Chro.80498 | hypothetical protein

_IDPredictionOTHERSPmTPCS_Position
Chro.80498OTHER0.9985230.0002590.001217
No Results

  • Fasta :-

    >Chro.80498 MASILGQEAEKRQDSHPVTLQLSNRLVNFVSGGFLANKTGIESPSYVSDNSQISDKTQKH MDKLKEKEQIENNVPLAKPEYYYFPPELLTDARDFLEPKEISQFRPYGRGLANPGWNTCY FNSILQALTYAPYLSIDCLRRNHQKICKHMKEHLVCIMCMFEDHVNIMLDNTSKSNIKND QPVVSSFIKCAQKLIWKRFRIGMMHDAQEFLRYFLEALHKSCLPKNLQTDQTFRKIHPIA ASTTYIGQLFCGFFLSRIVCHNCQYTSNTYDPFMDVPLDIMGVSNLENALKLFTKIEYLK GENRYMCPKCNQRSDASKQLLIEKLPPLLTIQLKRFSYVGHGSRKPNKAINFSDVLDLQP YISSKTYSESSYIYKLWAVVCHSGNTLSCGHYYTHAKSIDNKWYCFNDDYVKPTRIENVL NENHKAYLLFYYRSDFNKYDLLKDSGVSIESLEKSQIITPLAPEISFINLQLKSNSKSSV NGKNNNSKESSNSEPNLNEFLDQLLTNKSKGERDLAQNQDQDQYQDPNLQFYQNQQNNNN IRLVLNPIINTDVNNEKLDSKISIISKNKQTEKIIKAKICNFKLRSLLLCDNWITRSKSR RNLATIFYLKKLKKLGLSMSYFIKSKSGNCLNGKVLISNINKSQIDTWEDLNLSNDTITS LEQAQKSLLAR
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/42 Sequence name : 42 Sequence length : 671 VALUES OF COMPUTED PARAMETERS Coef20 : 3.474 CoefTot : -0.030 ChDiff : 20 ZoneTo : 7 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.665 1.371 0.273 0.601 MesoH : -0.497 0.203 -0.359 0.186 MuHd_075 : 15.247 16.193 6.016 5.041 MuHd_095 : 13.387 6.197 2.895 3.191 MuHd_100 : 10.703 8.218 2.044 1.306 MuHd_105 : 10.121 12.652 3.061 1.379 Hmax_075 : -3.733 8.517 -1.791 3.010 Hmax_095 : 2.712 0.800 -2.626 2.039 Hmax_100 : -0.300 -1.100 -3.137 1.690 Hmax_105 : -2.683 0.500 -3.999 0.338 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8956 0.1044 DFMC : 0.8735 0.1265
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 671 Chro.80498 MASILGQEAEKRQDSHPVTLQLSNRLVNFVSGGFLANKTGIESPSYVSDNSQISDKTQKHMDKLKEKEQIENNVPLAKPE 80 YYYFPPELLTDARDFLEPKEISQFRPYGRGLANPGWNTCYFNSILQALTYAPYLSIDCLRRNHQKICKHMKEHLVCIMCM 160 FEDHVNIMLDNTSKSNIKNDQPVVSSFIKCAQKLIWKRFRIGMMHDAQEFLRYFLEALHKSCLPKNLQTDQTFRKIHPIA 240 ASTTYIGQLFCGFFLSRIVCHNCQYTSNTYDPFMDVPLDIMGVSNLENALKLFTKIEYLKGENRYMCPKCNQRSDASKQL 320 LIEKLPPLLTIQLKRFSYVGHGSRKPNKAINFSDVLDLQPYISSKTYSESSYIYKLWAVVCHSGNTLSCGHYYTHAKSID 400 NKWYCFNDDYVKPTRIENVLNENHKAYLLFYYRSDFNKYDLLKDSGVSIESLEKSQIITPLAPEISFINLQLKSNSKSSV 480 NGKNNNSKESSNSEPNLNEFLDQLLTNKSKGERDLAQNQDQDQYQDPNLQFYQNQQNNNNIRLVLNPIINTDVNNEKLDS 560 KISIISKNKQTEKIIKAKICNFKLRSLLLCDNWITRSKSRRNLATIFYLKKLKKLGLSMSYFIKSKSGNCLNGKVLISNI 640 NKSQIDTWEDLNLSNDTITSLEQAQKSLLAR 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ............................... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Chro.80498 11 LGQEAEK|RQ 0.060 . Chro.80498 12 GQEAEKR|QD 0.171 . Chro.80498 25 TLQLSNR|LV 0.124 . Chro.80498 38 GGFLANK|TG 0.057 . Chro.80498 56 NSQISDK|TQ 0.063 . Chro.80498 59 ISDKTQK|HM 0.066 . Chro.80498 63 TQKHMDK|LK 0.073 . Chro.80498 65 KHMDKLK|EK 0.094 . Chro.80498 67 MDKLKEK|EQ 0.062 . Chro.80498 78 NNVPLAK|PE 0.064 . Chro.80498 93 ELLTDAR|DF 0.080 . Chro.80498 99 RDFLEPK|EI 0.075 . Chro.80498 105 KEISQFR|PY 0.151 . Chro.80498 109 QFRPYGR|GL 0.101 . Chro.80498 140 LSIDCLR|RN 0.093 . Chro.80498 141 SIDCLRR|NH 0.119 . Chro.80498 145 LRRNHQK|IC 0.079 . Chro.80498 148 NHQKICK|HM 0.068 . Chro.80498 151 KICKHMK|EH 0.072 . Chro.80498 174 MLDNTSK|SN 0.074 . Chro.80498 178 TSKSNIK|ND 0.068 . Chro.80498 189 VVSSFIK|CA 0.074 . Chro.80498 193 FIKCAQK|LI 0.062 . Chro.80498 197 AQKLIWK|RF 0.060 . Chro.80498 198 QKLIWKR|FR 0.180 . Chro.80498 200 LIWKRFR|IG 0.094 . Chro.80498 212 DAQEFLR|YF 0.105 . Chro.80498 220 FLEALHK|SC 0.072 . Chro.80498 225 HKSCLPK|NL 0.081 . Chro.80498 234 QTDQTFR|KI 0.101 . Chro.80498 235 TDQTFRK|IH 0.089 . Chro.80498 257 CGFFLSR|IV 0.093 . Chro.80498 291 NLENALK|LF 0.065 . Chro.80498 295 ALKLFTK|IE 0.062 . Chro.80498 300 TKIEYLK|GE 0.061 . Chro.80498 304 YLKGENR|YM 0.092 . Chro.80498 309 NRYMCPK|CN 0.071 . Chro.80498 313 CPKCNQR|SD 0.110 . Chro.80498 318 QRSDASK|QL 0.075 . Chro.80498 324 KQLLIEK|LP 0.053 . Chro.80498 334 LLTIQLK|RF 0.074 . Chro.80498 335 LTIQLKR|FS 0.220 . Chro.80498 344 YVGHGSR|KP 0.077 . Chro.80498 345 VGHGSRK|PN 0.095 . Chro.80498 348 GSRKPNK|AI 0.074 . Chro.80498 365 QPYISSK|TY 0.067 . Chro.80498 375 ESSYIYK|LW 0.074 . Chro.80498 397 HYYTHAK|SI 0.107 . Chro.80498 402 AKSIDNK|WY 0.076 . Chro.80498 412 FNDDYVK|PT 0.057 . Chro.80498 415 DYVKPTR|IE 0.074 . Chro.80498 425 VLNENHK|AY 0.058 . Chro.80498 433 YLLFYYR|SD 0.093 . Chro.80498 438 YRSDFNK|YD 0.074 . Chro.80498 443 NKYDLLK|DS 0.084 . Chro.80498 454 SIESLEK|SQ 0.064 . Chro.80498 473 FINLQLK|SN 0.088 . Chro.80498 477 QLKSNSK|SS 0.070 . Chro.80498 483 KSSVNGK|NN 0.088 . Chro.80498 488 GKNNNSK|ES 0.091 . Chro.80498 508 DQLLTNK|SK 0.068 . Chro.80498 510 LLTNKSK|GE 0.064 . Chro.80498 513 NKSKGER|DL 0.163 . Chro.80498 542 QNNNNIR|LV 0.112 . Chro.80498 557 TDVNNEK|LD 0.064 . Chro.80498 561 NEKLDSK|IS 0.058 . Chro.80498 567 KISIISK|NK 0.065 . Chro.80498 569 SIISKNK|QT 0.083 . Chro.80498 573 KNKQTEK|II 0.074 . Chro.80498 576 QTEKIIK|AK 0.061 . Chro.80498 578 EKIIKAK|IC 0.080 . Chro.80498 583 AKICNFK|LR 0.061 . Chro.80498 585 ICNFKLR|SL 0.159 . Chro.80498 596 CDNWITR|SK 0.124 . Chro.80498 598 NWITRSK|SR 0.066 . Chro.80498 600 ITRSKSR|RN 0.090 . Chro.80498 601 TRSKSRR|NL 0.376 . Chro.80498 610 ATIFYLK|KL 0.059 . Chro.80498 611 TIFYLKK|LK 0.095 . Chro.80498 613 FYLKKLK|KL 0.064 . Chro.80498 614 YLKKLKK|LG 0.070 . Chro.80498 624 SMSYFIK|SK 0.106 . Chro.80498 626 SYFIKSK|SG 0.069 . Chro.80498 634 GNCLNGK|VL 0.062 . Chro.80498 642 LISNINK|SQ 0.082 . Chro.80498 666 SLEQAQK|SL 0.076 . Chro.80498 671 QKSLLAR|-- 0.133 . ____________________________^_________________

  • Fasta :-

    >Chro.80498 ATGGCTTCAATTTTAGGTCAAGAAGCTGAGAAGCGGCAAGATTCTCATCCTGTGACCCTT CAATTGTCAAATCGTCTAGTCAATTTCGTTTCTGGAGGATTTTTGGCAAACAAAACAGGT ATAGAGTCTCCTTCTTACGTTTCAGATAATTCCCAGATCTCAGATAAAACACAAAAACAC ATGGACAAATTAAAAGAAAAAGAACAAATTGAAAATAACGTTCCATTAGCAAAACCAGAA TATTATTATTTCCCTCCAGAATTACTCACTGATGCAAGAGATTTTCTTGAACCAAAAGAA ATCTCTCAGTTCAGACCATATGGTAGAGGATTAGCTAATCCTGGTTGGAATACATGTTAT TTTAATTCTATTTTACAAGCATTAACTTATGCACCTTATCTTTCAATTGATTGCTTAAGG AGGAATCACCAAAAGATTTGTAAACATATGAAAGAACATTTGGTTTGTATTATGTGTATG TTTGAAGATCATGTTAATATTATGTTGGATAATACATCCAAATCTAATATAAAAAATGAC CAACCAGTAGTTTCTAGTTTTATCAAATGTGCTCAAAAACTAATATGGAAAAGATTTAGA ATTGGAATGATGCATGATGCACAAGAATTTCTAAGGTATTTCTTAGAAGCTTTACATAAA TCTTGTTTACCTAAGAATTTACAAACTGATCAAACTTTTAGGAAAATACATCCTATTGCA GCTTCTACAACTTATATTGGTCAACTATTTTGTGGATTCTTTCTTTCTAGGATTGTATGT CATAATTGTCAATATACTTCCAATACATATGACCCATTTATGGATGTACCACTTGATATT ATGGGGGTATCGAATTTAGAAAATGCTCTCAAATTATTTACTAAAATTGAATATCTTAAA GGTGAAAATAGATATATGTGTCCAAAATGTAATCAGAGATCTGATGCTTCAAAACAACTT CTAATTGAGAAACTTCCTCCACTGTTAACAATTCAACTTAAGAGATTTAGTTATGTAGGG CATGGAAGTAGAAAACCTAACAAAGCTATCAATTTTTCAGATGTTTTAGACTTACAACCA TATATATCTTCTAAGACTTACTCTGAATCCTCTTATATTTACAAATTATGGGCTGTAGTA TGCCATTCTGGTAATACTTTATCTTGCGGTCATTATTATACCCATGCTAAGAGTATCGAC AACAAATGGTATTGCTTTAATGATGATTACGTTAAACCAACAAGAATAGAAAATGTATTA AATGAGAATCATAAGGCTTATTTGTTGTTTTACTATAGGAGTGATTTTAATAAATATGAC TTACTTAAGGATTCTGGTGTCTCCATAGAGTCCTTAGAGAAATCTCAGATCATTACTCCT TTAGCTCCTGAAATATCATTTATAAATCTTCAACTTAAATCAAACTCAAAATCTTCTGTA AATGGTAAAAATAATAATTCTAAAGAATCATCAAATTCTGAACCAAATTTGAATGAATTT TTGGATCAATTATTAACAAATAAGTCTAAAGGAGAAAGAGATTTAGCCCAAAATCAAGAT CAAGATCAATATCAAGATCCAAACTTACAATTTTATCAAAATCAACAAAATAATAACAAT ATTAGACTAGTTTTGAATCCAATAATAAATACGGATGTAAATAATGAGAAATTAGATTCA AAGATTTCTATAATATCTAAAAATAAACAAACAGAAAAGATTATTAAGGCTAAGATTTGT AATTTCAAGCTTAGATCCTTATTACTATGCGATAATTGGATTACTAGATCCAAATCAAGA AGGAATTTGGCAACCATTTTTTATCTTAAGAAATTAAAGAAACTTGGATTATCAATGAGC TACTTTATTAAATCAAAATCAGGAAATTGTTTAAATGGAAAAGTTTTGATTAGTAATATT AACAAGAGTCAAATAGACACTTGGGAAGATCTTAATTTATCCAATGATACTATTACAAGC TTGGAACAAGCTCAAAAATCTCTTCTTGCTCGTT
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  • Fasta :-

    MASILGQEAEKRQDSHPVTLQLSNRLVNFVSGGFLANKTGIESPSYVSDNSQISDKTQKH MDKLKEKEQIENNVPLAKPEYYYFPPELLTDARDFLEPKEISQFRPYGRGLANPGWNTCY FNSILQALTYAPYLSIDCLRRNHQKICKHMKEHLVCIMCMFEDHVNIMLDNTSKSNIKND QPVVSSFIKCAQKLIWKRFRIGMMHDAQEFLRYFLEALHKSCLPKNLQTDQTFRKIHPIA ASTTYIGQLFCGFFLSRIVCHNCQYTSNTYDPFMDVPLDIMGVSNLENALKLFTKIEYLK GENRYMCPKCNQRSDASKQLLIEKLPPLLTIQLKRFSYVGHGSRKPNKAINFSDVLDLQP YISSKTYSESSYIYKLWAVVCHSGNTLSCGHYYTHAKSIDNKWYCFNDDYVKPTRIENVL NENHKAYLLFYYRSDFNKYDLLKDSGVSIESLEKSQIITPLAPEISFINLQLKSNSKSSV NGKNNNSKESSNSEPNLNEFLDQLLTNKSKGERDLAQNQDQDQYQDPNLQFYQNQQNNNN IRLVLNPIINTDVNNEKLDSKISIISKNKQTEKIIKAKICNFKLRSLLLCDNWITRSKSR RNLATIFYLKKLKKLGLSMSYFIKSKSGNCLNGKVLISNINKSQIDTWEDLNLSNDTITS LEQAQKSLLAR

  • title: Active Site
  • coordinates: N113,C119,H391,D408
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
Chro.80498448 SDSGVSIESL0.994unspChro.80498448 SDSGVSIESL0.994unspChro.80498448 SDSGVSIESL0.994unspChro.80498599 STRSKSRRNL0.997unspChro.80498643 SNINKSQIDT0.994unspChro.8049854 SNSQISDKTQ0.994unspChro.80498410 YFNDDYVKPT0.992unsp

Chro.80498      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India