Chro.70444 | autophagy 8i

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_IDPredictionOTHERSPmTPCS_Position
Chro.70444OTHER0.9577660.0035180.038716
No Results

  • Fasta :-

    >Chro.70444 MNMLVGEFKYIIHKHITQSSNNQNSGIKIPVPYEKTIYLFVNNTIPKAGSLMQEVYEQYV SDDGFLYVEYSSENAFGGYHSII
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/696 Sequence name : 696 Sequence length : 83 VALUES OF COMPUTED PARAMETERS Coef20 : 3.594 CoefTot : -3.803 ChDiff : -3 ZoneTo : 53 KR : 5 DE : 2 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.459 0.641 -0.188 0.358 MesoH : -1.028 -0.271 -0.581 0.128 MuHd_075 : 32.304 24.001 11.482 8.044 MuHd_095 : 31.295 27.946 9.965 7.380 MuHd_100 : 26.981 24.020 9.023 6.681 MuHd_105 : 29.350 19.695 9.616 7.112 Hmax_075 : 7.300 8.100 0.883 3.911 Hmax_095 : 17.413 18.800 3.143 6.740 Hmax_100 : 7.400 15.800 1.021 3.470 Hmax_105 : 1.300 1.283 -0.329 2.158 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6518 0.3482 DFMC : 0.8234 0.1766
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 83 Chro.70444 MNMLVGEFKYIIHKHITQSSNNQNSGIKIPVPYEKTIYLFVNNTIPKAGSLMQEVYEQYVSDDGFLYVEYSSENAFGGYH 80 SII 160 ................................................................................ 80 ... 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Chro.70444 9 MLVGEFK|YI 0.080 . Chro.70444 14 FKYIIHK|HI 0.069 . Chro.70444 28 NQNSGIK|IP 0.064 . Chro.70444 35 IPVPYEK|TI 0.067 . Chro.70444 47 VNNTIPK|AG 0.068 . ____________________________^_________________

  • Fasta :-

    >Chro.70444 ATGAATATGTTGGTTGGAGAATTCAAGTATATAATTCATAAGCATATTACTCAATCTTCT AATAATCAAAATAGTGGAATTAAAATACCTGTACCATACGAGAAGACCATATATTTATTT GTGAATAATACGATACCCAAGGCTGGGTCGTTAATGCAAGAAGTATACGAGCAATATGTT TCTGATGACGGGTTCCTATATGTAGAATATAGCTCTGAAAATGCATTTGGTGGATATCAT TCCATTATCTAG
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  • Fasta :-

    MNMLVGEFKYIIHKHITQSSNNQNSGIKIPVPYEKTIYLFVNNTIPKAGSLMQEVYEQYV SDDGFLYVEYSSENAFGGYHSII

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Chro.70444      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India