Chro.80395 | aminopeptidase N

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008237      GO:0008270      

  • Computed_GO_Functions:  metallopeptidase activity      zinc ion binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
Chro.80395OTHER0.9848510.0081340.007014
No Results

  • Fasta :-

    >Chro.80395 MGNLFGKCGCRDLTICNLNVLRPAHSQDRIYRKEYKVPNFLIDHVNLDINIKDDVTVVSS VIIMRRNPNSSFRGDLSLDGDCLKLVSVKLNGIILEKSLYKGYFQPDGPDGKLVISSNLL PNKDQQFTLETVVEIFPDKNTKNMGLYYSAGVYSTQCESDGFRRITFFLDRPDVMCKFRV RIEGDKTKSPVLLSNGNLLEKGDVQGSENRHFAIFVDPFPKPCYLFAVVAGVLGRLEDKF ITKSGKTVRLFVYSEPKYVDRLRLAMESLKLAMKWDEDRFGLEYDLEIFNIVAVESFNFG AMENKSLNIFNCSCLLASENITPDYFFTNILSTVGHEYFHNYTGNRVTCRDWFQLTLKEG LTVYRDQEFSRDCIDRLSEQLGDIEVLRNYQFQEDSGPLAHPIRPDSIVSTNNLYTSTVY RKGAEVVRMYETILGREGFRKGIDLYFARHDGQAVTCDDFRKAMEDANNYNFTQFERWYD QAGTPEVEVVSIDHNKAEGTCSITLRQRCSPTPEQPKKRPFYIPVIVGLIGKDSCKEIRQ SETLILKEQQQTFILDGVWETPVASILRGFSAPVNLRFKTPRSDEELAFLFAFDTDEYNR FDAAQTLYKKILIQASTNSSQEISPSSVIESILSQTILSCFESFISKIKTSKNPNGTVSP MVASYTLRIPSYSQVLASIAEPNFDFVVESFNALTIAFASKFKTQIVDLFQVLTEDLSAL PSQSPFIHGKGVNVEAIAIRRLLNILLDFIAKLDPSLGTKLAFEQHNRFDYMTSKLGAIS ALQIADHKSSECIQALDSLLLATSDDVSTLNQYFSIQASCLIPDNVERVINIYYSNPQFI KHRENPTIFSSLVGTFASNFVAFNRKDGLGYSFVADAIILMDKVNPMSAASVSRAFTKVL KLDEGRRNLLKENVVRILQSPGLSKDTSEILNSIDF
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/817 Sequence name : 817 Sequence length : 936 VALUES OF COMPUTED PARAMETERS Coef20 : 3.840 CoefTot : -1.139 ChDiff : -10 ZoneTo : 27 KR : 3 DE : 1 CleavSite : 21 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.735 1.429 0.172 0.576 MesoH : -0.052 0.654 -0.256 0.291 MuHd_075 : 38.135 21.478 10.259 7.243 MuHd_095 : 36.043 16.789 8.873 8.263 MuHd_100 : 32.012 16.521 8.555 7.032 MuHd_105 : 28.907 14.919 8.860 5.087 Hmax_075 : 16.800 15.283 4.555 5.752 Hmax_095 : 9.713 12.200 3.240 4.349 Hmax_100 : 8.300 12.200 3.395 3.870 Hmax_105 : 8.200 11.900 2.784 3.380 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.4535 0.5465 DFMC : 0.3635 0.6365 This protein is probably imported in mitochondria. f(Ser) = 0.0370 f(Arg) = 0.0741 CMi = 0.21322 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 936 Chro.80395 MGNLFGKCGCRDLTICNLNVLRPAHSQDRIYRKEYKVPNFLIDHVNLDINIKDDVTVVSSVIIMRRNPNSSFRGDLSLDG 80 DCLKLVSVKLNGIILEKSLYKGYFQPDGPDGKLVISSNLLPNKDQQFTLETVVEIFPDKNTKNMGLYYSAGVYSTQCESD 160 GFRRITFFLDRPDVMCKFRVRIEGDKTKSPVLLSNGNLLEKGDVQGSENRHFAIFVDPFPKPCYLFAVVAGVLGRLEDKF 240 ITKSGKTVRLFVYSEPKYVDRLRLAMESLKLAMKWDEDRFGLEYDLEIFNIVAVESFNFGAMENKSLNIFNCSCLLASEN 320 ITPDYFFTNILSTVGHEYFHNYTGNRVTCRDWFQLTLKEGLTVYRDQEFSRDCIDRLSEQLGDIEVLRNYQFQEDSGPLA 400 HPIRPDSIVSTNNLYTSTVYRKGAEVVRMYETILGREGFRKGIDLYFARHDGQAVTCDDFRKAMEDANNYNFTQFERWYD 480 QAGTPEVEVVSIDHNKAEGTCSITLRQRCSPTPEQPKKRPFYIPVIVGLIGKDSCKEIRQSETLILKEQQQTFILDGVWE 560 TPVASILRGFSAPVNLRFKTPRSDEELAFLFAFDTDEYNRFDAAQTLYKKILIQASTNSSQEISPSSVIESILSQTILSC 640 FESFISKIKTSKNPNGTVSPMVASYTLRIPSYSQVLASIAEPNFDFVVESFNALTIAFASKFKTQIVDLFQVLTEDLSAL 720 PSQSPFIHGKGVNVEAIAIRRLLNILLDFIAKLDPSLGTKLAFEQHNRFDYMTSKLGAISALQIADHKSSECIQALDSLL 800 LATSDDVSTLNQYFSIQASCLIPDNVERVINIYYSNPQFIKHRENPTIFSSLVGTFASNFVAFNRKDGLGYSFVADAIIL 880 MDKVNPMSAASVSRAFTKVLKLDEGRRNLLKENVVRILQSPGLSKDTSEILNSIDF 960 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ........................................................ 960 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Chro.80395 7 MGNLFGK|CG 0.068 . Chro.80395 11 FGKCGCR|DL 0.095 . Chro.80395 22 CNLNVLR|PA 0.096 . Chro.80395 29 PAHSQDR|IY 0.097 . Chro.80395 32 SQDRIYR|KE 0.229 . Chro.80395 33 QDRIYRK|EY 0.079 . Chro.80395 36 IYRKEYK|VP 0.062 . Chro.80395 52 NLDINIK|DD 0.065 . Chro.80395 65 SSVIIMR|RN 0.074 . Chro.80395 66 SVIIMRR|NP 0.116 . Chro.80395 73 NPNSSFR|GD 0.094 . Chro.80395 84 LDGDCLK|LV 0.083 . Chro.80395 89 LKLVSVK|LN 0.073 . Chro.80395 97 NGIILEK|SL 0.084 . Chro.80395 101 LEKSLYK|GY 0.062 . Chro.80395 112 PDGPDGK|LV 0.067 . Chro.80395 123 SNLLPNK|DQ 0.070 . Chro.80395 139 VEIFPDK|NT 0.060 . Chro.80395 142 FPDKNTK|NM 0.065 . Chro.80395 163 CESDGFR|RI 0.088 . Chro.80395 164 ESDGFRR|IT 0.106 . Chro.80395 171 ITFFLDR|PD 0.069 . Chro.80395 177 RPDVMCK|FR 0.069 . Chro.80395 179 DVMCKFR|VR 0.096 . Chro.80395 181 MCKFRVR|IE 0.110 . Chro.80395 186 VRIEGDK|TK 0.068 . Chro.80395 188 IEGDKTK|SP 0.069 . Chro.80395 201 NGNLLEK|GD 0.062 . Chro.80395 210 VQGSENR|HF 0.078 . Chro.80395 221 FVDPFPK|PC 0.055 . Chro.80395 235 VAGVLGR|LE 0.084 . Chro.80395 239 LGRLEDK|FI 0.083 . Chro.80395 243 EDKFITK|SG 0.074 . Chro.80395 246 FITKSGK|TV 0.070 . Chro.80395 249 KSGKTVR|LF 0.101 . Chro.80395 257 FVYSEPK|YV 0.081 . Chro.80395 261 EPKYVDR|LR 0.085 . Chro.80395 263 KYVDRLR|LA 0.103 . Chro.80395 270 LAMESLK|LA 0.064 . Chro.80395 274 SLKLAMK|WD 0.066 . Chro.80395 279 MKWDEDR|FG 0.079 . Chro.80395 305 FGAMENK|SL 0.079 . Chro.80395 346 HNYTGNR|VT 0.082 . Chro.80395 350 GNRVTCR|DW 0.170 . Chro.80395 358 WFQLTLK|EG 0.059 . Chro.80395 365 EGLTVYR|DQ 0.104 . Chro.80395 371 RDQEFSR|DC 0.131 . Chro.80395 376 SRDCIDR|LS 0.127 . Chro.80395 388 GDIEVLR|NY 0.100 . Chro.80395 404 PLAHPIR|PD 0.101 . Chro.80395 421 YTSTVYR|KG 0.105 . Chro.80395 422 TSTVYRK|GA 0.141 . Chro.80395 428 KGAEVVR|MY 0.125 . Chro.80395 436 YETILGR|EG 0.073 . Chro.80395 440 LGREGFR|KG 0.074 . Chro.80395 441 GREGFRK|GI 0.130 . Chro.80395 449 IDLYFAR|HD 0.132 . Chro.80395 461 VTCDDFR|KA 0.080 . Chro.80395 462 TCDDFRK|AM 0.101 . Chro.80395 477 NFTQFER|WY 0.102 . Chro.80395 496 VSIDHNK|AE 0.073 . Chro.80395 506 TCSITLR|QR 0.098 . Chro.80395 508 SITLRQR|CS 0.074 . Chro.80395 517 PTPEQPK|KR 0.056 . Chro.80395 518 TPEQPKK|RP 0.113 . Chro.80395 519 PEQPKKR|PF 0.187 . Chro.80395 532 IVGLIGK|DS 0.078 . Chro.80395 536 IGKDSCK|EI 0.082 . Chro.80395 539 DSCKEIR|QS 0.098 . Chro.80395 547 SETLILK|EQ 0.053 . Chro.80395 568 PVASILR|GF 0.092 . Chro.80395 577 SAPVNLR|FK 0.080 . Chro.80395 579 PVNLRFK|TP 0.059 . Chro.80395 582 LRFKTPR|SD 0.193 . Chro.80395 600 DTDEYNR|FD 0.076 . Chro.80395 609 AAQTLYK|KI 0.063 . Chro.80395 610 AQTLYKK|IL 0.087 . Chro.80395 647 FESFISK|IK 0.064 . Chro.80395 649 SFISKIK|TS 0.060 . Chro.80395 652 SKIKTSK|NP 0.061 . Chro.80395 668 VASYTLR|IP 0.101 . Chro.80395 701 TIAFASK|FK 0.087 . Chro.80395 703 AFASKFK|TQ 0.065 . Chro.80395 730 SPFIHGK|GV 0.101 . Chro.80395 740 VEAIAIR|RL 0.090 . Chro.80395 741 EAIAIRR|LL 0.108 . Chro.80395 752 LLDFIAK|LD 0.056 . Chro.80395 760 DPSLGTK|LA 0.073 . Chro.80395 768 AFEQHNR|FD 0.074 . Chro.80395 775 FDYMTSK|LG 0.059 . Chro.80395 788 LQIADHK|SS 0.077 . Chro.80395 828 IPDNVER|VI 0.095 . Chro.80395 841 SNPQFIK|HR 0.060 . Chro.80395 843 PQFIKHR|EN 0.100 . Chro.80395 865 NFVAFNR|KD 0.089 . Chro.80395 866 FVAFNRK|DG 0.076 . Chro.80395 883 AIILMDK|VN 0.055 . Chro.80395 894 SAASVSR|AF 0.142 . Chro.80395 898 VSRAFTK|VL 0.067 . Chro.80395 901 AFTKVLK|LD 0.058 . Chro.80395 906 LKLDEGR|RN 0.074 . Chro.80395 907 KLDEGRR|NL 0.097 . Chro.80395 911 GRRNLLK|EN 0.065 . Chro.80395 916 LKENVVR|IL 0.089 . Chro.80395 925 QSPGLSK|DT 0.097 . ____________________________^_________________

  • Fasta :-

    >Chro.80395 ATGGGCAATTTATTCGGAAAGTGTGGCTGTAGGGATTTGACAATATGTAACCTAAATGTA TTAAGACCTGCTCACTCTCAGGATCGTATTTATCGCAAAGAATATAAAGTTCCAAATTTT TTAATTGATCATGTTAACTTGGATATTAATATAAAAGACGACGTAACTGTTGTTTCTTCA GTAATAATCATGAGAAGAAATCCAAATTCATCTTTTAGAGGTGACTTATCATTGGATGGC GATTGCTTGAAACTTGTTTCAGTAAAACTGAACGGCATAATTTTAGAAAAGAGTCTGTAT AAGGGTTACTTTCAACCCGATGGCCCTGATGGTAAGCTTGTTATTTCAAGTAATTTATTA CCAAATAAAGATCAGCAGTTTACACTCGAGACAGTTGTTGAAATTTTTCCTGATAAAAAT ACCAAGAATATGGGATTGTATTATTCTGCAGGAGTTTATTCCACGCAGTGCGAATCGGAT GGCTTCAGAAGGATAACATTTTTCTTAGATAGACCCGACGTAATGTGTAAGTTTAGGGTT AGAATTGAAGGAGATAAAACTAAATCTCCCGTATTGTTATCAAATGGAAATTTGCTAGAA AAAGGTGACGTTCAGGGCTCTGAAAATCGGCACTTTGCCATATTTGTGGATCCTTTTCCC AAACCTTGTTATCTTTTTGCGGTTGTTGCTGGAGTTTTGGGAAGATTGGAGGACAAGTTT ATAACAAAGTCTGGAAAGACTGTCAGGCTTTTTGTGTACAGTGAGCCCAAATATGTAGAT AGGTTGAGATTGGCAATGGAGTCCTTGAAGCTAGCAATGAAATGGGATGAAGACCGCTTT GGCTTGGAATATGATCTTGAAATTTTTAATATTGTAGCAGTTGAGTCTTTCAATTTTGGT GCAATGGAAAATAAGAGCTTGAACATTTTTAACTGCTCTTGTCTTCTAGCATCAGAGAAT ATCACCCCTGACTATTTTTTCACAAACATCCTTTCAACAGTTGGGCATGAGTACTTTCAT AACTACACAGGTAATAGAGTTACGTGTAGAGATTGGTTCCAACTTACTTTGAAAGAAGGT TTGACAGTCTATAGAGACCAAGAGTTTTCTCGTGACTGTATTGATAGGTTATCTGAACAG TTAGGAGACATAGAGGTGTTGCGCAACTACCAGTTCCAGGAAGACTCGGGGCCGCTTGCA CATCCTATTAGGCCAGATTCCATTGTTTCAACAAATAATTTATATACAAGCACAGTATAT AGGAAGGGGGCAGAAGTTGTAAGGATGTATGAGACTATCCTTGGTCGTGAGGGATTCCGC AAAGGTATTGATCTTTACTTTGCTCGCCATGATGGCCAGGCAGTCACTTGTGATGACTTC AGAAAAGCTATGGAAGACGCTAATAATTATAATTTCACACAATTTGAGCGCTGGTACGAC CAAGCTGGCACACCTGAAGTTGAGGTTGTTTCTATTGATCACAACAAAGCGGAGGGAACA TGTTCAATTACACTTCGACAACGCTGTAGTCCTACTCCAGAGCAACCTAAAAAAAGACCA TTTTATATTCCAGTTATAGTGGGGCTAATTGGAAAGGATTCATGCAAAGAAATAAGACAG TCGGAAACACTAATTCTCAAAGAACAGCAACAGACATTTATTCTAGATGGAGTTTGGGAG ACACCAGTTGCATCGATCCTTAGGGGTTTCTCAGCGCCAGTAAATTTAAGGTTTAAAACA CCTCGTTCAGATGAGGAGTTGGCATTTCTTTTTGCATTTGATACAGACGAATATAATCGT TTTGATGCAGCTCAAACATTATATAAAAAAATTCTGATCCAAGCATCTACCAACTCTTCA CAAGAAATTTCGCCTAGTTCGGTAATAGAGAGCATTCTTTCACAAACTATTCTCAGTTGT TTTGAATCGTTTATTTCAAAAATTAAGACGTCTAAAAATCCAAATGGTACTGTTTCTCCA ATGGTTGCGTCATACACGCTTAGAATCCCGAGTTATTCCCAAGTTTTGGCTTCTATTGCA GAACCAAACTTCGATTTTGTTGTCGAGTCTTTTAATGCATTAACAATTGCCTTTGCATCG AAGTTTAAGACTCAAATAGTAGATTTATTCCAAGTTCTTACTGAAGATTTGTCGGCGTTG CCTTCTCAGAGCCCATTCATTCATGGCAAAGGTGTAAATGTTGAAGCTATTGCAATCCGT AGATTATTAAATATTTTACTAGACTTTATTGCAAAACTTGATCCTAGCCTTGGCACTAAA TTGGCTTTTGAGCAACACAATCGTTTTGATTATATGACAAGTAAGCTTGGTGCAATATCA GCACTACAAATAGCAGATCATAAATCCAGTGAATGTATTCAAGCTTTGGATTCTTTGTTA CTTGCAACTTCAGATGACGTTTCGACCTTGAATCAATATTTCTCCATTCAGGCAAGTTGT CTTATCCCTGATAATGTTGAGCGTGTAATAAATATTTACTATTCTAACCCACAATTTATT AAACATCGTGAAAACCCAACAATCTTCTCCTCTTTGGTTGGCACTTTTGCATCGAATTTT GTTGCGTTCAACAGGAAAGATGGGCTTGGGTATTCTTTTGTTGCAGATGCGATAATTTTA ATGGATAAAGTAAACCCAATGTCAGCTGCGTCTGTTTCGAGAGCATTTACAAAGGTCTTG AAACTTGATGAGGGAAGACGCAATCTTCTTAAGGAGAATGTCGTTAGAATACTTCAATCC CCCGGTTTATCGAAAGATACGTCTGAAATCCTAAATTCCATCGATTTTTGA
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  • Fasta :-

    MGNLFGKCGCRDLTICNLNVLRPAHSQDRIYRKEYKVPNFLIDHVNLDINIKDDVTVVSS VIIMRRNPNSSFRGDLSLDGDCLKLVSVKLNGIILEKSLYKGYFQPDGPDGKLVISSNLL PNKDQQFTLETVVEIFPDKNTKNMGLYYSAGVYSTQCESDGFRRITFFLDRPDVMCKFRV RIEGDKTKSPVLLSNGNLLEKGDVQGSENRHFAIFVDPFPKPCYLFAVVAGVLGRLEDKF ITKSGKTVRLFVYSEPKYVDRLRLAMESLKLAMKWDEDRFGLEYDLEIFNIVAVESFNFG AMENKSLNIFNCSCLLASENITPDYFFTNILSTVGHEYFHNYTGNRVTCRDWFQLTLKEG LTVYRDQEFSRDCIDRLSEQLGDIEVLRNYQFQEDSGPLAHPIRPDSIVSTNNLYTSTVY RKGAEVVRMYETILGREGFRKGIDLYFARHDGQAVTCDDFRKAMEDANNYNFTQFERWYD QAGTPEVEVVSIDHNKAEGTCSITLRQRCSPTPEQPKKRPFYIPVIVGLIGKDSCKEIRQ SETLILKEQQQTFILDGVWETPVASILRGFSAPVNLRFKTPRSDEELAFLFAFDTDEYNR FDAAQTLYKKILIQASTNSSQEISPSSVIESILSQTILSCFESFISKIKTSKNPNGTVSP MVASYTLRIPSYSQVLASIAEPNFDFVVESFNALTIAFASKFKTQIVDLFQVLTEDLSAL PSQSPFIHGKGVNVEAIAIRRLLNILLDFIAKLDPSLGTKLAFEQHNRFDYMTSKLGAIS ALQIADHKSSECIQALDSLLLATSDDVSTLNQYFSIQASCLIPDNVERVINIYYSNPQFI KHRENPTIFSSLVGTFASNFVAFNRKDGLGYSFVADAIILMDKVNPMSAASVSRAFTKVL KLDEGRRNLLKENVVRILQSPGLSKDTSEILNSIDF

  • title: Zn binding site
  • coordinates: H336,H340,E359
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
Chro.80395580 TLRFKTPRSD0.991unspChro.80395580 TLRFKTPRSD0.991unspChro.80395580 TLRFKTPRSD0.991unspChro.80395583 SKTPRSDEEL0.997unspChro.80395627 SISPSSVIES0.995unspChro.80395258 YSEPKYVDRL0.993unspChro.80395534 SIGKDSCKEI0.993unsp

Chro.80395      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India