EDI_025110 | cysteine protease atg4, putative

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_IDPredictionOTHERSPmTPCS_Position
EDI_025110OTHER0.9997740.0002030.000023
No Results

  • Fasta :-

    >EDI_025110 MEVGSLNVIEAIALGENETEIPKKRENKKDIDEFARHTIWITYRKNMPLIKEKTTDSGWG CMIRSLQMVLAQTFLSIVLGNNWKYENNCMNTERNIFHIKSIINLFGDSTGSLFSIHRLV ARASTRGVTEGQWWGPSFASDIAAEHINEMRVFRTRGYVAKLGSIVGPKIEELSKDEVGF NPCIIFVPLRLGPESPENEFRPLLKTIFDIPQCMGMIGGKPGYAHYFHTFDGTNLYFLDP HTTQNAIDMKGDWSYQSYFCKDNKSMNYSKIDPSISLVFLVKHVNDYEHFKKSFENKTFS KLFIFKNEIEKKLNSDDFISLDDDDIDLINSI
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_025110.fa Sequence name : EDI_025110 Sequence length : 332 VALUES OF COMPUTED PARAMETERS Coef20 : 3.294 CoefTot : 0.000 ChDiff : -5 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.094 1.488 0.036 0.474 MesoH : -0.574 0.151 -0.420 0.208 MuHd_075 : 16.138 9.950 5.670 2.677 MuHd_095 : 20.477 8.393 6.143 2.659 MuHd_100 : 17.980 7.596 5.256 2.531 MuHd_105 : 12.223 7.247 3.754 2.201 Hmax_075 : 5.500 14.600 1.021 5.060 Hmax_095 : 7.100 10.675 1.012 4.400 Hmax_100 : 13.300 10.800 2.296 4.540 Hmax_105 : 5.600 10.400 0.398 4.100 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9971 0.0029 DFMC : 0.9911 0.0089
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 332 EDI_025110 MEVGSLNVIEAIALGENETEIPKKRENKKDIDEFARHTIWITYRKNMPLIKEKTTDSGWGCMIRSLQMVLAQTFLSIVLG 80 NNWKYENNCMNTERNIFHIKSIINLFGDSTGSLFSIHRLVARASTRGVTEGQWWGPSFASDIAAEHINEMRVFRTRGYVA 160 KLGSIVGPKIEELSKDEVGFNPCIIFVPLRLGPESPENEFRPLLKTIFDIPQCMGMIGGKPGYAHYFHTFDGTNLYFLDP 240 HTTQNAIDMKGDWSYQSYFCKDNKSMNYSKIDPSISLVFLVKHVNDYEHFKKSFENKTFSKLFIFKNEIEKKLNSDDFIS 320 LDDDDIDLINSI 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ............ 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_025110 23 NETEIPK|KR 0.055 . EDI_025110 24 ETEIPKK|RE 0.093 . EDI_025110 25 TEIPKKR|EN 0.240 . EDI_025110 28 PKKRENK|KD 0.152 . EDI_025110 29 KKRENKK|DI 0.218 . EDI_025110 36 DIDEFAR|HT 0.097 . EDI_025110 44 TIWITYR|KN 0.095 . EDI_025110 45 IWITYRK|NM 0.066 . EDI_025110 51 KNMPLIK|EK 0.061 . EDI_025110 53 MPLIKEK|TT 0.077 . EDI_025110 64 GWGCMIR|SL 0.175 . EDI_025110 84 VLGNNWK|YE 0.065 . EDI_025110 94 NCMNTER|NI 0.106 . EDI_025110 100 RNIFHIK|SI 0.100 . EDI_025110 118 SLFSIHR|LV 0.089 . EDI_025110 122 IHRLVAR|AS 0.132 . EDI_025110 126 VARASTR|GV 0.214 . EDI_025110 151 EHINEMR|VF 0.079 . EDI_025110 154 NEMRVFR|TR 0.314 . EDI_025110 156 MRVFRTR|GY 0.140 . EDI_025110 161 TRGYVAK|LG 0.095 . EDI_025110 169 GSIVGPK|IE 0.062 . EDI_025110 175 KIEELSK|DE 0.061 . EDI_025110 190 IIFVPLR|LG 0.073 . EDI_025110 201 SPENEFR|PL 0.114 . EDI_025110 205 EFRPLLK|TI 0.089 . EDI_025110 220 MGMIGGK|PG 0.065 . EDI_025110 250 QNAIDMK|GD 0.071 . EDI_025110 261 YQSYFCK|DN 0.083 . EDI_025110 264 YFCKDNK|SM 0.071 . EDI_025110 270 KSMNYSK|ID 0.061 . EDI_025110 282 SLVFLVK|HV 0.101 . EDI_025110 291 NDYEHFK|KS 0.066 . EDI_025110 292 DYEHFKK|SF 0.180 . EDI_025110 297 KKSFENK|TF 0.090 . EDI_025110 301 ENKTFSK|LF 0.061 . EDI_025110 306 SKLFIFK|NE 0.060 . EDI_025110 311 FKNEIEK|KL 0.061 . EDI_025110 312 KNEIEKK|LN 0.120 . ____________________________^_________________

  • Fasta :-

    >EDI_025110 ATGGAAGTTGGCTCTTTAAATGTAATTGAAGCTATTGCCTTGGGAGAAAATGAAACTGAA ATTCCTAAAAAACGAGAGAATAAAAAAGATATTGATGAATTTGCAAGACATACTATTTGG ATTACATACAGAAAAAATATGCCATTAATTAAAGAAAAAACTACAGACTCAGGATGGGGA TGTATGATTCGATCATTACAAATGGTACTTGCACAAACATTTCTTTCAATTGTTCTTGGA AATAATTGGAAATATGAAAATAATTGTATGAATACAGAAAGAAATATTTTTCATATAAAA TCAATTATTAATTTGTTTGGAGATTCAACTGGAAGTTTATTTTCTATTCACAGATTAGTT GCAAGAGCATCTACAAGGGGAGTTACTGAAGGACAATGGTGGGGACCATCATTTGCTTCT GATATAGCTGCAGAACACATTAATGAGATGAGAGTCTTTAGAACACGTGGGTATGTTGCT AAATTAGGAAGTATTGTTGGACCGAAGATTGAAGAGTTGAGTAAAGATGAAGTAGGATTT AATCCATGTATAATATTTGTTCCATTACGACTTGGTCCAGAATCACCTGAAAATGAATTT AGACCATTATTAAAAACAATTTTTGATATTCCACAATGTATGGGAATGATTGGTGGAAAA CCAGGATATGCTCATTACTTCCATACATTTGATGGAACTAATTTATACTTTCTTGATCCT CATACTACACAAAATGCAATTGATATGAAAGGAGATTGGTCATATCAAAGTTACTTTTGT AAAGATAATAAAAGTATGAATTATTCTAAGATAGATCCATCAATATCATTAGTATTTCTA GTTAAACATGTTAATGACTATGAACATTTCAAGAAATCATTTGAAAACAAAACATTTTCT AAATTATTTATATTTAAAAATGAAATAGAGAAAAAATTAAATTCAGATGATTTTATATCA TTAGATGATGATGATATTGATTTAATTAATTCAATATGA
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  • Fasta :-

    MEVGSLNVIEAIALGENETEIPKKRENKKDIDEFARHTIWITYRKNMPLIKEKTTDSGWG CMIRSLQMVLAQTFLSIVLGNNWKYENNCMNTERNIFHIKSIINLFGDSTGSLFSIHRLV ARASTRGVTEGQWWGPSFASDIAAEHINEMRVFRTRGYVAKLGSIVGPKIEELSKDEVGF NPCIIFVPLRLGPESPENEFRPLLKTIFDIPQCMGMIGGKPGYAHYFHTFDGTNLYFLDP HTTQNAIDMKGDWSYQSYFCKDNKSMNYSKIDPSISLVFLVKHVNDYEHFKKSFENKTFS KLFIFKNEIEKKLNSDDFISLDDDDIDLINSI

    No Results
No Results
No Results
IDSitePeptideScoreMethod
EDI_025110195 SLGPESPENE0.997unsp

EDI_025110      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India