChro.7033975 SEGKSSLKNE0.996unspChro.7033975 SEGKSSLKNE0.996unspChro.70339324 STLRKSIKSS0.998unspChro.70339328 SSIKSSGKNT0.996unspChro.70339369 SSIVESISDN0.997unspChro.7033956 SDESDSSENH0.995unspChro.7033966 SVQPKSEENI0.992unsp

Chro.70339      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India